Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
Objectives Systemic lupus erythematosus (SLE; OMIM 152700) is characterised by the production of antibodies to nuclear antigens. We previously identified variants in complement receptor 2 (CR2/CD21) that were associated with decreased risk of SLE. This study aimed to identify the causal variant for...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2016
- Institución:
- Universidad del Rosario
- Repositorio:
- Repositorio EdocUR - U. Rosario
- Idioma:
- eng
- OAI Identifier:
- oai:repository.urosario.edu.co:10336/22444
- Acceso en línea:
- https://doi.org/10.1136/annrheumdis-2014-205584
https://repository.urosario.edu.co/handle/10336/22444
- Palabra clave:
- Complement component C3b receptor
Complement receptor
Complement receptor 2
Double stranded DNA antibody
Messenger RNA
Transcription factor CTCF
Unclassified drug
Antinuclear antibody
Complement component C3b receptor
Complement component C3d receptor
CR1 protein, human
DNA
Transcription factor
Allele
Article
B lymphocyte
Case control study
Chromatin immunoprecipitation
Controlled study
DNA protein complex
Flow cytometry
Gel mobility shift assay
Genetic association
Genetic variability
Genotype
Human
Intron
Major clinical study
Pathogenesis
Priority journal
Real time polymerase chain reaction
Systemic lupus erythematosus
Adolescent
Adult
Biosynthesis
Blood
Genetic predisposition
Genetic variation
Genetics
Haplotype
Immunology
Metabolism
Middle aged
Phenotype
Procedures
Risk assessment
Single nucleotide polymorphism
Systemic lupus erythematosus
Young adult
Adolescent
Adult
B-Lymphocyte Subsets
Case-Control Studies
DNA
Genetic Predisposition to Disease
Genetic Variation
Genotype
Haplotypes
Humans
Middle Aged
Phenotype
Receptors, Complement 3d
Risk Assessment
Transcription Factors
Young Adult
Systemic
Antinuclear
Single Nucleotide
Antibodies
Lupus Erythematosus
Polymorphism
- Rights
- License
- Abierto (Texto Completo)
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EDOCUR2 |
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Repositorio EdocUR - U. Rosario |
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|
dc.title.spa.fl_str_mv |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
title |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
spellingShingle |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA Complement component C3b receptor Complement receptor Complement receptor 2 Double stranded DNA antibody Messenger RNA Transcription factor CTCF Unclassified drug Antinuclear antibody Complement component C3b receptor Complement component C3d receptor CR1 protein, human DNA Transcription factor Allele Article B lymphocyte Case control study Chromatin immunoprecipitation Controlled study DNA protein complex Flow cytometry Gel mobility shift assay Genetic association Genetic variability Genotype Human Intron Major clinical study Pathogenesis Priority journal Real time polymerase chain reaction Systemic lupus erythematosus Adolescent Adult Biosynthesis Blood Genetic predisposition Genetic variation Genetics Haplotype Immunology Metabolism Middle aged Phenotype Procedures Risk assessment Single nucleotide polymorphism Systemic lupus erythematosus Young adult Adolescent Adult B-Lymphocyte Subsets Case-Control Studies DNA Genetic Predisposition to Disease Genetic Variation Genotype Haplotypes Humans Middle Aged Phenotype Receptors, Complement 3d Risk Assessment Transcription Factors Young Adult Systemic Antinuclear Single Nucleotide Antibodies Lupus Erythematosus Polymorphism |
title_short |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
title_full |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
title_fullStr |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
title_full_unstemmed |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
title_sort |
Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA |
dc.subject.keyword.spa.fl_str_mv |
Complement component C3b receptor Complement receptor Complement receptor 2 Double stranded DNA antibody Messenger RNA Transcription factor CTCF Unclassified drug Antinuclear antibody Complement component C3b receptor Complement component C3d receptor CR1 protein, human DNA Transcription factor Allele Article B lymphocyte Case control study Chromatin immunoprecipitation Controlled study DNA protein complex Flow cytometry Gel mobility shift assay Genetic association Genetic variability Genotype Human Intron Major clinical study Pathogenesis Priority journal Real time polymerase chain reaction Systemic lupus erythematosus Adolescent Adult Biosynthesis Blood Genetic predisposition Genetic variation Genetics Haplotype Immunology Metabolism Middle aged Phenotype Procedures Risk assessment Single nucleotide polymorphism Systemic lupus erythematosus Young adult Adolescent Adult B-Lymphocyte Subsets Case-Control Studies DNA Genetic Predisposition to Disease Genetic Variation Genotype Haplotypes Humans Middle Aged Phenotype Receptors, Complement 3d Risk Assessment Transcription Factors Young Adult |
topic |
Complement component C3b receptor Complement receptor Complement receptor 2 Double stranded DNA antibody Messenger RNA Transcription factor CTCF Unclassified drug Antinuclear antibody Complement component C3b receptor Complement component C3d receptor CR1 protein, human DNA Transcription factor Allele Article B lymphocyte Case control study Chromatin immunoprecipitation Controlled study DNA protein complex Flow cytometry Gel mobility shift assay Genetic association Genetic variability Genotype Human Intron Major clinical study Pathogenesis Priority journal Real time polymerase chain reaction Systemic lupus erythematosus Adolescent Adult Biosynthesis Blood Genetic predisposition Genetic variation Genetics Haplotype Immunology Metabolism Middle aged Phenotype Procedures Risk assessment Single nucleotide polymorphism Systemic lupus erythematosus Young adult Adolescent Adult B-Lymphocyte Subsets Case-Control Studies DNA Genetic Predisposition to Disease Genetic Variation Genotype Haplotypes Humans Middle Aged Phenotype Receptors, Complement 3d Risk Assessment Transcription Factors Young Adult Systemic Antinuclear Single Nucleotide Antibodies Lupus Erythematosus Polymorphism |
dc.subject.keyword.eng.fl_str_mv |
Systemic Antinuclear Single Nucleotide Antibodies Lupus Erythematosus Polymorphism |
description |
Objectives Systemic lupus erythematosus (SLE; OMIM 152700) is characterised by the production of antibodies to nuclear antigens. We previously identified variants in complement receptor 2 (CR2/CD21) that were associated with decreased risk of SLE. This study aimed to identify the causal variant for this association. Methods Genotyped and imputed genetic variants spanning CR2 were assessed for association with SLE in 15 750 case-control subjects from four ancestral groups. Allele-specific functional effects of associated variants were determined using quantitative real-time PCR, quantitative flow cytometry, electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP)-PCR. Results The strongest association signal was detected at rs1876453 in intron 1 of CR2 (pmeta=4.2×10-4, OR 0.85), specifically when subjects were stratified based on the presence of dsDNA autoantibodies (case-control pmeta=7.6×10-7, OR 0.71; case-only pmeta=1.9×10-4, OR 0.75). Although allele-specific effects on B cell CR2 mRNA or protein levels were not identified, levels of complement receptor 1 (CR1/CD35) mRNA and protein were significantly higher on B cells of subjects harbouring the minor allele (p=0.0248 and p=0.0006, respectively). The minor allele altered the formation of several DNA protein complexes by EMSA, including one containing CCCTC-binding factor (CTCF), an effect that was confirmed by ChIP-PCR. Conclusions These data suggest that rs1876453 in CR2 has long-range effects on gene regulation that decrease susceptibility to lupus. Since the minor allele at rs1876453 is preferentially associated with reduced risk of the highly specific dsDNA autoantibodies that are present in preclinical, active and severe lupus, understanding its mechanisms will have important therapeutic implications. |
publishDate |
2016 |
dc.date.created.spa.fl_str_mv |
2016 |
dc.date.accessioned.none.fl_str_mv |
2020-05-25T23:56:30Z |
dc.date.available.none.fl_str_mv |
2020-05-25T23:56:30Z |
dc.type.eng.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.spa.spa.fl_str_mv |
Artículo |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1136/annrheumdis-2014-205584 |
dc.identifier.issn.none.fl_str_mv |
00034967 14682060 |
dc.identifier.uri.none.fl_str_mv |
https://repository.urosario.edu.co/handle/10336/22444 |
url |
https://doi.org/10.1136/annrheumdis-2014-205584 https://repository.urosario.edu.co/handle/10336/22444 |
identifier_str_mv |
00034967 14682060 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.citationEndPage.none.fl_str_mv |
252 |
dc.relation.citationIssue.none.fl_str_mv |
No. 1 |
dc.relation.citationStartPage.none.fl_str_mv |
242 |
dc.relation.citationTitle.none.fl_str_mv |
Annals of the Rheumatic Diseases |
dc.relation.citationVolume.none.fl_str_mv |
Vol. 75 |
dc.relation.ispartof.spa.fl_str_mv |
Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.75, No.1 (2016); pp. 242-252 |
dc.relation.uri.spa.fl_str_mv |
https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954322451&doi=10.1136%2fannrheumdis-2014-205584&partnerID=40&md5=e3852eae3ac6476dd9b1ee51101803f8 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.acceso.spa.fl_str_mv |
Abierto (Texto Completo) |
rights_invalid_str_mv |
Abierto (Texto Completo) http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
BMJ Publishing Group |
institution |
Universidad del Rosario |
dc.source.instname.spa.fl_str_mv |
instname:Universidad del Rosario |
dc.source.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional EdocUR |
repository.name.fl_str_mv |
Repositorio institucional EdocUR |
repository.mail.fl_str_mv |
edocur@urosario.edu.co |
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1814167632219209728 |
spelling |
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We previously identified variants in complement receptor 2 (CR2/CD21) that were associated with decreased risk of SLE. This study aimed to identify the causal variant for this association. Methods Genotyped and imputed genetic variants spanning CR2 were assessed for association with SLE in 15 750 case-control subjects from four ancestral groups. Allele-specific functional effects of associated variants were determined using quantitative real-time PCR, quantitative flow cytometry, electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP)-PCR. Results The strongest association signal was detected at rs1876453 in intron 1 of CR2 (pmeta=4.2×10-4, OR 0.85), specifically when subjects were stratified based on the presence of dsDNA autoantibodies (case-control pmeta=7.6×10-7, OR 0.71; case-only pmeta=1.9×10-4, OR 0.75). Although allele-specific effects on B cell CR2 mRNA or protein levels were not identified, levels of complement receptor 1 (CR1/CD35) mRNA and protein were significantly higher on B cells of subjects harbouring the minor allele (p=0.0248 and p=0.0006, respectively). The minor allele altered the formation of several DNA protein complexes by EMSA, including one containing CCCTC-binding factor (CTCF), an effect that was confirmed by ChIP-PCR. Conclusions These data suggest that rs1876453 in CR2 has long-range effects on gene regulation that decrease susceptibility to lupus. Since the minor allele at rs1876453 is preferentially associated with reduced risk of the highly specific dsDNA autoantibodies that are present in preclinical, active and severe lupus, understanding its mechanisms will have important therapeutic implications.application/pdfhttps://doi.org/10.1136/annrheumdis-2014-2055840003496714682060https://repository.urosario.edu.co/handle/10336/22444engBMJ Publishing Group252No. 1242Annals of the Rheumatic DiseasesVol. 75Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.75, No.1 (2016); pp. 242-252https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954322451&doi=10.1136%2fannrheumdis-2014-205584&partnerID=40&md5=e3852eae3ac6476dd9b1ee51101803f8Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURComplement component C3b receptorComplement receptorComplement receptor 2Double stranded DNA antibodyMessenger RNATranscription factor CTCFUnclassified drugAntinuclear antibodyComplement component C3b receptorComplement component C3d receptorCR1 protein, humanDNATranscription factorAlleleArticleB lymphocyteCase control studyChromatin immunoprecipitationControlled studyDNA protein complexFlow cytometryGel mobility shift assayGenetic associationGenetic variabilityGenotypeHumanIntronMajor clinical studyPathogenesisPriority journalReal time polymerase chain reactionSystemic lupus erythematosusAdolescentAdultBiosynthesisBloodGenetic predispositionGenetic variationGeneticsHaplotypeImmunologyMetabolismMiddle agedPhenotypeProceduresRisk assessmentSingle nucleotide polymorphismSystemic lupus erythematosusYoung adultAdolescentAdultB-Lymphocyte SubsetsCase-Control StudiesDNAGenetic Predisposition to DiseaseGenetic VariationGenotypeHaplotypesHumansMiddle AgedPhenotypeReceptors, Complement 3dRisk AssessmentTranscription FactorsYoung AdultSystemicAntinuclearSingle NucleotideAntibodiesLupus ErythematosusPolymorphismPreferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNAarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Zhao, JianGiles, Brendan MTaylor, Rhonda LYette, Gabriel ALough, Kara MNg, Han LengAbraham, Lawrence JWu, HuiKelly, Jennifer AGlenn, Stuart BAdler, Adam JWilliams, Adrienne HComeau, Mary EZiegler, Julie TMarion, MirandaAlarcón-Riquelme, Marta EAlarcón, Graciela SAnaya, Juan-ManuelBae, Sang-CheolKim, DamLee, Hye-SoonCriswell, Lindsey AFreedman, Barry IGilkeson, Gary SGuthridge, Joel MJacob, Chaim OJames, Judith AKamen, Diane LMerrill, Joan TSivils, Kathy MoserNiewold, Timothy BPetri, Michelle ARamsey-Goldman, RosalindReveille, John DScofield, R HalStevens, Anne MVilá, Luis MVyse, Timothy JKaufman, Kenneth MHarley, John BLangefeld, Carl DGaffney, Patrick MBrown, Elizabeth EEdberg, Jeffrey CKimberly, Robert PUlgiati, DanielaTsao, Betty PBoackle, Susan A10336/22444oai:repository.urosario.edu.co:10336/224442022-05-02 07:37:13.75043https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co |