Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex

The prefrontal cortex (PFC) is one of the brain regions with more prominent changes in human aging. The molecular processes related to the cognitive decline and mood changes during aging are not completely understood. To improve our knowledge, we integrated transcriptomic data of four studies of hum...

Full description

Autores:
Tipo de recurso:
Fecha de publicación:
2018
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/23603
Acceso en línea:
https://doi.org/10.3390/brainsci8120227
https://repository.urosario.edu.co/handle/10336/23603
Palabra clave:
4 aminobutyric acid
Alpha interferon
Beta interferon
Cadmium
Cell protein
Cyclic gmp
Ezrin
Glutamic acid
Interferon
Metallothionein i
Moesin
Oxytocin
Radixin
Sonic hedgehog protein
Transcription factor gli1
Transcriptional activator gli3
Transient receptor potential channel
Zinc finger protein gli2
Adult
Aged
Aging
Article
Astrocyte
Astrocytosis
Comparative study
Down regulation
Gene expression
Gene expression profiling
Genetic analysis
Human
Meta analysis
Molecular biology
Neuroprotection
Phenotypic variation
Prefrontal cortex
Transcriptomics
Upregulation
Meta-analysis of transcriptomic
Prefrontal cortex aging
Reactive astrogliosis
Synapsis aging
Rights
License
Abierto (Texto Completo)
id EDOCUR2_fd12b5f4177479279b9a74407a62d5d0
oai_identifier_str oai:repository.urosario.edu.co:10336/23603
network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
spelling 76327233600518662516002b65f513-6f3c-4fec-bbcc-73e8e7469c2e524237316002020-05-26T00:03:33Z2020-05-26T00:03:33Z2018The prefrontal cortex (PFC) is one of the brain regions with more prominent changes in human aging. The molecular processes related to the cognitive decline and mood changes during aging are not completely understood. To improve our knowledge, we integrated transcriptomic data of four studies of human PFC from elderly people (58–80 years old) compared with younger people (20–40 years old) using a meta-analytic approximation combined with molecular signature analysis. We identified 1817 differentially expressed genes, 561 up-regulated and 1256 down-regulated. Pathway analysis revealed down-regulation of synaptic genes with conservation of gene expression of other neuronal regions. Additionally, we identified up-regulation of markers of astrogliosis with transcriptomic signature compatible with A1 neurotoxic astrocytes and A2 neuroprotective astrocytes. Response to interferon is related to A1 astrocytes and the A2 phenotype is mediated in aging by activation of sonic hedgehog (SHH) pathway and up-regulation of metallothioneins I and genes of the family ERM (ezrin, radixin, and moesin). The main conclusions of our study are the confirmation of a global dysfunction of the synapses in the aged PFC and the evidence of opposite phenotypes of astrogliosis in the aging brain, which we report for the first time in the present article. © 2018 by the authors. Licensee MDPI, Basel, Switzerland.application/pdfhttps://doi.org/10.3390/brainsci812022720763425https://repository.urosario.edu.co/handle/10336/23603engMDPI AGNo. 12Brain SciencesVol. 8Brain Sciences, ISSN:20763425, Vol.8, No.12 (2018)https://www.scopus.com/inward/record.uri?eid=2-s2.0-85070198338&doi=10.3390%2fbrainsci8120227&partnerID=40&md5=37576ea462ceef64c90ebb1db3b899cdAbierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocUR4 aminobutyric acidAlpha interferonBeta interferonCadmiumCell proteinCyclic gmpEzrinGlutamic acidInterferonMetallothionein iMoesinOxytocinRadixinSonic hedgehog proteinTranscription factor gli1Transcriptional activator gli3Transient receptor potential channelZinc finger protein gli2AdultAgedAgingArticleAstrocyteAstrocytosisComparative studyDown regulationGene expressionGene expression profilingGenetic analysisHumanMeta analysisMolecular biologyNeuroprotectionPhenotypic variationPrefrontal cortexTranscriptomicsUpregulationMeta-analysis of transcriptomicPrefrontal cortex agingReactive astrogliosisSynapsis agingIntegrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortexarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Payan-Gomez, CesarRamírez Clavijo, Sandra RocíoRodríguez, DiegoAmador Muñoz, Diana Patricia10336/23603oai:repository.urosario.edu.co:10336/236032022-05-02 07:37:13.66414https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
title Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
spellingShingle Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
4 aminobutyric acid
Alpha interferon
Beta interferon
Cadmium
Cell protein
Cyclic gmp
Ezrin
Glutamic acid
Interferon
Metallothionein i
Moesin
Oxytocin
Radixin
Sonic hedgehog protein
Transcription factor gli1
Transcriptional activator gli3
Transient receptor potential channel
Zinc finger protein gli2
Adult
Aged
Aging
Article
Astrocyte
Astrocytosis
Comparative study
Down regulation
Gene expression
Gene expression profiling
Genetic analysis
Human
Meta analysis
Molecular biology
Neuroprotection
Phenotypic variation
Prefrontal cortex
Transcriptomics
Upregulation
Meta-analysis of transcriptomic
Prefrontal cortex aging
Reactive astrogliosis
Synapsis aging
title_short Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
title_full Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
title_fullStr Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
title_full_unstemmed Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
title_sort Integrative analysis of global gene expression identifies opposite patterns of reactive astrogliosis in aged human prefrontal cortex
dc.subject.keyword.spa.fl_str_mv 4 aminobutyric acid
Alpha interferon
Beta interferon
Cadmium
Cell protein
Cyclic gmp
Ezrin
Glutamic acid
Interferon
Metallothionein i
Moesin
Oxytocin
Radixin
Sonic hedgehog protein
Transcription factor gli1
Transcriptional activator gli3
Transient receptor potential channel
Zinc finger protein gli2
Adult
Aged
Aging
Article
Astrocyte
Astrocytosis
Comparative study
Down regulation
Gene expression
Gene expression profiling
Genetic analysis
Human
Meta analysis
Molecular biology
Neuroprotection
Phenotypic variation
Prefrontal cortex
Transcriptomics
Upregulation
Meta-analysis of transcriptomic
Prefrontal cortex aging
Reactive astrogliosis
Synapsis aging
topic 4 aminobutyric acid
Alpha interferon
Beta interferon
Cadmium
Cell protein
Cyclic gmp
Ezrin
Glutamic acid
Interferon
Metallothionein i
Moesin
Oxytocin
Radixin
Sonic hedgehog protein
Transcription factor gli1
Transcriptional activator gli3
Transient receptor potential channel
Zinc finger protein gli2
Adult
Aged
Aging
Article
Astrocyte
Astrocytosis
Comparative study
Down regulation
Gene expression
Gene expression profiling
Genetic analysis
Human
Meta analysis
Molecular biology
Neuroprotection
Phenotypic variation
Prefrontal cortex
Transcriptomics
Upregulation
Meta-analysis of transcriptomic
Prefrontal cortex aging
Reactive astrogliosis
Synapsis aging
description The prefrontal cortex (PFC) is one of the brain regions with more prominent changes in human aging. The molecular processes related to the cognitive decline and mood changes during aging are not completely understood. To improve our knowledge, we integrated transcriptomic data of four studies of human PFC from elderly people (58–80 years old) compared with younger people (20–40 years old) using a meta-analytic approximation combined with molecular signature analysis. We identified 1817 differentially expressed genes, 561 up-regulated and 1256 down-regulated. Pathway analysis revealed down-regulation of synaptic genes with conservation of gene expression of other neuronal regions. Additionally, we identified up-regulation of markers of astrogliosis with transcriptomic signature compatible with A1 neurotoxic astrocytes and A2 neuroprotective astrocytes. Response to interferon is related to A1 astrocytes and the A2 phenotype is mediated in aging by activation of sonic hedgehog (SHH) pathway and up-regulation of metallothioneins I and genes of the family ERM (ezrin, radixin, and moesin). The main conclusions of our study are the confirmation of a global dysfunction of the synapses in the aged PFC and the evidence of opposite phenotypes of astrogliosis in the aging brain, which we report for the first time in the present article. © 2018 by the authors. Licensee MDPI, Basel, Switzerland.
publishDate 2018
dc.date.created.spa.fl_str_mv 2018
dc.date.accessioned.none.fl_str_mv 2020-05-26T00:03:33Z
dc.date.available.none.fl_str_mv 2020-05-26T00:03:33Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.3390/brainsci8120227
dc.identifier.issn.none.fl_str_mv 20763425
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/23603
url https://doi.org/10.3390/brainsci8120227
https://repository.urosario.edu.co/handle/10336/23603
identifier_str_mv 20763425
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationIssue.none.fl_str_mv No. 12
dc.relation.citationTitle.none.fl_str_mv Brain Sciences
dc.relation.citationVolume.none.fl_str_mv Vol. 8
dc.relation.ispartof.spa.fl_str_mv Brain Sciences, ISSN:20763425, Vol.8, No.12 (2018)
dc.relation.uri.spa.fl_str_mv https://www.scopus.com/inward/record.uri?eid=2-s2.0-85070198338&doi=10.3390%2fbrainsci8120227&partnerID=40&md5=37576ea462ceef64c90ebb1db3b899cd
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv MDPI AG
institution Universidad del Rosario
dc.source.instname.spa.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
_version_ 1814167715931226112