Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis

The PTPN22 gene codes for an intracellular lymphoid-specific phosphatase (Lyp) that has a negative regulatory effect on T-cell activation. Because Lyp is an important molecule involved in the inflammatory response, and its levels are increased in cells that participate in the immune response against...

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Tipo de recurso:
Fecha de publicación:
2005
Institución:
Universidad del Rosario
Repositorio:
Repositorio EdocUR - U. Rosario
Idioma:
eng
OAI Identifier:
oai:repository.urosario.edu.co:10336/24216
Acceso en línea:
https://doi.org/10.1016/j.humimm.2005.11.008
https://repository.urosario.edu.co/handle/10336/24216
Palabra clave:
Protein
Protein tyrosine phosphatase nonreceptor 22 protein
Unclassified drug
Protein tyrosine phosphatase
Protein tyrosine phosphatase lyp
Protein-tyrosine phosphatase lyp
Adult
Antigen recognition
Article
Autoimmunity
Confidence interval
Controlled study
Dna polymorphism
Female
Gene frequency
Genetic analysis
Genetic code
Genetic predisposition
Genetic risk
Heredity
Human
Immune system
Lung tuberculosis
Major clinical study
Male
Mycobacterium tuberculosis
Priority journal
Randomization
Risk factor
Tuberculin test
Case control study
Colombia
Genetics
Immunology
Lung tuberculosis
Middle aged
Single nucleotide polymorphism
Adult
Case-control studies
Colombia
Female
Genetic predisposition to disease
Humans
Male
Middle aged
Mycobacterium tuberculosis
Protein-tyrosine-phosphatase
Autoimmunity
Delayed-type hypersensitivity
Ptpn22
Tuberculin skin test
Tuberculosis
pulmonary
single nucleotide
Polymorphism
Tuberculosis
Rights
License
Abierto (Texto Completo)
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spelling 941360cf-121f-472f-a80b-323c2541b991194747786002f39b598-6c95-403a-886a-c41c0128c8182020-05-26T00:10:12Z2020-05-26T00:10:12Z2005The PTPN22 gene codes for an intracellular lymphoid-specific phosphatase (Lyp) that has a negative regulatory effect on T-cell activation. Because Lyp is an important molecule involved in the inflammatory response, and its levels are increased in cells that participate in the immune response against Mycobacterium tuberculosis, we hypothesized that the functional PTPN22 C1858T polymorphism could be a genetic factor predisposing to the development of tuberculosis (TB). Accordingly, we undertook an association study in which 113 patients with pulmonary TB and 161 matched healthy controls stratified by the tuberculin skin test (TST) were examined. Significant skewing was observed when T allele frequencies of patients with TB and all controls were compared (P = 0.04, odds ratio = 0.3; 95% confidence interval = 0.08-1.04) and frequencies of patients with TB and TST+ healthy controls were compared (P = 0.01, odds ratio = 0.2; 95% confidence interval = 0.05-0.79). No stratification was detected between patients and control samples. These results suggest that the T allele may be a factor protecting against development of TB once the immune system recognizes M. tuberculosis (i.e., TST+ individuals), whereas the C allele may be a risk factor for development of overt TB. The results also indicate that an association opposite that between the PTPN22 polymorphism and TB exists between TB and autoimmunity. © 2006 American Society for Histocompatibility and Immunogenetics.application/pdfhttps://doi.org/10.1016/j.humimm.2005.11.0081988859https://repository.urosario.edu.co/handle/10336/24216eng1247No. 121242Human ImmunologyVol. 66Human Immunology, ISSN:1988859, Vol.66, No.12 (2005); pp. 1242-1247https://www.scopus.com/inward/record.uri?eid=2-s2.0-33745652977&doi=10.1016%2fj.humimm.2005.11.008&partnerID=40&md5=3c89dd128d88c2ecea190ee90b22a109Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2instname:Universidad del Rosarioreponame:Repositorio Institucional EdocURProteinProtein tyrosine phosphatase nonreceptor 22 proteinUnclassified drugProtein tyrosine phosphataseProtein tyrosine phosphatase lypProtein-tyrosine phosphatase lypAdultAntigen recognitionArticleAutoimmunityConfidence intervalControlled studyDna polymorphismFemaleGene frequencyGenetic analysisGenetic codeGenetic predispositionGenetic riskHeredityHumanImmune systemLung tuberculosisMajor clinical studyMaleMycobacterium tuberculosisPriority journalRandomizationRisk factorTuberculin testCase control studyColombiaGeneticsImmunologyLung tuberculosisMiddle agedSingle nucleotide polymorphismAdultCase-control studiesColombiaFemaleGenetic predisposition to diseaseHumansMaleMiddle agedMycobacterium tuberculosisProtein-tyrosine-phosphataseAutoimmunityDelayed-type hypersensitivityPtpn22Tuberculin skin testTuberculosispulmonarysingle nucleotidePolymorphismTuberculosisGenetic Influence of PTPN22 R620W Polymorphism in TuberculosisarticleArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Gomez L.M.Anaya, Juan-ManuelMartin J.ORIGINALGenetic_Influence_of_PTPN22_R620W_Polymo.pdfapplication/pdf111251https://repository.urosario.edu.co/bitstreams/24c430fc-3b86-4ad3-8e12-c61c84f855a2/download65b3c89e5371122a01e2872bce0fe9e1MD51TEXTGenetic_Influence_of_PTPN22_R620W_Polymo.pdf.txtGenetic_Influence_of_PTPN22_R620W_Polymo.pdf.txtExtracted texttext/plain28206https://repository.urosario.edu.co/bitstreams/1a60a457-1f09-4c5d-89d3-05a2dce0426a/download08a9b622bb7352dd4539dfae583bbbc4MD52THUMBNAILGenetic_Influence_of_PTPN22_R620W_Polymo.pdf.jpgGenetic_Influence_of_PTPN22_R620W_Polymo.pdf.jpgGenerated Thumbnailimage/jpeg4398https://repository.urosario.edu.co/bitstreams/f2fbcc7f-c8e8-435d-a98d-efeadb42794c/downloadf860b2177e08891fde20e146c1cdf96fMD5310336/24216oai:repository.urosario.edu.co:10336/242162022-05-02 07:37:13.248009https://repository.urosario.edu.coRepositorio institucional EdocURedocur@urosario.edu.co
dc.title.spa.fl_str_mv Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
title Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
spellingShingle Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
Protein
Protein tyrosine phosphatase nonreceptor 22 protein
Unclassified drug
Protein tyrosine phosphatase
Protein tyrosine phosphatase lyp
Protein-tyrosine phosphatase lyp
Adult
Antigen recognition
Article
Autoimmunity
Confidence interval
Controlled study
Dna polymorphism
Female
Gene frequency
Genetic analysis
Genetic code
Genetic predisposition
Genetic risk
Heredity
Human
Immune system
Lung tuberculosis
Major clinical study
Male
Mycobacterium tuberculosis
Priority journal
Randomization
Risk factor
Tuberculin test
Case control study
Colombia
Genetics
Immunology
Lung tuberculosis
Middle aged
Single nucleotide polymorphism
Adult
Case-control studies
Colombia
Female
Genetic predisposition to disease
Humans
Male
Middle aged
Mycobacterium tuberculosis
Protein-tyrosine-phosphatase
Autoimmunity
Delayed-type hypersensitivity
Ptpn22
Tuberculin skin test
Tuberculosis
pulmonary
single nucleotide
Polymorphism
Tuberculosis
title_short Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
title_full Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
title_fullStr Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
title_full_unstemmed Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
title_sort Genetic Influence of PTPN22 R620W Polymorphism in Tuberculosis
dc.subject.keyword.spa.fl_str_mv Protein
Protein tyrosine phosphatase nonreceptor 22 protein
Unclassified drug
Protein tyrosine phosphatase
Protein tyrosine phosphatase lyp
Protein-tyrosine phosphatase lyp
Adult
Antigen recognition
Article
Autoimmunity
Confidence interval
Controlled study
Dna polymorphism
Female
Gene frequency
Genetic analysis
Genetic code
Genetic predisposition
Genetic risk
Heredity
Human
Immune system
Lung tuberculosis
Major clinical study
Male
Mycobacterium tuberculosis
Priority journal
Randomization
Risk factor
Tuberculin test
Case control study
Colombia
Genetics
Immunology
Lung tuberculosis
Middle aged
Single nucleotide polymorphism
Adult
Case-control studies
Colombia
Female
Genetic predisposition to disease
Humans
Male
Middle aged
Mycobacterium tuberculosis
Protein-tyrosine-phosphatase
Autoimmunity
Delayed-type hypersensitivity
Ptpn22
Tuberculin skin test
Tuberculosis
topic Protein
Protein tyrosine phosphatase nonreceptor 22 protein
Unclassified drug
Protein tyrosine phosphatase
Protein tyrosine phosphatase lyp
Protein-tyrosine phosphatase lyp
Adult
Antigen recognition
Article
Autoimmunity
Confidence interval
Controlled study
Dna polymorphism
Female
Gene frequency
Genetic analysis
Genetic code
Genetic predisposition
Genetic risk
Heredity
Human
Immune system
Lung tuberculosis
Major clinical study
Male
Mycobacterium tuberculosis
Priority journal
Randomization
Risk factor
Tuberculin test
Case control study
Colombia
Genetics
Immunology
Lung tuberculosis
Middle aged
Single nucleotide polymorphism
Adult
Case-control studies
Colombia
Female
Genetic predisposition to disease
Humans
Male
Middle aged
Mycobacterium tuberculosis
Protein-tyrosine-phosphatase
Autoimmunity
Delayed-type hypersensitivity
Ptpn22
Tuberculin skin test
Tuberculosis
pulmonary
single nucleotide
Polymorphism
Tuberculosis
dc.subject.keyword.eng.fl_str_mv pulmonary
single nucleotide
Polymorphism
Tuberculosis
description The PTPN22 gene codes for an intracellular lymphoid-specific phosphatase (Lyp) that has a negative regulatory effect on T-cell activation. Because Lyp is an important molecule involved in the inflammatory response, and its levels are increased in cells that participate in the immune response against Mycobacterium tuberculosis, we hypothesized that the functional PTPN22 C1858T polymorphism could be a genetic factor predisposing to the development of tuberculosis (TB). Accordingly, we undertook an association study in which 113 patients with pulmonary TB and 161 matched healthy controls stratified by the tuberculin skin test (TST) were examined. Significant skewing was observed when T allele frequencies of patients with TB and all controls were compared (P = 0.04, odds ratio = 0.3; 95% confidence interval = 0.08-1.04) and frequencies of patients with TB and TST+ healthy controls were compared (P = 0.01, odds ratio = 0.2; 95% confidence interval = 0.05-0.79). No stratification was detected between patients and control samples. These results suggest that the T allele may be a factor protecting against development of TB once the immune system recognizes M. tuberculosis (i.e., TST+ individuals), whereas the C allele may be a risk factor for development of overt TB. The results also indicate that an association opposite that between the PTPN22 polymorphism and TB exists between TB and autoimmunity. © 2006 American Society for Histocompatibility and Immunogenetics.
publishDate 2005
dc.date.created.spa.fl_str_mv 2005
dc.date.accessioned.none.fl_str_mv 2020-05-26T00:10:12Z
dc.date.available.none.fl_str_mv 2020-05-26T00:10:12Z
dc.type.eng.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.spa.spa.fl_str_mv Artículo
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.humimm.2005.11.008
dc.identifier.issn.none.fl_str_mv 1988859
dc.identifier.uri.none.fl_str_mv https://repository.urosario.edu.co/handle/10336/24216
url https://doi.org/10.1016/j.humimm.2005.11.008
https://repository.urosario.edu.co/handle/10336/24216
identifier_str_mv 1988859
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.citationEndPage.none.fl_str_mv 1247
dc.relation.citationIssue.none.fl_str_mv No. 12
dc.relation.citationStartPage.none.fl_str_mv 1242
dc.relation.citationTitle.none.fl_str_mv Human Immunology
dc.relation.citationVolume.none.fl_str_mv Vol. 66
dc.relation.ispartof.spa.fl_str_mv Human Immunology, ISSN:1988859, Vol.66, No.12 (2005); pp. 1242-1247
dc.relation.uri.spa.fl_str_mv https://www.scopus.com/inward/record.uri?eid=2-s2.0-33745652977&doi=10.1016%2fj.humimm.2005.11.008&partnerID=40&md5=3c89dd128d88c2ecea190ee90b22a109
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