The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA
Oncidium ornithorhynchum, an epiphytic orchid characterized by erect, pyramidal inflorescences and small yellow flowers, is found in the northern Andes. However, according to the protologue, the type was collected in Mexico during Humboldt and Bonpland's American expedition (1800–1804). To clar...
- Autores:
- Tipo de recurso:
- Fecha de publicación:
- 2019
- Institución:
- Universidad Tecnológica de Bolívar
- Repositorio:
- Repositorio Institucional UTB
- Idioma:
- eng
- OAI Identifier:
- oai:repositorio.utb.edu.co:20.500.12585/9139
- Acceso en línea:
- https://hdl.handle.net/20.500.12585/9139
- Palabra clave:
- Herbarium DNA amplification
Molecular phylogenetics
Oncidium ornithorhynchum
Oncidium sotoanum
South America
Amplification
DNA
Epiphyte
Herb
Herbarium
Molecular ecology
Phylogenetics
Andes
Canada
Humboldt
Mexico [North America]
Saskatchewan
Oncidium
Oncidium ornithorhynchum
Orchidaceae
- Rights
- restrictedAccess
- License
- http://creativecommons.org/licenses/by-nc-nd/4.0/
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The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| title |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| spellingShingle |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA Herbarium DNA amplification Molecular phylogenetics Oncidium ornithorhynchum Oncidium sotoanum South America Amplification DNA Epiphyte Herb Herbarium Molecular ecology Phylogenetics Andes Canada Humboldt Mexico [North America] Saskatchewan Oncidium Oncidium ornithorhynchum Orchidaceae |
| title_short |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| title_full |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| title_fullStr |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| title_full_unstemmed |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| title_sort |
The origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNA |
| dc.subject.keywords.none.fl_str_mv |
Herbarium DNA amplification Molecular phylogenetics Oncidium ornithorhynchum Oncidium sotoanum South America Amplification DNA Epiphyte Herb Herbarium Molecular ecology Phylogenetics Andes Canada Humboldt Mexico [North America] Saskatchewan Oncidium Oncidium ornithorhynchum Orchidaceae |
| topic |
Herbarium DNA amplification Molecular phylogenetics Oncidium ornithorhynchum Oncidium sotoanum South America Amplification DNA Epiphyte Herb Herbarium Molecular ecology Phylogenetics Andes Canada Humboldt Mexico [North America] Saskatchewan Oncidium Oncidium ornithorhynchum Orchidaceae |
| description |
Oncidium ornithorhynchum, an epiphytic orchid characterized by erect, pyramidal inflorescences and small yellow flowers, is found in the northern Andes. However, according to the protologue, the type was collected in Mexico during Humboldt and Bonpland's American expedition (1800–1804). To clarify this problem, we extracted DNA from the ancient holotype. Short-range PCRs for plastid (matK-trnK, trnH-psbA, ycf1) and nuclear (nrITS) markers were established and used to infer its phylogenetic placement with several related Central American and Andean orchid species. This provided well-supported and close relationships of the holotype with other North Andean orchids, proving that the locus classicus was confounded. Also O. sotoanum from Mexico, with which O. ornithorhynchum has often been confused, was only distantly related. © 2019 International Association for Plant Taxonomy |
| publishDate |
2019 |
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2019 |
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2020-03-26T16:33:02Z |
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2020-03-26T16:33:02Z |
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http://purl.org/coar/version/c_970fb48d4fbd8a85 |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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info:eu-repo/semantics/article |
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Artículo |
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Taxon; Vol. 68, Núm. 3; pp. 471-480 |
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00400262 |
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https://hdl.handle.net/20.500.12585/9139 |
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10.1002/tax.12067 |
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Universidad Tecnológica de Bolívar |
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Repositorio UTB |
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57191284375 57210643915 56027344300 6504309639 23985665400 57202242831 |
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Taxon; Vol. 68, Núm. 3; pp. 471-480 00400262 10.1002/tax.12067 Universidad Tecnológica de Bolívar Repositorio UTB 57191284375 57210643915 56027344300 6504309639 23985665400 57202242831 |
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https://hdl.handle.net/20.500.12585/9139 |
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eng |
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eng |
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http://purl.org/coar/access_right/c_16ec |
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application/pdf |
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John Wiley and Sons Inc. |
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2020-03-26T16:33:02Z2020-03-26T16:33:02Z2019Taxon; Vol. 68, Núm. 3; pp. 471-48000400262https://hdl.handle.net/20.500.12585/913910.1002/tax.12067Universidad Tecnológica de BolívarRepositorio UTB57191284375572106439155602734430065043096392398566540057202242831Oncidium ornithorhynchum, an epiphytic orchid characterized by erect, pyramidal inflorescences and small yellow flowers, is found in the northern Andes. However, according to the protologue, the type was collected in Mexico during Humboldt and Bonpland's American expedition (1800–1804). To clarify this problem, we extracted DNA from the ancient holotype. Short-range PCRs for plastid (matK-trnK, trnH-psbA, ycf1) and nuclear (nrITS) markers were established and used to infer its phylogenetic placement with several related Central American and Andean orchid species. This provided well-supported and close relationships of the holotype with other North Andean orchids, proving that the locus classicus was confounded. Also O. sotoanum from Mexico, with which O. ornithorhynchum has often been confused, was only distantly related. © 2019 International Association for Plant TaxonomyRecurso electrónicoapplication/pdfengJohn Wiley and Sons Inc.http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/restrictedAccessAtribución-NoComercial 4.0 Internacionalhttp://purl.org/coar/access_right/c_16echttps://www.scopus.com/inward/record.uri?eid=2-s2.0-85071155632&doi=10.1002%2ftax.12067&partnerID=40&md5=b12d511039183cb8d7bfc38f6d814d7bThe origin of Humboldt and Bonpland's holotype of Oncidium ornithorhynchum, clarified using +200-year-old DNAinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_2df8fbb1Herbarium DNA amplificationMolecular phylogeneticsOncidium ornithorhynchumOncidium sotoanumSouth AmericaAmplificationDNAEpiphyteHerbHerbariumMolecular ecologyPhylogeneticsAndesCanadaHumboldtMexico [North America]SaskatchewanOncidiumOncidium ornithorhynchumOrchidaceaeContreras-Ortiz N.Rodríguez-García T.Quintanilla S.Bernal-Villegas J.Madriñán S.Gómez-Gutiérrez A.Ames, M., Spooner, D.M., DNA from herbarium specimens settles a controversy about origins of the European potato (2008) Amer. J. Bot., 95, pp. 252-257. , https://doi.org/10.3732/ajb.95.2.252, &Andreasen, K., Manktelow, M., Razafimandimbison, S.G., Successful DNA amplification of a more than 200-year-old herbarium specimen: Recovering genetic material from the Linnaean era (2009) Taxon, 58, pp. 959-962. , https://doi.org/10.1002/tax.583023, &Ballesteros Pintor, D.P., (2017) Estrategia de reproducción sexual de Oncidium ornithorhynchum Kunth (Orchidaceae: Cymbidieae) en un fragmento de bosque en el municipio de La Calera, Cundinamarca, , http://bdigital.unal.edu.co/56946/7/dionnepaolaballesterospintor.2017.pdf, M.Sc. 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Genet., 101, pp. 724-732. , https://doi.org/10.1007/s001220051537, &http://purl.org/coar/resource_type/c_6501THUMBNAILMiniProdInv.pngMiniProdInv.pngimage/png23941https://repositorio.utb.edu.co/bitstream/20.500.12585/9139/1/MiniProdInv.png0cb0f101a8d16897fb46fc914d3d7043MD5120.500.12585/9139oai:repositorio.utb.edu.co:20.500.12585/91392021-02-02 14:54:22.133Repositorio Institucional UTBrepositorioutb@utb.edu.co |