Taxonomic assignment of 16S rRNA sequences based on Fourier analysis

We introduce TAXOFOR a novel machine learning classifier using Random Forests to assign taxonomy to paired-end sequencing amplicons up to genus level, trained with annotated sequences from the Green-Genes database. It performs this task with a confidence close to 98% in terms of its accuracy, and it...

Full description

Autores:
Luque y Guzmán Sáenz, Guillermo Gustavo
Tipo de recurso:
Fecha de publicación:
2016
Institución:
Universidad de los Andes
Repositorio:
Séneca: repositorio Uniandes
Idioma:
eng
OAI Identifier:
oai:repositorio.uniandes.edu.co:1992/13692
Acceso en línea:
http://hdl.handle.net/1992/13692
Palabra clave:
Metagenómica
ADN ribosómico
Biología computacional
Biología
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-sa/4.0/