Retinal image analysis: Image processing and feature extraction oriented to the clinical task

Medical digital imaging has become a key element of modern health care procedures. It provides visual documentation and a permanent record for the patients, and most important the ability to extract quantitative information about many diseases. Modern ophthalmology relies on the advances in digital...

Full description

Autores:
Tipo de recurso:
Fecha de publicación:
2017
Institución:
Universidad Tecnológica de Bolívar
Repositorio:
Repositorio Institucional UTB
Idioma:
eng
OAI Identifier:
oai:repositorio.utb.edu.co:20.500.12585/8744
Acceso en línea:
https://hdl.handle.net/20.500.12585/8744
Palabra clave:
Computer-aided diagnosis
Medical image
Ophthalmology
Retinal image
Telemedicine
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/4.0/
id UTB2_2427b5b2e532e461c72e6c58b77759ff
oai_identifier_str oai:repositorio.utb.edu.co:20.500.12585/8744
network_acronym_str UTB2
network_name_str Repositorio Institucional UTB
repository_id_str
dc.title.none.fl_str_mv Retinal image analysis: Image processing and feature extraction oriented to the clinical task
title Retinal image analysis: Image processing and feature extraction oriented to the clinical task
spellingShingle Retinal image analysis: Image processing and feature extraction oriented to the clinical task
Computer-aided diagnosis
Medical image
Ophthalmology
Retinal image
Telemedicine
title_short Retinal image analysis: Image processing and feature extraction oriented to the clinical task
title_full Retinal image analysis: Image processing and feature extraction oriented to the clinical task
title_fullStr Retinal image analysis: Image processing and feature extraction oriented to the clinical task
title_full_unstemmed Retinal image analysis: Image processing and feature extraction oriented to the clinical task
title_sort Retinal image analysis: Image processing and feature extraction oriented to the clinical task
dc.subject.keywords.none.fl_str_mv Computer-aided diagnosis
Medical image
Ophthalmology
Retinal image
Telemedicine
topic Computer-aided diagnosis
Medical image
Ophthalmology
Retinal image
Telemedicine
description Medical digital imaging has become a key element of modern health care procedures. It provides visual documentation and a permanent record for the patients, and most important the ability to extract quantitative information about many diseases. Modern ophthalmology relies on the advances in digital imaging and computing power. In this paper we present an overview of the results from the doctoral dissertation by Andrés G. Marrugo. This dissertation contributes to the digital analysis of retinal images and the problems that arise along the imaging pipeline of fundus photography, a field that is commonly referred to as retinal image analysis. We have dealt with and proposed solutions to problems that arise in retinal image acquisition and longitudinal monitoring of retinal disease evolution. Specifically, non-uniform illumination compensation, poor image quality, automated focusing, image segmentation, change detection, space-invariant (SI) and space-variant (SV) blind deconvolution (BD). Digital retinal image analysis can be effective and cost-efficient for disease management, computeraided diagnosis, screening and telemedicine and applicable to a variety of disorders such as glaucoma, macular degeneration, and retinopathy. © 2017. Sociedad Española de Óptica. All right reserved.
publishDate 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2019-11-06T19:05:16Z
dc.date.available.none.fl_str_mv 2019-11-06T19:05:16Z
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.driver.none.fl_str_mv info:eu-repo/semantics/article
dc.type.hasversion.none.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.spa.none.fl_str_mv Artículo
status_str publishedVersion
dc.identifier.citation.none.fl_str_mv Optica Pura y Aplicada; Vol. 50, Núm. 1; pp. 49-62
dc.identifier.issn.none.fl_str_mv 0030-3917
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12585/8744
dc.identifier.doi.none.fl_str_mv 10.7149/OPA.50.1.49507
dc.identifier.instname.none.fl_str_mv Universidad Tecnológica de Bolívar
dc.identifier.reponame.none.fl_str_mv Repositorio UTB
identifier_str_mv Optica Pura y Aplicada; Vol. 50, Núm. 1; pp. 49-62
0030-3917
10.7149/OPA.50.1.49507
Universidad Tecnológica de Bolívar
Repositorio UTB
url https://hdl.handle.net/20.500.12585/8744
dc.language.iso.none.fl_str_mv eng
language eng
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.none.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights.accessrights.none.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.cc.none.fl_str_mv Atribución-NoComercial 4.0 Internacional
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
Atribución-NoComercial 4.0 Internacional
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.medium.none.fl_str_mv Recurso electrónico
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Sociedad Espanola de Optica
publisher.none.fl_str_mv Sociedad Espanola de Optica
dc.source.none.fl_str_mv https://www2.scopus.com/inward/record.uri?eid=2-s2.0-85016604839&doi=10.7149%2fOPA.50.1.49507&partnerID=40&md5=82d7d7f5daa0a83d73d473185646a2a0
Scopus 24329839300
Scopus 7201466399
institution Universidad Tecnológica de Bolívar
bitstream.url.fl_str_mv https://repositorio.utb.edu.co/bitstream/20.500.12585/8744/1/DOI10_7149OPA_50_1_49507.pdf
https://repositorio.utb.edu.co/bitstream/20.500.12585/8744/4/DOI10_7149OPA_50_1_49507.pdf.txt
https://repositorio.utb.edu.co/bitstream/20.500.12585/8744/5/DOI10_7149OPA_50_1_49507.pdf.jpg
bitstream.checksum.fl_str_mv 6defd4c9d5385b24670ba2842d1144de
c631025ea2566d39c2352dbae3085978
6f48d37b1cbe4271bdb6ee2efeb073be
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional UTB
repository.mail.fl_str_mv repositorioutb@utb.edu.co
_version_ 1814021746718670848
spelling 2019-11-06T19:05:16Z2019-11-06T19:05:16Z2017Optica Pura y Aplicada; Vol. 50, Núm. 1; pp. 49-620030-3917https://hdl.handle.net/20.500.12585/874410.7149/OPA.50.1.49507Universidad Tecnológica de BolívarRepositorio UTBMedical digital imaging has become a key element of modern health care procedures. It provides visual documentation and a permanent record for the patients, and most important the ability to extract quantitative information about many diseases. Modern ophthalmology relies on the advances in digital imaging and computing power. In this paper we present an overview of the results from the doctoral dissertation by Andrés G. Marrugo. This dissertation contributes to the digital analysis of retinal images and the problems that arise along the imaging pipeline of fundus photography, a field that is commonly referred to as retinal image analysis. We have dealt with and proposed solutions to problems that arise in retinal image acquisition and longitudinal monitoring of retinal disease evolution. Specifically, non-uniform illumination compensation, poor image quality, automated focusing, image segmentation, change detection, space-invariant (SI) and space-variant (SV) blind deconvolution (BD). Digital retinal image analysis can be effective and cost-efficient for disease management, computeraided diagnosis, screening and telemedicine and applicable to a variety of disorders such as glaucoma, macular degeneration, and retinopathy. © 2017. Sociedad Española de Óptica. All right reserved.Recurso electrónicoapplication/pdfengSociedad Espanola de Opticahttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessAtribución-NoComercial 4.0 Internacionalhttp://purl.org/coar/access_right/c_abf2https://www2.scopus.com/inward/record.uri?eid=2-s2.0-85016604839&doi=10.7149%2fOPA.50.1.49507&partnerID=40&md5=82d7d7f5daa0a83d73d473185646a2a0Scopus 24329839300Scopus 7201466399Retinal image analysis: Image processing and feature extraction oriented to the clinical taskinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_2df8fbb1Computer-aided diagnosisMedical imageOphthalmologyRetinal imageTelemedicineMarrugo Hernández, Andrés GuillermoMillán, M.S.Abramoff, M.D., Garvin, M., Sonka, M., Retinal Imaging and Image Analysis (2010) Biomedical Engineering, IEEE Reviews, 3, pp. 169-208Marrugo, A.G., (2013) Comprehensive Retinal Image Analysis: Image Processing and Feature Extraction Techniques Oriented to the Clinical Task, , http://hdl.handle.net/10803/134698, Universitat Politècnica de Catalunya, BarcelonaMarrugo, A.G., Millan, M.S., Cristóbal, G., Gabarda, S., Abril, H.C., (2011) No-reference Quality Metrics for Eye Fundus Imaging, pp. 486-493. , CAIP, LNCS, 68542011Gabarda, S., Cristóbal, G., Blind image quality assessment through anisotropy (2007) J Opt Soc Am A Opt Image Sci Vis, 24, pp. B42-B51Zhu, X., Milanfar, P., Automatic Parameter Selection for Denoising Algorithms Using a No-Reference Measure of Image Content (2010) IEEE Trans Image Process, 19, pp. 3116-3132Ferzli, R., Karam, L.J., A no-reference objective image sharpness metric based on the notion of just noticeable blur (JNB) (2009) IEEE Trans Image Process, 18, pp. 717-728Qu, Y., Pu, Z., Zhao, H., Zhao, Y., Comparison of different quality assessment functions in autoregulative illumination intensity algorithms (2006) Opt. Eng, 45, p. 117201Marrugo, A.G., Millan, M.S., Cristóbal, G., Gabarda, S., Abril, H.C., Anisotropy-based robust focus measure for non-mydriatic retinal imaging (2012) J. Biomed. Opt, 17, p. 076021Moscaritolo, M., Jampel, H., Knezevich, F., Zeimer, R., An Image Based Auto-Focusing Algorithm for Digital Fundus Photography (2009) IEEE Trans. Med. Imaging, 28, pp. 1703-1707Nayar, S., Nakagawa, Y., Shape from focus (1994) IEEE Trans Pattern Anal Mach Intell, 16, pp. 824-831Choi, K., Lee, J., Ko, S., New autofocusing technique using the frequency selective weighted median filter for video cameras (1999) IEEE T. Consum. Electr, 45, pp. 820-827Kristan, M., Pers, J., Perse, M., Kovacic, S., A Bayes-spectral-entropy-based measure of camera focus using a discrete cosine transform (2006) Pattern Recognit. Lett, 27, pp. 1431-1439Marrugo, A.G., Millan, M.S., Abril, H.C., Implementation of an image based focusing algorithm for non-mydriatic retinal imaging (2014) Engineering Mechatronics and Automation (CIIMA), 2014 III International Congress of, pp. 1-3Marrugo, A.G., (2016) Anisotropy focus measure, , https://github.com/agmarrugo/anisotropy-focus/, [Online Accessed: 17-Apr]Narasimha-Iyer, H., Can, A., Roysam, B., Stewart, C., Tanenbaum, H., Majerovics, A., Singh, H., Robust detection and classification of longitudinal changes in color retinal fundus images for monitoring diabetic retinopathy (2005) IEEE Trans. Biomed. Eng, 53, pp. 1084-1098Marrugo, A.G., Sroubek, F., Sorel, M., Millan, M.S., (2011) Multichannel blind deconvolution in eye fundus imaging, presented at the ISABEL '11-Proceedings of the 4th International Symposium on Applied Sciences in Biomedical and Communication Technologies, 7, pp. 1-5Everdell, N., Styles, I., Calcagni, A., Gibson, J., Hebden, J., Claridge, E., Multispectral imaging of the ocular fundus using light emitting diode illumination (2010) Rev. Sci. Instrum, 81, pp. 093706-093709Marrugo, A.G., Sorel, M., Sroubek, F., Millan, M.S., Retinal image restoration by means of blind deconvolution (2011) J. Biomed. Opt, 16 (11), p. 116016Stewart, C., Tsai, C.-L., Roysam, B., The dual-bootstrap iterative closest point algorithm with application to retinal image registration (2003) IEEE Trans. Med. Imaging, 22, pp. 1379-1394Aach, T., Kaup, A., Bayesian Algorithms for Change Detection in Image Sequences Using Markov Random Fields (1995) Signal Process. Image, 7, pp. 147-160Levin, A., Weiss, Y., Durand, F., Freeman, W., Understanding Blind Deconvolution Algorithms (2011) IEEE Trans Pattern Anal. Mach Intell, 12, pp. 2354-2367Marrugo, A.G., Millan, M.S., Cristóbal, G., Gabarda, S., Sorel, M., Sroubek, F., (2012) Image analysis in modern ophthalmology: From acquisition to computer assisted diagnosis and telemedicine, presented at the Proceedings SPIE, 8436, pp. 84360C-84360CMuramatsu, C., Hayashi, Y., Sawada, A., Hatanaka, Y., Hara, T., Yamamoto, T., Fujita, H., Detection of retinal nerve fiber layer defects on retinal fundus images for early diagnosis of glaucoma (2010) J. Biomed. Opt, 15, p. 016021Xu, L., Luo, S., Optimal algorithm for automatic detection of microaneurysms based on receiver operating characteristic curve (2010) J. Biomed. Opt, 15, p. 065004Bedggood, P., Daaboul, M., Ashman, R., Smith, G., Metha, A., Characteristics of the human isoplanatic patch and implications for adaptive optics retinal imaging (2008) J. Biomed. Opt, 13, p. 24008Marrugo, A.G., Millan, M.S., Sorel, M., Sroubek, F., Restoration of retinal images with space-variant blur (2014) J. Biomed. Opt, 19 (1), p. 16023. , JanMarrugo, A.G., Millan, M.S., Sorel, M., Kotera, J., Sroubek, F., Improving the blind restoration of retinal images by means of point-spread-function estimation assessment (2015) presented at the Tenth International Symposium on Medical Information Processing and Analysis, 9287, p. 92871DTallón, M., Mateos, J., Babacan, S.D., Molina, R., Katsaggelos, A.K., Space-variant blur deconvolution and denoising in the dual exposure problem (2012) INFORMATION FUSIONMarrugo, A.G., Millan, M.S., Sorel, M., Sroubek, F., Blind restoration of retinal images degraded by space-variant blur with adaptive blur estimation (2013) presented at the 8th Ibero American Optics Meeting/11th Latin American Meeting on Optics, p. 8785D1. , Lasers, and Applications 8785http://purl.org/coar/resource_type/c_6501ORIGINALDOI10_7149OPA_50_1_49507.pdfapplication/pdf23780713https://repositorio.utb.edu.co/bitstream/20.500.12585/8744/1/DOI10_7149OPA_50_1_49507.pdf6defd4c9d5385b24670ba2842d1144deMD51TEXTDOI10_7149OPA_50_1_49507.pdf.txtDOI10_7149OPA_50_1_49507.pdf.txtExtracted texttext/plain57979https://repositorio.utb.edu.co/bitstream/20.500.12585/8744/4/DOI10_7149OPA_50_1_49507.pdf.txtc631025ea2566d39c2352dbae3085978MD54THUMBNAILDOI10_7149OPA_50_1_49507.pdf.jpgDOI10_7149OPA_50_1_49507.pdf.jpgGenerated Thumbnailimage/jpeg92652https://repositorio.utb.edu.co/bitstream/20.500.12585/8744/5/DOI10_7149OPA_50_1_49507.pdf.jpg6f48d37b1cbe4271bdb6ee2efeb073beMD5520.500.12585/8744oai:repositorio.utb.edu.co:20.500.12585/87442023-05-26 16:25:14.499Repositorio Institucional UTBrepositorioutb@utb.edu.co