Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
Dear Editor, The novel COVID-19 coronavirus (SARS-CoV-2) endangers thousands of lives. Recently, nearly 10% COVID-19 patients with symptoms of the digestive tract were subsequently diagnosed in newly discovered SARS-CoV-2 infected cases,1 which indicates that SARS-CoV-2 may infect people via digesti...
- Autores:
- Tipo de recurso:
- Article of journal
- Fecha de publicación:
- 2020
- Institución:
- Universidad de Bogotá Jorge Tadeo Lozano
- Repositorio:
- Expeditio: repositorio UTadeo
- Idioma:
- spa
- OAI Identifier:
- oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/12689
- Acceso en línea:
- https://www.nature.com/articles/s41392-020-00237-0
http://hdl.handle.net/20.500.12010/12689
https://doi.org/10.1038/s41392-020-00237-0
- Palabra clave:
- Single cell transcriptome
colon tissues
coronavirus infection
cytokine production
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
- Rights
- License
- Acceso restringido
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|
dc.title.spa.fl_str_mv |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
title |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
spellingShingle |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production Single cell transcriptome colon tissues coronavirus infection cytokine production Síndrome respiratorio agudo grave COVID-19 SARS-CoV-2 Coronavirus |
title_short |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
title_full |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
title_fullStr |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
title_full_unstemmed |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
title_sort |
Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production |
dc.subject.spa.fl_str_mv |
Single cell transcriptome colon tissues coronavirus infection cytokine production |
topic |
Single cell transcriptome colon tissues coronavirus infection cytokine production Síndrome respiratorio agudo grave COVID-19 SARS-CoV-2 Coronavirus |
dc.subject.lemb.spa.fl_str_mv |
Síndrome respiratorio agudo grave COVID-19 SARS-CoV-2 Coronavirus |
description |
Dear Editor, The novel COVID-19 coronavirus (SARS-CoV-2) endangers thousands of lives. Recently, nearly 10% COVID-19 patients with symptoms of the digestive tract were subsequently diagnosed in newly discovered SARS-CoV-2 infected cases,1 which indicates that SARS-CoV-2 may infect people via digestive systems. The expression profile of angiotensin-converting enzyme homolog 2 (ACE2) has been analyzed in gastrointestinal tract using external datasets. Unfortunately, most data of these datasets are not from Asian adults and the expression of other SARS-CoV-2 entry genes have not been detected in human gastrointestinal tract. Therefore, to provide more implications of viral transmission in clinical diagnosis and treatment, it is urgent to explore the expression of SARS-CoV-2 entry genes in the gastrointestinal tract of Asian people. Here, we used single-cell RNA sequencing profiled ~27,800 cells of intestinal tissues from six patients with basic intestinal disease of Renji hospital. |
publishDate |
2020 |
dc.date.accessioned.none.fl_str_mv |
2020-09-04T13:16:01Z |
dc.date.available.none.fl_str_mv |
2020-09-04T13:16:01Z |
dc.date.created.none.fl_str_mv |
2020-07-08 |
dc.type.local.spa.fl_str_mv |
Artículo |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
format |
http://purl.org/coar/resource_type/c_6501 |
dc.identifier.issn.spa.fl_str_mv |
2059-3635 |
dc.identifier.other.spa.fl_str_mv |
https://www.nature.com/articles/s41392-020-00237-0 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/20.500.12010/12689 |
dc.identifier.doi.spa.fl_str_mv |
https://doi.org/10.1038/s41392-020-00237-0 |
identifier_str_mv |
2059-3635 |
url |
https://www.nature.com/articles/s41392-020-00237-0 http://hdl.handle.net/20.500.12010/12689 https://doi.org/10.1038/s41392-020-00237-0 |
dc.language.iso.spa.fl_str_mv |
spa |
language |
spa |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_16ec |
dc.rights.local.spa.fl_str_mv |
Acceso restringido |
rights_invalid_str_mv |
Acceso restringido http://purl.org/coar/access_right/c_16ec |
dc.format.extent.spa.fl_str_mv |
3 páginas |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
signal transduction and targeted therapy |
dc.source.spa.fl_str_mv |
reponame:Expeditio Repositorio Institucional UJTL instname:Universidad de Bogotá Jorge Tadeo Lozano |
instname_str |
Universidad de Bogotá Jorge Tadeo Lozano |
institution |
Universidad de Bogotá Jorge Tadeo Lozano |
reponame_str |
Expeditio Repositorio Institucional UJTL |
collection |
Expeditio Repositorio Institucional UJTL |
bitstream.url.fl_str_mv |
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2020-09-04T13:16:01Z2020-09-04T13:16:01Z2020-07-082059-3635https://www.nature.com/articles/s41392-020-00237-0http://hdl.handle.net/20.500.12010/12689https://doi.org/10.1038/s41392-020-00237-03 páginasapplication/pdfspasignal transduction and targeted therapyreponame:Expeditio Repositorio Institucional UJTLinstname:Universidad de Bogotá Jorge Tadeo LozanoSingle cell transcriptomecolon tissuescoronavirus infectioncytokine productionSíndrome respiratorio agudo graveCOVID-19SARS-CoV-2CoronavirusSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine productionArtículohttp://purl.org/coar/resource_type/c_6501Acceso restringidohttp://purl.org/coar/access_right/c_16ecDear Editor, The novel COVID-19 coronavirus (SARS-CoV-2) endangers thousands of lives. Recently, nearly 10% COVID-19 patients with symptoms of the digestive tract were subsequently diagnosed in newly discovered SARS-CoV-2 infected cases,1 which indicates that SARS-CoV-2 may infect people via digestive systems. The expression profile of angiotensin-converting enzyme homolog 2 (ACE2) has been analyzed in gastrointestinal tract using external datasets. Unfortunately, most data of these datasets are not from Asian adults and the expression of other SARS-CoV-2 entry genes have not been detected in human gastrointestinal tract. Therefore, to provide more implications of viral transmission in clinical diagnosis and treatment, it is urgent to explore the expression of SARS-CoV-2 entry genes in the gastrointestinal tract of Asian people. Here, we used single-cell RNA sequencing profiled ~27,800 cells of intestinal tissues from six patients with basic intestinal disease of Renji hospital.Chen, HaoyanZou, Tian-HuiXuan, BaoqinYan, YuqingYan, TingtingShen, ChaoqinZhao, GangChen, Ying-XuanXiao, XiaoHong, JieFang, Jing-YuanLICENSElicense.txtlicense.txttext/plain; charset=utf-82938https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/2/license.txtabceeb1c943c50d3343516f9dbfc110fMD52open accessTHUMBNAILSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pngSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pngimage/png121036https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/4/Single%20cell%20transcriptome%20revealed%20SARS-CoV-2%20entry%20genes%20enriched%20in%20colon%20tissues%20and%20associated%20with%20coronavirus%20infection%20and%20cytokine%20production.png762925d21cbdf650ef2163bded20446fMD54open accessSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdf.jpgSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdf.jpgIM Thumbnailimage/jpeg25975https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/5/Single%20cell%20transcriptome%20revealed%20SARS-CoV-2%20entry%20genes%20enriched%20in%20colon%20tissues%20and%20associated%20with%20coronavirus%20infection%20and%20cytokine%20production.pdf.jpg1ef8a79475aa6a8477a28461801cbf93MD55open accessORIGINALSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdfSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdfDocumento Reservadoapplication/pdf1604968https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/3/Single%20cell%20transcriptome%20revealed%20SARS-CoV-2%20entry%20genes%20enriched%20in%20colon%20tissues%20and%20associated%20with%20coronavirus%20infection%20and%20cytokine%20production.pdf4f6ad1caa67d9d4393b4c57d22d12975MD53embargoed access|||2420-09-0420.500.12010/12689oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/126892020-09-04 08:18:35.121embargoed access|||2420-09-04Repositorio Institucional - Universidad Jorge Tadeo Lozanoexpeditio@utadeo.edu.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 |