High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
Renal involvement is one of the most severe manifestations of systemic lupus erythematosus (SLE). Renal biopsy is the gold standard when it comes to knowing whether a patient has lupus nephritis, and the degree of renal disease present. However, the biopsy has various complications, bleeding being t...
- Autores:
-
Navarro-Quiroz E.
Pacheco-Lugo L.
Lorenzi H.
Díaz-Olmos Y.
Almendrales L.
Rico E.
Navarro Quiroz, Roberto Carlos
España-Puccini P.
Iglesias A.
Egea E.
Aroca G.
- Tipo de recurso:
- Article of journal
- Fecha de publicación:
- 2016
- Institución:
- Universidad Cooperativa de Colombia
- Repositorio:
- Repositorio UCC
- Idioma:
- OAI Identifier:
- oai:repository.ucc.edu.co:20.500.12494/41905
- Acceso en línea:
- https://doi.org/10.17533/udea.rfnsp.v35n1a10
https://hdl.handle.net/20.500.12494/41905
- Palabra clave:
- microRNA
microRNA 221 5p
microRNA 3074 3p
microRNA 380 3p
microRNA 556 5p
microRNA 758 3p
unclassified drug
biological marker
microRNA
MIRN221 microRNA
human
MIRN3074 microRNA
human
MIRN380 microRNA
human
MIRN556 microRNA
human
MIRN758 microRNA
human
area under the curve
Article
blood sampling
case control study
cross-sectional study
diagnostic accuracy
diagnostic test accuracy study
disease association
disease marker
gene expression
high throughput screening
human
human cell
kidney injury
observational study
polymerase chain reaction
predictive value
receiver operating characteristic
sensitivity and specificity
systemic lupus erythematosus
validity
adult
blood
female
gene expression profiling
genetics
high throughput sequencing
lupus erythematosus nephritis
male
middle aged
principal component analysis
procedures
reverse transcription polymerase chain reaction
systemic lupus erythematosus
young adult
Adult
Biomarkers
Female
Gene
- Rights
- closedAccess
- License
- http://purl.org/coar/access_right/c_14cb
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dc.title.spa.fl_str_mv |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
title |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
spellingShingle |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus microRNA microRNA 221 5p microRNA 3074 3p microRNA 380 3p microRNA 556 5p microRNA 758 3p unclassified drug biological marker microRNA MIRN221 microRNA human MIRN3074 microRNA human MIRN380 microRNA human MIRN556 microRNA human MIRN758 microRNA human area under the curve Article blood sampling case control study cross-sectional study diagnostic accuracy diagnostic test accuracy study disease association disease marker gene expression high throughput screening human human cell kidney injury observational study polymerase chain reaction predictive value receiver operating characteristic sensitivity and specificity systemic lupus erythematosus validity adult blood female gene expression profiling genetics high throughput sequencing lupus erythematosus nephritis male middle aged principal component analysis procedures reverse transcription polymerase chain reaction systemic lupus erythematosus young adult Adult Biomarkers Female Gene |
title_short |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
title_full |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
title_fullStr |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
title_full_unstemmed |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
title_sort |
High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus |
dc.creator.fl_str_mv |
Navarro-Quiroz E. Pacheco-Lugo L. Lorenzi H. Díaz-Olmos Y. Almendrales L. Rico E. Navarro Quiroz, Roberto Carlos España-Puccini P. Iglesias A. Egea E. Aroca G. |
dc.contributor.author.none.fl_str_mv |
Navarro-Quiroz E. Pacheco-Lugo L. Lorenzi H. Díaz-Olmos Y. Almendrales L. Rico E. Navarro Quiroz, Roberto Carlos España-Puccini P. Iglesias A. Egea E. Aroca G. |
dc.subject.spa.fl_str_mv |
microRNA microRNA 221 5p microRNA 3074 3p microRNA 380 3p microRNA 556 5p microRNA 758 3p unclassified drug biological marker microRNA MIRN221 microRNA human MIRN3074 microRNA human MIRN380 microRNA human MIRN556 microRNA human MIRN758 microRNA human area under the curve Article blood sampling case control study cross-sectional study diagnostic accuracy diagnostic test accuracy study disease association disease marker gene expression high throughput screening human human cell kidney injury observational study polymerase chain reaction predictive value receiver operating characteristic sensitivity and specificity systemic lupus erythematosus validity adult blood female gene expression profiling genetics high throughput sequencing lupus erythematosus nephritis male middle aged principal component analysis procedures reverse transcription polymerase chain reaction systemic lupus erythematosus young adult Adult Biomarkers Female Gene |
topic |
microRNA microRNA 221 5p microRNA 3074 3p microRNA 380 3p microRNA 556 5p microRNA 758 3p unclassified drug biological marker microRNA MIRN221 microRNA human MIRN3074 microRNA human MIRN380 microRNA human MIRN556 microRNA human MIRN758 microRNA human area under the curve Article blood sampling case control study cross-sectional study diagnostic accuracy diagnostic test accuracy study disease association disease marker gene expression high throughput screening human human cell kidney injury observational study polymerase chain reaction predictive value receiver operating characteristic sensitivity and specificity systemic lupus erythematosus validity adult blood female gene expression profiling genetics high throughput sequencing lupus erythematosus nephritis male middle aged principal component analysis procedures reverse transcription polymerase chain reaction systemic lupus erythematosus young adult Adult Biomarkers Female Gene |
description |
Renal involvement is one of the most severe manifestations of systemic lupus erythematosus (SLE). Renal biopsy is the gold standard when it comes to knowing whether a patient has lupus nephritis, and the degree of renal disease present. However, the biopsy has various complications, bleeding being the most common. Therefore, the development of alternative, non-invasive diagnostic tests for kidney disease in patients with SLE is a priority. Micro RNAs (miRNAs) are differentially expressed in various tissues, and changes in their expression have been associated with several pathological processes. The aim of this study was to identify changes in the abundance of miRNAs in plasma samples from patients with lupus nephritis that could potentially allow the diagnosis of renal damage in SLE patients. This is an observational case-control cross-sectional study, in which we characterized the differential abundance profiles of miRNAs among patients with different degrees of lupus compared with SLE patients without renal involvement and healthy control individuals. We found 89 miRNAs with changes in their abundance between lupus nephritis patients and healthy controls, and 17 miRNAs that showed significant variations between SLE patients with or without renal involvement. Validation for qPCR of a group of miRNAs on additional samples from lupus patients with or without nephritis, and from healthy individuals, showed that five miRNAs presented an average detection sensitivity of 97%, a specificity of 70.3%, a positive predictive value of 82.5%, a negative predictive value of 96% and a diagnosis efficiency of 87.9%. These results strongly suggest that miR-221-5p, miR-380-3p, miR-556-5p, miR-758-3p and miR-3074-3p are potential diagnostic biomarkers of lupus nephritis in patients with SLE. The observed differential pattern of miRNA abundance may have functional implications in the pathophysiology of SLE renal damage. © 2016 Navarro-Quiroz et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
publishDate |
2016 |
dc.date.issued.none.fl_str_mv |
2016 |
dc.date.accessioned.none.fl_str_mv |
2021-12-16T22:15:53Z |
dc.date.available.none.fl_str_mv |
2021-12-16T22:15:53Z |
dc.type.none.fl_str_mv |
Artículo |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.coar.none.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.coarversion.none.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.driver.none.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.redcol.none.fl_str_mv |
http://purl.org/redcol/resource_type/ART |
dc.type.version.none.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
http://purl.org/coar/resource_type/c_6501 |
status_str |
publishedVersion |
dc.identifier.none.fl_str_mv |
https://doi.org/10.17533/udea.rfnsp.v35n1a10 |
dc.identifier.issn.spa.fl_str_mv |
19326203 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12494/41905 |
dc.identifier.bibliographicCitation.spa.fl_str_mv |
Navarro E,Pacheco L,Lorenzi H,Díaz Y,Almendrales L,Rico E,Navarro R,España P,Iglesias A,Egea E,Aroca G. High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus. PLoS One. 2016. 11. (11):e0166202. . |
url |
https://doi.org/10.17533/udea.rfnsp.v35n1a10 https://hdl.handle.net/20.500.12494/41905 |
identifier_str_mv |
19326203 Navarro E,Pacheco L,Lorenzi H,Díaz Y,Almendrales L,Rico E,Navarro R,España P,Iglesias A,Egea E,Aroca G. High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus. PLoS One. 2016. 11. (11):e0166202. . |
dc.relation.ispartofjournal.spa.fl_str_mv |
Plos One |
dc.rights.accessrights.none.fl_str_mv |
info:eu-repo/semantics/closedAccess |
dc.rights.coar.none.fl_str_mv |
http://purl.org/coar/access_right/c_14cb |
eu_rights_str_mv |
closedAccess |
rights_invalid_str_mv |
http://purl.org/coar/access_right/c_14cb |
dc.format.extent.spa.fl_str_mv |
- |
dc.publisher.spa.fl_str_mv |
Public Library of Science |
institution |
Universidad Cooperativa de Colombia |
repository.name.fl_str_mv |
Repositorio Institucional Universidad Cooperativa de Colombia |
repository.mail.fl_str_mv |
bdigital@metabiblioteca.com |
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1814246588579577856 |
spelling |
Navarro-Quiroz E.Pacheco-Lugo L.Lorenzi H.Díaz-Olmos Y.Almendrales L.Rico E.Navarro Quiroz, Roberto CarlosEspaña-Puccini P.Iglesias A.Egea E.Aroca G.2021-12-16T22:15:53Z2021-12-16T22:15:53Z2016https://doi.org/10.17533/udea.rfnsp.v35n1a1019326203https://hdl.handle.net/20.500.12494/41905Navarro E,Pacheco L,Lorenzi H,Díaz Y,Almendrales L,Rico E,Navarro R,España P,Iglesias A,Egea E,Aroca G. High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus. PLoS One. 2016. 11. (11):e0166202. .Renal involvement is one of the most severe manifestations of systemic lupus erythematosus (SLE). Renal biopsy is the gold standard when it comes to knowing whether a patient has lupus nephritis, and the degree of renal disease present. However, the biopsy has various complications, bleeding being the most common. Therefore, the development of alternative, non-invasive diagnostic tests for kidney disease in patients with SLE is a priority. Micro RNAs (miRNAs) are differentially expressed in various tissues, and changes in their expression have been associated with several pathological processes. The aim of this study was to identify changes in the abundance of miRNAs in plasma samples from patients with lupus nephritis that could potentially allow the diagnosis of renal damage in SLE patients. This is an observational case-control cross-sectional study, in which we characterized the differential abundance profiles of miRNAs among patients with different degrees of lupus compared with SLE patients without renal involvement and healthy control individuals. We found 89 miRNAs with changes in their abundance between lupus nephritis patients and healthy controls, and 17 miRNAs that showed significant variations between SLE patients with or without renal involvement. Validation for qPCR of a group of miRNAs on additional samples from lupus patients with or without nephritis, and from healthy individuals, showed that five miRNAs presented an average detection sensitivity of 97%, a specificity of 70.3%, a positive predictive value of 82.5%, a negative predictive value of 96% and a diagnosis efficiency of 87.9%. These results strongly suggest that miR-221-5p, miR-380-3p, miR-556-5p, miR-758-3p and miR-3074-3p are potential diagnostic biomarkers of lupus nephritis in patients with SLE. The observed differential pattern of miRNA abundance may have functional implications in the pathophysiology of SLE renal damage. © 2016 Navarro-Quiroz et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.roberto.navarroq@ucc.edu.co-Public Library of SciencemicroRNAmicroRNA 221 5pmicroRNA 3074 3pmicroRNA 380 3pmicroRNA 556 5pmicroRNA 758 3punclassified drugbiological markermicroRNAMIRN221 microRNAhumanMIRN3074 microRNAhumanMIRN380 microRNAhumanMIRN556 microRNAhumanMIRN758 microRNAhumanarea under the curveArticleblood samplingcase control studycross-sectional studydiagnostic accuracydiagnostic test accuracy studydisease associationdisease markergene expressionhigh throughput screeninghumanhuman cellkidney injuryobservational studypolymerase chain reactionpredictive valuereceiver operating characteristicsensitivity and specificitysystemic lupus erythematosusvalidityadultbloodfemalegene expression profilinggeneticshigh throughput sequencinglupus erythematosus nephritismalemiddle agedprincipal component analysisproceduresreverse transcription polymerase chain reactionsystemic lupus erythematosusyoung adultAdultBiomarkersFemaleGeneHigh-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosusArtículohttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articlehttp://purl.org/redcol/resource_type/ARTinfo:eu-repo/semantics/publishedVersionPlos Oneinfo:eu-repo/semantics/closedAccesshttp://purl.org/coar/access_right/c_14cbPublication20.500.12494/41905oai:repository.ucc.edu.co:20.500.12494/419052024-08-20 16:15:59.598metadata.onlyhttps://repository.ucc.edu.coRepositorio Institucional Universidad Cooperativa de Colombiabdigital@metabiblioteca.com |