Unsupervised fuzzy binning of metagenomic sequence fragments on three-dimensional Barnes-Hut t-Stochastic Neighbor Embeddings

Shotgun metagenomic studies attempt to reconstruct population genome sequences from complex microbial communities. In some traditional genome demarcation approaches, high-dimensional sequence data are embedded into two-dimensional spaces and subsequently binned into candidate genomic populations. On...

Full description

Autores:
Ariza-Jimenez L.
Quintero O.L.
Pinel N.
Tipo de recurso:
Fecha de publicación:
2018
Institución:
Universidad EAFIT
Repositorio:
Repositorio EAFIT
Idioma:
eng
OAI Identifier:
oai:repository.eafit.edu.co:10784/26744
Acceso en línea:
https://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=8480
http://hdl.handle.net/10784/26744
Palabra clave:
algorithm
cluster
analysis
DNA
sequence
genomics
metagenome
metagenomics
Algorithms
Cluster
Analysis
Genomics
Metagenome
Metagenomics
Sequence
Analysis,
DNA
Rights
License
Institute of Electrical and Electronics Engineers Inc.