Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi

ABSTRACT: Proteins associated to the PI3K/AKT/mTOR signaling pathway are widely used targets for cancer treatment, and in recent years they have also been evaluated as putative targets in trypanosomatids parasites, such as Trypanosoma cruzi. Here, we performed a virtual screening approach to find ca...

Full description

Autores:
Ochoa de Ossa, Rodrigo Alonso
Rocha Roa, Cristian
Marín Villa, Marcel
Robledo Restrepo, Sara María
Varela Miranda, Rubén Eduardo
Tipo de recurso:
Article of investigation
Fecha de publicación:
2018
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/32013
Acceso en línea:
https://hdl.handle.net/10495/32013
Palabra clave:
Trypanosoma cruzi
Dominios Homólogos a Pleckstrina
Pleckstrin Homology Domains
Descubrimiento de Drogas
Drug Discovery
Proteínas Proto-Oncogénicas c-akt
Proto-Oncogene Proteins c-akt
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
id UDEA2_0138e9a394752417aab33a67606e03de
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/32013
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
title Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
spellingShingle Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
Trypanosoma cruzi
Dominios Homólogos a Pleckstrina
Pleckstrin Homology Domains
Descubrimiento de Drogas
Drug Discovery
Proteínas Proto-Oncogénicas c-akt
Proto-Oncogene Proteins c-akt
title_short Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
title_full Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
title_fullStr Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
title_full_unstemmed Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
title_sort Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi
dc.creator.fl_str_mv Ochoa de Ossa, Rodrigo Alonso
Rocha Roa, Cristian
Marín Villa, Marcel
Robledo Restrepo, Sara María
Varela Miranda, Rubén Eduardo
dc.contributor.author.none.fl_str_mv Ochoa de Ossa, Rodrigo Alonso
Rocha Roa, Cristian
Marín Villa, Marcel
Robledo Restrepo, Sara María
Varela Miranda, Rubén Eduardo
dc.subject.decs.none.fl_str_mv Trypanosoma cruzi
Dominios Homólogos a Pleckstrina
Pleckstrin Homology Domains
Descubrimiento de Drogas
Drug Discovery
Proteínas Proto-Oncogénicas c-akt
Proto-Oncogene Proteins c-akt
topic Trypanosoma cruzi
Dominios Homólogos a Pleckstrina
Pleckstrin Homology Domains
Descubrimiento de Drogas
Drug Discovery
Proteínas Proto-Oncogénicas c-akt
Proto-Oncogene Proteins c-akt
description ABSTRACT: Proteins associated to the PI3K/AKT/mTOR signaling pathway are widely used targets for cancer treatment, and in recent years they have also been evaluated as putative targets in trypanosomatids parasites, such as Trypanosoma cruzi. Here, we performed a virtual screening approach to find candidates that can bind regions on or near the Pleckstrin homology domain of an AKT-like protein in T. cruzi. The compounds were also evaluated in vitro. The in silico and experimental results allowed us to identify a set of compounds that can potentially alter the intracellular signaling pathway through the AKT-like kinase of the parasite; among them, a derivative of the pyrazolopyridine nucleus with an IC50 of 14.25 ± 1.00 µM against amastigotes of T. cruzi. In addition, we built a protein–protein interaction network of T. cruzi to understand the role of the AKT-like protein in the parasite, and look for additional proteins that can be postulated as possible novel molecular targets for the rational design of compounds against T. cruzi.
publishDate 2018
dc.date.issued.none.fl_str_mv 2018
dc.date.accessioned.none.fl_str_mv 2022-11-13T18:31:44Z
dc.date.available.none.fl_str_mv 2022-11-13T18:31:44Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.citation.spa.fl_str_mv Ochoa R, Rocha-Roa C, Marín-Villa M, Robledo SM, Varela-M RE. Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi. Int J Mol Sci. 2018 Dec 8;19(12):3951. doi: 10.3390/ijms19123951.
dc.identifier.issn.none.fl_str_mv 1661-6596
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/32013
dc.identifier.doi.none.fl_str_mv 10.3390/ijms19123951
dc.identifier.eissn.none.fl_str_mv 1422-0067
identifier_str_mv Ochoa R, Rocha-Roa C, Marín-Villa M, Robledo SM, Varela-M RE. Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi. Int J Mol Sci. 2018 Dec 8;19(12):3951. doi: 10.3390/ijms19123951.
1661-6596
10.3390/ijms19123951
1422-0067
url https://hdl.handle.net/10495/32013
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Int. J. Mol. Sci.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/2.5/co/
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dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/2.5/co/
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dc.publisher.spa.fl_str_mv MDPI (Multidisciplinary Digital Publishing Institute)
dc.publisher.group.spa.fl_str_mv Programa de Estudio y Control de Enfermedades Tropicales (PECET)
dc.publisher.place.spa.fl_str_mv Basilea, Suiza
institution Universidad de Antioquia
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spelling Ochoa de Ossa, Rodrigo AlonsoRocha Roa, CristianMarín Villa, MarcelRobledo Restrepo, Sara MaríaVarela Miranda, Rubén Eduardo2022-11-13T18:31:44Z2022-11-13T18:31:44Z2018Ochoa R, Rocha-Roa C, Marín-Villa M, Robledo SM, Varela-M RE. Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruzi. Int J Mol Sci. 2018 Dec 8;19(12):3951. doi: 10.3390/ijms19123951.1661-6596https://hdl.handle.net/10495/3201310.3390/ijms191239511422-0067ABSTRACT: Proteins associated to the PI3K/AKT/mTOR signaling pathway are widely used targets for cancer treatment, and in recent years they have also been evaluated as putative targets in trypanosomatids parasites, such as Trypanosoma cruzi. Here, we performed a virtual screening approach to find candidates that can bind regions on or near the Pleckstrin homology domain of an AKT-like protein in T. cruzi. The compounds were also evaluated in vitro. The in silico and experimental results allowed us to identify a set of compounds that can potentially alter the intracellular signaling pathway through the AKT-like kinase of the parasite; among them, a derivative of the pyrazolopyridine nucleus with an IC50 of 14.25 ± 1.00 µM against amastigotes of T. cruzi. In addition, we built a protein–protein interaction network of T. cruzi to understand the role of the AKT-like protein in the parasite, and look for additional proteins that can be postulated as possible novel molecular targets for the rational design of compounds against T. cruzi.COL001509915application/pdfengMDPI (Multidisciplinary Digital Publishing Institute)Programa de Estudio y Control de Enfermedades Tropicales (PECET)Basilea, Suizainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by/4.0/Search of Allosteric Inhibitors and Associated Proteins of an AKT-like Kinase from Trypanosoma cruziTrypanosoma cruziDominios Homólogos a PleckstrinaPleckstrin Homology DomainsDescubrimiento de DrogasDrug DiscoveryProteínas Proto-Oncogénicas c-aktProto-Oncogene Proteins c-aktInt. J. Mol. Sci.International Journal of Molecular Sciences11519ORIGINALRobledoSara_2018_AllostericTrypanosomaCruzi.pdfRobledoSara_2018_AllostericTrypanosomaCruzi.pdfArtículo de investigaciónapplication/pdf6444684https://bibliotecadigital.udea.edu.co/bitstream/10495/32013/1/RobledoSara_2018_AllostericTrypanosomaCruzi.pdf1b8a19ec42338bdaf410377cbdc0882fMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstream/10495/32013/2/license_rdf1646d1f6b96dbbbc38035efc9239ac9cMD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/32013/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/32013oai:bibliotecadigital.udea.edu.co:10495/320132022-11-13 13:31:45.037Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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