IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses

Existing workflows for the analysis of multi-omic microbiome datasets are lab-specific and often result in sub-optimal data usage. Here we present IMP, a reproducible and modular pipeline for the integrated and reference-independent analysis of coupled metagenomic and metatranscriptomic data. IMP in...

Full description

Autores:

Narayanasamy, S.
Jarosz, Y.
Muller, E.E.L.
Heintz-Buschart, A.
Herold, M.
Kaysen, A.
Laczny, C.C.
Pinel, N.
May, P.
Wilmes, P.

Tipo de recurso:

Fecha de publicación:

2016

Institución:

Universidad EAFIT

Repositorio:

Repositorio EAFIT

Idioma:

eng

OAI Identifier:

oai:repository.eafit.edu.co:10784/26733

Acceso en línea:

https://eafit.fundanetsuite.com/Publicaciones/ProdCientif/PublicacionFrw.aspx?id=6197
http://hdl.handle.net/10784/26733

Palabra clave:

Multi-omics
data
integration
Metagenomics
Metatranscriptomics
Microbial
ecology
Microbiome
Reproducibility

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License

https://v2.sherpa.ac.uk/id/publication/issn/1474-760X