Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
The prefrontal cortex (PFC) is one of the brain regions with more prominent changes in human aging. The molecular processes related to the cognitive decline and mood changes during aging are not completely understood. To improve our knowledge, we integrated transcriptomic data of four studies of hum...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2018
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/23603
- Acceso en línea:
- https://doi.org/10.3390/brainsci8120227
https://repository.urosario.edu.co/handle/10336/23603
- Palabra clave:
- 4 aminobutyric acid
Alpha interferon
Beta interferon
Cadmium
Cell protein
Cyclic gmp
Ezrin
Glutamic acid
Interferon
Metallothionein i
Moesin
Oxytocin
Radixin
Sonic hedgehog protein
Transcription factor gli1
Transcriptional activator gli3
Transient receptor potential channel
Zinc finger protein gli2
Adult
Aged
Aging
Article
Astrocyte
Astrocytosis
Comparative study
Down regulation
Gene expression
Gene expression profiling
Genetic analysis
Human
Meta analysis
Molecular biology
Neuroprotection
Phenotypic variation
Prefrontal cortex
Transcriptomics
Upregulation
Meta-analysis of transcriptomic
Prefrontal cortex aging
Reactive astrogliosis
Synapsis aging
- Rights
- License
- Abierto (Texto Completo)
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76327233600518662516002b65f513-6f3c-4fec-bbcc-73e8e7469c2e524237316002020-05-26T00:03:33Z2020-05-26T00:03:33Z2018The prefrontal cortex (PFC) is one of the brain regions with more prominent changes in human aging. The molecular processes related to the cognitive decline and mood changes during aging are not completely understood. To improve our knowledge, we integrated transcriptomic data of four studies of human PFC from elderly people (58–80 years old) compared with younger people (20–40 years old) using a meta-analytic approximation combined with molecular signature analysis. We identified 1817 differentially expressed genes, 561 up-regulated and 1256 down-regulated. Pathway analysis revealed down-regulation of synaptic genes with conservation of gene expression of other neuronal regions. Additionally, we identified up-regulation of markers of astrogliosis with transcriptomic signature compatible with A1 neurotoxic astrocytes and A2 neuroprotective astrocytes. Response to interferon is related to A1 astrocytes and the A2 phenotype is mediated in aging by activation of sonic hedgehog (SHH) pathway and up-regulation of metallothioneins I and genes of the family ERM (ezrin, radixin, and moesin). The main conclusions of our study are the confirmation of a global dysfunction of the synapses in the aged PFC and the evidence of opposite phenotypes of astrogliosis in the aging brain, which we report for the first time in the present article. © 2018 by the authors. Licensee MDPI, Basel, Switzerland.application/pdfhttps://doi.org/10.3390/brainsci812022720763425https://repository.urosario.edu.co/handle/10336/23603engMDPI AGNo. 12Brain SciencesVol. 8Brain Sciences, ISSN:20763425, Vol.8, No.12 (2018)https://www.scopus.com/inward/record.uri?eid=2-s2.0-85070198338&doi=10.3390%2fbrainsci8120227&partnerID=40&md5=37576ea462ceef64c90ebb1db3b899cdAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocUR4 aminobutyric acidAlpha interferonBeta interferonCadmiumCell proteinCyclic gmpEzrinGlutamic acidInterferonMetallothionein iMoesinOxytocinRadixinSonic hedgehog proteinTranscription factor gli1Transcriptional activator gli3Transient receptor potential channelZinc finger protein gli2AdultAgedAgingArticleAstrocyteAstrocytosisComparative studyDown regulationGene expressionGene expression profilingGenetic analysisHumanMeta analysisMolecular biologyNeuroprotectionPhenotypic variationPrefrontal cortexTranscriptomicsUpregulationMeta-analysis of transcriptomicPrefrontal cortex agingReactive astrogliosisSynapsis agingIntegrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortexarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Payan-Gomez, CesarRamírez Clavijo, Sandra RocíoRodríguez, DiegoAmador Muñoz, Diana Patricia10336/23603oai:repository.urosario.edu.co:10336/236032022-05-02 07:37:13.66414https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |
dc.title.spa.fl_str_mv |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
title |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
spellingShingle |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex 4 aminobutyric acid Alpha interferon Beta interferon Cadmium Cell protein Cyclic gmp Ezrin Glutamic acid Interferon Metallothionein i Moesin Oxytocin Radixin Sonic hedgehog protein Transcription factor gli1 Transcriptional activator gli3 Transient receptor potential channel Zinc finger protein gli2 Adult Aged Aging Article Astrocyte Astrocytosis Comparative study Down regulation Gene expression Gene expression profiling Genetic analysis Human Meta analysis Molecular biology Neuroprotection Phenotypic variation Prefrontal cortex Transcriptomics Upregulation Meta-analysis of transcriptomic Prefrontal cortex aging Reactive astrogliosis Synapsis aging |
title_short |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
title_full |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
title_fullStr |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
title_full_unstemmed |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
title_sort |
Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex |
dc.subject.keyword.spa.fl_str_mv |
4 aminobutyric acid Alpha interferon Beta interferon Cadmium Cell protein Cyclic gmp Ezrin Glutamic acid Interferon Metallothionein i Moesin Oxytocin Radixin Sonic hedgehog protein Transcription factor gli1 Transcriptional activator gli3 Transient receptor potential channel Zinc finger protein gli2 Adult Aged Aging Article Astrocyte Astrocytosis Comparative study Down regulation Gene expression Gene expression profiling Genetic analysis Human Meta analysis Molecular biology Neuroprotection Phenotypic variation Prefrontal cortex Transcriptomics Upregulation Meta-analysis of transcriptomic Prefrontal cortex aging Reactive astrogliosis Synapsis aging |
topic |
4 aminobutyric acid Alpha interferon Beta interferon Cadmium Cell protein Cyclic gmp Ezrin Glutamic acid Interferon Metallothionein i Moesin Oxytocin Radixin Sonic hedgehog protein Transcription factor gli1 Transcriptional activator gli3 Transient receptor potential channel Zinc finger protein gli2 Adult Aged Aging Article Astrocyte Astrocytosis Comparative study Down regulation Gene expression Gene expression profiling Genetic analysis Human Meta analysis Molecular biology Neuroprotection Phenotypic variation Prefrontal cortex Transcriptomics Upregulation Meta-analysis of transcriptomic Prefrontal cortex aging Reactive astrogliosis Synapsis aging |
description |
The prefrontal cortex (PFC) is one of the brain regions with more prominent changes in human aging. The molecular processes related to the cognitive decline and mood changes during aging are not completely understood. To improve our knowledge, we integrated transcriptomic data of four studies of human PFC from elderly people (58–80 years old) compared with younger people (20–40 years old) using a meta-analytic approximation combined with molecular signature analysis. We identified 1817 differentially expressed genes, 561 up-regulated and 1256 down-regulated. Pathway analysis revealed down-regulation of synaptic genes with conservation of gene expression of other neuronal regions. Additionally, we identified up-regulation of markers of astrogliosis with transcriptomic signature compatible with A1 neurotoxic astrocytes and A2 neuroprotective astrocytes. Response to interferon is related to A1 astrocytes and the A2 phenotype is mediated in aging by activation of sonic hedgehog (SHH) pathway and up-regulation of metallothioneins I and genes of the family ERM (ezrin, radixin, and moesin). The main conclusions of our study are the confirmation of a global dysfunction of the synapses in the aged PFC and the evidence of opposite phenotypes of astrogliosis in the aging brain, which we report for the first time in the present article. © 2018 by the authors. Licensee MDPI, Basel, Switzerland. |
publishDate |
2018 |
dc.date.created.spa.fl_str_mv |
2018 |
dc.date.accessioned.none.fl_str_mv |
2020-05-26T00:03:33Z |
dc.date.available.none.fl_str_mv |
2020-05-26T00:03:33Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.3390/brainsci8120227 |
dc.identifier.issn.none.fl_str_mv |
20763425 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/23603 |
url |
https://doi.org/10.3390/brainsci8120227 https://repository.urosario.edu.co/handle/10336/23603 |
identifier_str_mv |
20763425 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationIssue.none.fl_str_mv |
No. 12 |
dc.relation.citationTitle.none.fl_str_mv |
Brain Sciences |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 8 |
dc.relation.ispartof.spa.fl_str_mv |
Brain Sciences, ISSN:20763425, Vol.8, No.12 (2018) |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85070198338&doi=10.3390%2fbrainsci8120227&partnerID=40&md5=37576ea462ceef64c90ebb1db3b899cd |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
MDPI AG |
institution |
Universidad del Rosario |
dc.source.instname.spa.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
_version_ |
1814167715931226112 |