High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus

Renal involvement is one of the most severe manifestations of systemic lupus erythematosus (SLE). Renal biopsy is the gold standard when it comes to knowing whether a patient has lupus nephritis, and the degree of renal disease present. However, the biopsy has various complications, bleeding being t...

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Autores:
Navarro-Quiroz E.
Pacheco-Lugo L.
Lorenzi H.
Díaz-Olmos Y.
Almendrales L.
Rico E.
Navarro Quiroz, Roberto Carlos
España-Puccini P.
Iglesias A.
Egea E.
Aroca G.
Tipo de recurso:
Article of journal
Fecha de publicación:
2016
Institución:
Universidad Cooperativa de Colombia
Repositorio:
Repositorio UCC
Idioma:
OAI Identifier:
oai:repository.ucc.edu.co:20.500.12494/41905
Acceso en línea:
https://doi.org/10.17533/udea.rfnsp.v35n1a10
https://hdl.handle.net/20.500.12494/41905
Palabra clave:
microRNA
microRNA 221 5p
microRNA 3074 3p
microRNA 380 3p
microRNA 556 5p
microRNA 758 3p
unclassified drug
biological marker
microRNA
MIRN221 microRNA
human
MIRN3074 microRNA
human
MIRN380 microRNA
human
MIRN556 microRNA
human
MIRN758 microRNA
human
area under the curve
Article
blood sampling
case control study
cross-sectional study
diagnostic accuracy
diagnostic test accuracy study
disease association
disease marker
gene expression
high throughput screening
human
human cell
kidney injury
observational study
polymerase chain reaction
predictive value
receiver operating characteristic
sensitivity and specificity
systemic lupus erythematosus
validity
adult
blood
female
gene expression profiling
genetics
high throughput sequencing
lupus erythematosus nephritis
male
middle aged
principal component analysis
procedures
reverse transcription polymerase chain reaction
systemic lupus erythematosus
young adult
Adult
Biomarkers
Female
Gene
Rights
closedAccess
License
http://purl.org/coar/access_right/c_14cb
id COOPER2_096497dd27f28559cf5f787049133888
oai_identifier_str oai:repository.ucc.edu.co:20.500.12494/41905
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dc.title.spa.fl_str_mv High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
title High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
spellingShingle High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
microRNA
microRNA 221 5p
microRNA 3074 3p
microRNA 380 3p
microRNA 556 5p
microRNA 758 3p
unclassified drug
biological marker
microRNA
MIRN221 microRNA
human
MIRN3074 microRNA
human
MIRN380 microRNA
human
MIRN556 microRNA
human
MIRN758 microRNA
human
area under the curve
Article
blood sampling
case control study
cross-sectional study
diagnostic accuracy
diagnostic test accuracy study
disease association
disease marker
gene expression
high throughput screening
human
human cell
kidney injury
observational study
polymerase chain reaction
predictive value
receiver operating characteristic
sensitivity and specificity
systemic lupus erythematosus
validity
adult
blood
female
gene expression profiling
genetics
high throughput sequencing
lupus erythematosus nephritis
male
middle aged
principal component analysis
procedures
reverse transcription polymerase chain reaction
systemic lupus erythematosus
young adult
Adult
Biomarkers
Female
Gene
title_short High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
title_full High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
title_fullStr High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
title_full_unstemmed High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
title_sort High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus
dc.creator.fl_str_mv Navarro-Quiroz E.
Pacheco-Lugo L.
Lorenzi H.
Díaz-Olmos Y.
Almendrales L.
Rico E.
Navarro Quiroz, Roberto Carlos
España-Puccini P.
Iglesias A.
Egea E.
Aroca G.
dc.contributor.author.none.fl_str_mv Navarro-Quiroz E.
Pacheco-Lugo L.
Lorenzi H.
Díaz-Olmos Y.
Almendrales L.
Rico E.
Navarro Quiroz, Roberto Carlos
España-Puccini P.
Iglesias A.
Egea E.
Aroca G.
dc.subject.spa.fl_str_mv microRNA
microRNA 221 5p
microRNA 3074 3p
microRNA 380 3p
microRNA 556 5p
microRNA 758 3p
unclassified drug
biological marker
microRNA
MIRN221 microRNA
human
MIRN3074 microRNA
human
MIRN380 microRNA
human
MIRN556 microRNA
human
MIRN758 microRNA
human
area under the curve
Article
blood sampling
case control study
cross-sectional study
diagnostic accuracy
diagnostic test accuracy study
disease association
disease marker
gene expression
high throughput screening
human
human cell
kidney injury
observational study
polymerase chain reaction
predictive value
receiver operating characteristic
sensitivity and specificity
systemic lupus erythematosus
validity
adult
blood
female
gene expression profiling
genetics
high throughput sequencing
lupus erythematosus nephritis
male
middle aged
principal component analysis
procedures
reverse transcription polymerase chain reaction
systemic lupus erythematosus
young adult
Adult
Biomarkers
Female
Gene
topic microRNA
microRNA 221 5p
microRNA 3074 3p
microRNA 380 3p
microRNA 556 5p
microRNA 758 3p
unclassified drug
biological marker
microRNA
MIRN221 microRNA
human
MIRN3074 microRNA
human
MIRN380 microRNA
human
MIRN556 microRNA
human
MIRN758 microRNA
human
area under the curve
Article
blood sampling
case control study
cross-sectional study
diagnostic accuracy
diagnostic test accuracy study
disease association
disease marker
gene expression
high throughput screening
human
human cell
kidney injury
observational study
polymerase chain reaction
predictive value
receiver operating characteristic
sensitivity and specificity
systemic lupus erythematosus
validity
adult
blood
female
gene expression profiling
genetics
high throughput sequencing
lupus erythematosus nephritis
male
middle aged
principal component analysis
procedures
reverse transcription polymerase chain reaction
systemic lupus erythematosus
young adult
Adult
Biomarkers
Female
Gene
description Renal involvement is one of the most severe manifestations of systemic lupus erythematosus (SLE). Renal biopsy is the gold standard when it comes to knowing whether a patient has lupus nephritis, and the degree of renal disease present. However, the biopsy has various complications, bleeding being the most common. Therefore, the development of alternative, non-invasive diagnostic tests for kidney disease in patients with SLE is a priority. Micro RNAs (miRNAs) are differentially expressed in various tissues, and changes in their expression have been associated with several pathological processes. The aim of this study was to identify changes in the abundance of miRNAs in plasma samples from patients with lupus nephritis that could potentially allow the diagnosis of renal damage in SLE patients. This is an observational case-control cross-sectional study, in which we characterized the differential abundance profiles of miRNAs among patients with different degrees of lupus compared with SLE patients without renal involvement and healthy control individuals. We found 89 miRNAs with changes in their abundance between lupus nephritis patients and healthy controls, and 17 miRNAs that showed significant variations between SLE patients with or without renal involvement. Validation for qPCR of a group of miRNAs on additional samples from lupus patients with or without nephritis, and from healthy individuals, showed that five miRNAs presented an average detection sensitivity of 97%, a specificity of 70.3%, a positive predictive value of 82.5%, a negative predictive value of 96% and a diagnosis efficiency of 87.9%. These results strongly suggest that miR-221-5p, miR-380-3p, miR-556-5p, miR-758-3p and miR-3074-3p are potential diagnostic biomarkers of lupus nephritis in patients with SLE. The observed differential pattern of miRNA abundance may have functional implications in the pathophysiology of SLE renal damage. © 2016 Navarro-Quiroz et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
publishDate 2016
dc.date.issued.none.fl_str_mv 2016
dc.date.accessioned.none.fl_str_mv 2021-12-16T22:15:53Z
dc.date.available.none.fl_str_mv 2021-12-16T22:15:53Z
dc.type.none.fl_str_mv Artículo
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dc.type.driver.none.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.none.fl_str_mv https://doi.org/10.17533/udea.rfnsp.v35n1a10
dc.identifier.issn.spa.fl_str_mv 19326203
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12494/41905
dc.identifier.bibliographicCitation.spa.fl_str_mv Navarro E,Pacheco L,Lorenzi H,Díaz Y,Almendrales L,Rico E,Navarro R,España P,Iglesias A,Egea E,Aroca G. High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus. PLoS One. 2016. 11. (11):e0166202. .
url https://doi.org/10.17533/udea.rfnsp.v35n1a10
https://hdl.handle.net/20.500.12494/41905
identifier_str_mv 19326203
Navarro E,Pacheco L,Lorenzi H,Díaz Y,Almendrales L,Rico E,Navarro R,España P,Iglesias A,Egea E,Aroca G. High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus. PLoS One. 2016. 11. (11):e0166202. .
dc.relation.ispartofjournal.spa.fl_str_mv Plos One
dc.rights.accessrights.none.fl_str_mv info:eu-repo/semantics/closedAccess
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dc.format.extent.spa.fl_str_mv -
dc.publisher.spa.fl_str_mv Public Library of Science
institution Universidad Cooperativa de Colombia
repository.name.fl_str_mv Repositorio Institucional Universidad Cooperativa de Colombia
repository.mail.fl_str_mv bdigital@metabiblioteca.com
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spelling Navarro-Quiroz E.Pacheco-Lugo L.Lorenzi H.Díaz-Olmos Y.Almendrales L.Rico E.Navarro Quiroz, Roberto CarlosEspaña-Puccini P.Iglesias A.Egea E.Aroca G.2021-12-16T22:15:53Z2021-12-16T22:15:53Z2016https://doi.org/10.17533/udea.rfnsp.v35n1a1019326203https://hdl.handle.net/20.500.12494/41905Navarro E,Pacheco L,Lorenzi H,Díaz Y,Almendrales L,Rico E,Navarro R,España P,Iglesias A,Egea E,Aroca G. High-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosus. PLoS One. 2016. 11. (11):e0166202. .Renal involvement is one of the most severe manifestations of systemic lupus erythematosus (SLE). Renal biopsy is the gold standard when it comes to knowing whether a patient has lupus nephritis, and the degree of renal disease present. However, the biopsy has various complications, bleeding being the most common. Therefore, the development of alternative, non-invasive diagnostic tests for kidney disease in patients with SLE is a priority. Micro RNAs (miRNAs) are differentially expressed in various tissues, and changes in their expression have been associated with several pathological processes. The aim of this study was to identify changes in the abundance of miRNAs in plasma samples from patients with lupus nephritis that could potentially allow the diagnosis of renal damage in SLE patients. This is an observational case-control cross-sectional study, in which we characterized the differential abundance profiles of miRNAs among patients with different degrees of lupus compared with SLE patients without renal involvement and healthy control individuals. We found 89 miRNAs with changes in their abundance between lupus nephritis patients and healthy controls, and 17 miRNAs that showed significant variations between SLE patients with or without renal involvement. Validation for qPCR of a group of miRNAs on additional samples from lupus patients with or without nephritis, and from healthy individuals, showed that five miRNAs presented an average detection sensitivity of 97%, a specificity of 70.3%, a positive predictive value of 82.5%, a negative predictive value of 96% and a diagnosis efficiency of 87.9%. These results strongly suggest that miR-221-5p, miR-380-3p, miR-556-5p, miR-758-3p and miR-3074-3p are potential diagnostic biomarkers of lupus nephritis in patients with SLE. The observed differential pattern of miRNA abundance may have functional implications in the pathophysiology of SLE renal damage. © 2016 Navarro-Quiroz et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.roberto.navarroq@ucc.edu.co-Public Library of SciencemicroRNAmicroRNA 221 5pmicroRNA 3074 3pmicroRNA 380 3pmicroRNA 556 5pmicroRNA 758 3punclassified drugbiological markermicroRNAMIRN221 microRNAhumanMIRN3074 microRNAhumanMIRN380 microRNAhumanMIRN556 microRNAhumanMIRN758 microRNAhumanarea under the curveArticleblood samplingcase control studycross-sectional studydiagnostic accuracydiagnostic test accuracy studydisease associationdisease markergene expressionhigh throughput screeninghumanhuman cellkidney injuryobservational studypolymerase chain reactionpredictive valuereceiver operating characteristicsensitivity and specificitysystemic lupus erythematosusvalidityadultbloodfemalegene expression profilinggeneticshigh throughput sequencinglupus erythematosus nephritismalemiddle agedprincipal component analysisproceduresreverse transcription polymerase chain reactionsystemic lupus erythematosusyoung adultAdultBiomarkersFemaleGeneHigh-throughput sequencing reveals circulating miRNAs as potential biomarkers of kidney damage in patients with systemic lupus erythematosusArtículohttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articlehttp://purl.org/redcol/resource_type/ARTinfo:eu-repo/semantics/publishedVersionPlos Oneinfo:eu-repo/semantics/closedAccesshttp://purl.org/coar/access_right/c_14cbPublication20.500.12494/41905oai:repository.ucc.edu.co:20.500.12494/419052024-08-20 16:15:59.598metadata.onlyhttps://repository.ucc.edu.coRepositorio Institucional Universidad Cooperativa de Colombiabdigital@metabiblioteca.com