Taxonomic assignment of 16S rRNA sequences based on Fourier analysis
We introduce TAXOFOR a novel machine learning classifier using Random Forests to assign taxonomy to paired-end sequencing amplicons up to genus level, trained with annotated sequences from the Green-Genes database. It performs this task with a confidence close to 98% in terms of its accuracy, and it...
- Autores:
-
Luque y Guzmán Sáenz, Guillermo Gustavo
- Tipo de recurso:
- Fecha de publicación:
- 2016
- Institución:
- Universidad de los Andes
- Repositorio:
- Séneca: repositorio Uniandes
- Idioma:
- eng
- OAI Identifier:
- oai:repositorio.uniandes.edu.co:1992/13692
- Acceso en línea:
- http://hdl.handle.net/1992/13692
- Palabra clave:
- Metagenómica
ADN ribosómico
Biología computacional
Biología
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-sa/4.0/