Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA

Objectives Systemic lupus erythematosus (SLE; OMIM 152700) is characterised by the production of antibodies to nuclear antigens. We previously identified variants in complement receptor 2 (CR2/CD21) that were associated with decreased risk of SLE. This study aimed to identify the causal variant for...

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Autores:
Tipo de recurso:
Fecha de publicación:
2016
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/22444
Acceso en línea:
https://doi.org/10.1136/annrheumdis-2014-205584
https://repository.urosario.edu.co/handle/10336/22444
Palabra clave:
Complement component C3b receptor
Complement receptor
Complement receptor 2
Double stranded DNA antibody
Messenger RNA
Transcription factor CTCF
Unclassified drug
Antinuclear antibody
Complement component C3b receptor
Complement component C3d receptor
CR1 protein, human
DNA
Transcription factor
Allele
Article
B lymphocyte
Case control study
Chromatin immunoprecipitation
Controlled study
DNA protein complex
Flow cytometry
Gel mobility shift assay
Genetic association
Genetic variability
Genotype
Human
Intron
Major clinical study
Pathogenesis
Priority journal
Real time polymerase chain reaction
Systemic lupus erythematosus
Adolescent
Adult
Biosynthesis
Blood
Genetic predisposition
Genetic variation
Genetics
Haplotype
Immunology
Metabolism
Middle aged
Phenotype
Procedures
Risk assessment
Single nucleotide polymorphism
Systemic lupus erythematosus
Young adult
Adolescent
Adult
B-Lymphocyte Subsets
Case-Control Studies
DNA
Genetic Predisposition to Disease
Genetic Variation
Genotype
Haplotypes
Humans
Middle Aged
Phenotype
Receptors, Complement 3d
Risk Assessment
Transcription Factors
Young Adult
Systemic
Antinuclear
Single Nucleotide
Antibodies
Lupus Erythematosus
Polymorphism
Rights
License
Abierto (Texto Completo)
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oai_identifier_str oai:repository.urosario.edu.co:10336/22444
network_acronym_str EDOCUR2
network_name_str Repositorio EdocUR - U. Rosario
repository_id_str
dc.title.spa.fl_str_mv Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
title Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
spellingShingle Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
Complement component C3b receptor
Complement receptor
Complement receptor 2
Double stranded DNA antibody
Messenger RNA
Transcription factor CTCF
Unclassified drug
Antinuclear antibody
Complement component C3b receptor
Complement component C3d receptor
CR1 protein, human
DNA
Transcription factor
Allele
Article
B lymphocyte
Case control study
Chromatin immunoprecipitation
Controlled study
DNA protein complex
Flow cytometry
Gel mobility shift assay
Genetic association
Genetic variability
Genotype
Human
Intron
Major clinical study
Pathogenesis
Priority journal
Real time polymerase chain reaction
Systemic lupus erythematosus
Adolescent
Adult
Biosynthesis
Blood
Genetic predisposition
Genetic variation
Genetics
Haplotype
Immunology
Metabolism
Middle aged
Phenotype
Procedures
Risk assessment
Single nucleotide polymorphism
Systemic lupus erythematosus
Young adult
Adolescent
Adult
B-Lymphocyte Subsets
Case-Control Studies
DNA
Genetic Predisposition to Disease
Genetic Variation
Genotype
Haplotypes
Humans
Middle Aged
Phenotype
Receptors, Complement 3d
Risk Assessment
Transcription Factors
Young Adult
Systemic
Antinuclear
Single Nucleotide
Antibodies
Lupus Erythematosus
Polymorphism
title_short Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
title_full Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
title_fullStr Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
title_full_unstemmed Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
title_sort Preferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNA
dc.subject.keyword.spa.fl_str_mv Complement component C3b receptor
Complement receptor
Complement receptor 2
Double stranded DNA antibody
Messenger RNA
Transcription factor CTCF
Unclassified drug
Antinuclear antibody
Complement component C3b receptor
Complement component C3d receptor
CR1 protein, human
DNA
Transcription factor
Allele
Article
B lymphocyte
Case control study
Chromatin immunoprecipitation
Controlled study
DNA protein complex
Flow cytometry
Gel mobility shift assay
Genetic association
Genetic variability
Genotype
Human
Intron
Major clinical study
Pathogenesis
Priority journal
Real time polymerase chain reaction
Systemic lupus erythematosus
Adolescent
Adult
Biosynthesis
Blood
Genetic predisposition
Genetic variation
Genetics
Haplotype
Immunology
Metabolism
Middle aged
Phenotype
Procedures
Risk assessment
Single nucleotide polymorphism
Systemic lupus erythematosus
Young adult
Adolescent
Adult
B-Lymphocyte Subsets
Case-Control Studies
DNA
Genetic Predisposition to Disease
Genetic Variation
Genotype
Haplotypes
Humans
Middle Aged
Phenotype
Receptors, Complement 3d
Risk Assessment
Transcription Factors
Young Adult
topic Complement component C3b receptor
Complement receptor
Complement receptor 2
Double stranded DNA antibody
Messenger RNA
Transcription factor CTCF
Unclassified drug
Antinuclear antibody
Complement component C3b receptor
Complement component C3d receptor
CR1 protein, human
DNA
Transcription factor
Allele
Article
B lymphocyte
Case control study
Chromatin immunoprecipitation
Controlled study
DNA protein complex
Flow cytometry
Gel mobility shift assay
Genetic association
Genetic variability
Genotype
Human
Intron
Major clinical study
Pathogenesis
Priority journal
Real time polymerase chain reaction
Systemic lupus erythematosus
Adolescent
Adult
Biosynthesis
Blood
Genetic predisposition
Genetic variation
Genetics
Haplotype
Immunology
Metabolism
Middle aged
Phenotype
Procedures
Risk assessment
Single nucleotide polymorphism
Systemic lupus erythematosus
Young adult
Adolescent
Adult
B-Lymphocyte Subsets
Case-Control Studies
DNA
Genetic Predisposition to Disease
Genetic Variation
Genotype
Haplotypes
Humans
Middle Aged
Phenotype
Receptors, Complement 3d
Risk Assessment
Transcription Factors
Young Adult
Systemic
Antinuclear
Single Nucleotide
Antibodies
Lupus Erythematosus
Polymorphism
dc.subject.keyword.eng.fl_str_mv Systemic
Antinuclear
Single Nucleotide
Antibodies
Lupus Erythematosus
Polymorphism
description Objectives Systemic lupus erythematosus (SLE; OMIM 152700) is characterised by the production of antibodies to nuclear antigens. We previously identified variants in complement receptor 2 (CR2/CD21) that were associated with decreased risk of SLE. This study aimed to identify the causal variant for this association. Methods Genotyped and imputed genetic variants spanning CR2 were assessed for association with SLE in 15 750 case-control subjects from four ancestral groups. Allele-specific functional effects of associated variants were determined using quantitative real-time PCR, quantitative flow cytometry, electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP)-PCR. Results The strongest association signal was detected at rs1876453 in intron 1 of CR2 (pmeta=4.2×10-4, OR 0.85), specifically when subjects were stratified based on the presence of dsDNA autoantibodies (case-control pmeta=7.6×10-7, OR 0.71; case-only pmeta=1.9×10-4, OR 0.75). Although allele-specific effects on B cell CR2 mRNA or protein levels were not identified, levels of complement receptor 1 (CR1/CD35) mRNA and protein were significantly higher on B cells of subjects harbouring the minor allele (p=0.0248 and p=0.0006, respectively). The minor allele altered the formation of several DNA protein complexes by EMSA, including one containing CCCTC-binding factor (CTCF), an effect that was confirmed by ChIP-PCR. Conclusions These data suggest that rs1876453 in CR2 has long-range effects on gene regulation that decrease susceptibility to lupus. Since the minor allele at rs1876453 is preferentially associated with reduced risk of the highly specific dsDNA autoantibodies that are present in preclinical, active and severe lupus, understanding its mechanisms will have important therapeutic implications.
publishDate 2016
dc.date.created.spa.fl_str_mv 2016
dc.date.accessioned.none.fl_str_mv 2020-05-25T23:56:30Z
dc.date.available.none.fl_str_mv 2020-05-25T23:56:30Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1136/annrheumdis-2014-205584
dc.identifier.issn.none.fl_str_mv 00034967
14682060
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/22444
url https://doi.org/10.1136/annrheumdis-2014-205584
https://repository.urosario.edu.co/handle/10336/22444
identifier_str_mv 00034967
14682060
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 252
dc.relation.citationIssue.none.fl_str_mv No. 1
dc.relation.citationStartPage.none.fl_str_mv 242
dc.relation.citationTitle.none.fl_str_mv Annals of the Rheumatic Diseases
dc.relation.citationVolume.none.fl_str_mv Vol. 75
dc.relation.ispartof.spa.fl_str_mv Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.75, No.1 (2016); pp. 242-252
dc.relation.uri.spa.fl_str_mv https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954322451&doi=10.1136%2fannrheumdis-2014-205584&partnerID=40&md5=e3852eae3ac6476dd9b1ee51101803f8
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.acceso.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv BMJ Publishing Group
institution Universidad del Rosario
dc.source.instname.spa.fl_str_mv instname:Universidad del Rosario
dc.source.reponame.spa.fl_str_mv reponame:Repositorio Institucional EdocUR
repository.name.fl_str_mv Repositorio institucional EdocUR
repository.mail.fl_str_mv edocur@urosario.edu.co
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We previously identified variants in complement receptor 2 (CR2/CD21) that were associated with decreased risk of SLE. This study aimed to identify the causal variant for this association. Methods Genotyped and imputed genetic variants spanning CR2 were assessed for association with SLE in 15 750 case-control subjects from four ancestral groups. Allele-specific functional effects of associated variants were determined using quantitative real-time PCR, quantitative flow cytometry, electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitation (ChIP)-PCR. Results The strongest association signal was detected at rs1876453 in intron 1 of CR2 (pmeta=4.2×10-4, OR 0.85), specifically when subjects were stratified based on the presence of dsDNA autoantibodies (case-control pmeta=7.6×10-7, OR 0.71; case-only pmeta=1.9×10-4, OR 0.75). Although allele-specific effects on B cell CR2 mRNA or protein levels were not identified, levels of complement receptor 1 (CR1/CD35) mRNA and protein were significantly higher on B cells of subjects harbouring the minor allele (p=0.0248 and p=0.0006, respectively). The minor allele altered the formation of several DNA protein complexes by EMSA, including one containing CCCTC-binding factor (CTCF), an effect that was confirmed by ChIP-PCR. Conclusions These data suggest that rs1876453 in CR2 has long-range effects on gene regulation that decrease susceptibility to lupus. Since the minor allele at rs1876453 is preferentially associated with reduced risk of the highly specific dsDNA autoantibodies that are present in preclinical, active and severe lupus, understanding its mechanisms will have important therapeutic implications.application/pdfhttps://doi.org/10.1136/annrheumdis-2014-2055840003496714682060https://repository.urosario.edu.co/handle/10336/22444engBMJ Publishing Group252No. 1242Annals of the Rheumatic DiseasesVol. 75Annals of the Rheumatic Diseases, ISSN:00034967, 14682060, Vol.75, No.1 (2016); pp. 242-252https://www.scopus.com/inward/record.uri?eid=2-s2.0-84954322451&doi=10.1136%2fannrheumdis-2014-205584&partnerID=40&md5=e3852eae3ac6476dd9b1ee51101803f8Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURComplement component C3b receptorComplement receptorComplement receptor 2Double stranded DNA antibodyMessenger RNATranscription factor CTCFUnclassified drugAntinuclear antibodyComplement component C3b receptorComplement component C3d receptorCR1 protein, humanDNATranscription factorAlleleArticleB lymphocyteCase control studyChromatin immunoprecipitationControlled studyDNA protein complexFlow cytometryGel mobility shift assayGenetic associationGenetic variabilityGenotypeHumanIntronMajor clinical studyPathogenesisPriority journalReal time polymerase chain reactionSystemic lupus erythematosusAdolescentAdultBiosynthesisBloodGenetic predispositionGenetic variationGeneticsHaplotypeImmunologyMetabolismMiddle agedPhenotypeProceduresRisk assessmentSingle nucleotide polymorphismSystemic lupus erythematosusYoung adultAdolescentAdultB-Lymphocyte SubsetsCase-Control StudiesDNAGenetic Predisposition to DiseaseGenetic VariationGenotypeHaplotypesHumansMiddle AgedPhenotypeReceptors, Complement 3dRisk AssessmentTranscription FactorsYoung AdultSystemicAntinuclearSingle NucleotideAntibodiesLupus ErythematosusPolymorphismPreferential association of a functional variant in complement receptor 2 with antibodies to double-stranded DNAarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Zhao, JianGiles, Brendan MTaylor, Rhonda LYette, Gabriel ALough, Kara MNg, Han LengAbraham, Lawrence JWu, HuiKelly, Jennifer AGlenn, Stuart BAdler, Adam JWilliams, Adrienne HComeau, Mary EZiegler, Julie TMarion, MirandaAlarcón-Riquelme, Marta EAlarcón, Graciela SAnaya, Juan-ManuelBae, Sang-CheolKim, DamLee, Hye-SoonCriswell, Lindsey AFreedman, Barry IGilkeson, Gary SGuthridge, Joel MJacob, Chaim OJames, Judith AKamen, Diane LMerrill, Joan TSivils, Kathy MoserNiewold, Timothy BPetri, Michelle ARamsey-Goldman, RosalindReveille, John DScofield, R HalStevens, Anne MVilá, Luis MVyse, Timothy JKaufman, Kenneth MHarley, John BLangefeld, Carl DGaffney, Patrick MBrown, Elizabeth EEdberg, Jeffrey CKimberly, Robert PUlgiati, DanielaTsao, Betty PBoackle, Susan A10336/22444oai:repository.urosario.edu.co:10336/224442022-05-02 07:37:13.75043https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co