Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production

Dear Editor, The novel COVID-19 coronavirus (SARS-CoV-2) endangers thousands of lives. Recently, nearly 10% COVID-19 patients with symptoms of the digestive tract were subsequently diagnosed in newly discovered SARS-CoV-2 infected cases,1 which indicates that SARS-CoV-2 may infect people via digesti...

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Autores:
Tipo de recurso:
Article of journal
Fecha de publicación:
2020
Institución:
Universidad de Bogotá Jorge Tadeo Lozano
Repositorio:
Expeditio: repositorio UTadeo
Idioma:
spa
OAI Identifier:
oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/12689
Acceso en línea:
https://www.nature.com/articles/s41392-020-00237-0
http://hdl.handle.net/20.500.12010/12689
https://doi.org/10.1038/s41392-020-00237-0
Palabra clave:
Single cell transcriptome
colon tissues
coronavirus infection
cytokine production
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
Rights
License
Acceso restringido
id UTADEO2_c9bbd673aafdd7454ff39a74b12860c0
oai_identifier_str oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/12689
network_acronym_str UTADEO2
network_name_str Expeditio: repositorio UTadeo
repository_id_str
dc.title.spa.fl_str_mv Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
title Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
spellingShingle Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
Single cell transcriptome
colon tissues
coronavirus infection
cytokine production
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
title_short Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
title_full Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
title_fullStr Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
title_full_unstemmed Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
title_sort Single cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production
dc.subject.spa.fl_str_mv Single cell transcriptome
colon tissues
coronavirus infection
cytokine production
topic Single cell transcriptome
colon tissues
coronavirus infection
cytokine production
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
dc.subject.lemb.spa.fl_str_mv Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
description Dear Editor, The novel COVID-19 coronavirus (SARS-CoV-2) endangers thousands of lives. Recently, nearly 10% COVID-19 patients with symptoms of the digestive tract were subsequently diagnosed in newly discovered SARS-CoV-2 infected cases,1 which indicates that SARS-CoV-2 may infect people via digestive systems. The expression profile of angiotensin-converting enzyme homolog 2 (ACE2) has been analyzed in gastrointestinal tract using external datasets. Unfortunately, most data of these datasets are not from Asian adults and the expression of other SARS-CoV-2 entry genes have not been detected in human gastrointestinal tract. Therefore, to provide more implications of viral transmission in clinical diagnosis and treatment, it is urgent to explore the expression of SARS-CoV-2 entry genes in the gastrointestinal tract of Asian people. Here, we used single-cell RNA sequencing profiled ~27,800 cells of intestinal tissues from six patients with basic intestinal disease of Renji hospital.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2020-09-04T13:16:01Z
dc.date.available.none.fl_str_mv 2020-09-04T13:16:01Z
dc.date.created.none.fl_str_mv 2020-07-08
dc.type.local.spa.fl_str_mv Artículo
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_6501
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dc.identifier.issn.spa.fl_str_mv 2059-3635
dc.identifier.other.spa.fl_str_mv https://www.nature.com/articles/s41392-020-00237-0
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12010/12689
dc.identifier.doi.spa.fl_str_mv https://doi.org/10.1038/s41392-020-00237-0
identifier_str_mv 2059-3635
url https://www.nature.com/articles/s41392-020-00237-0
http://hdl.handle.net/20.500.12010/12689
https://doi.org/10.1038/s41392-020-00237-0
dc.language.iso.spa.fl_str_mv spa
language spa
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_16ec
dc.rights.local.spa.fl_str_mv Acceso restringido
rights_invalid_str_mv Acceso restringido
http://purl.org/coar/access_right/c_16ec
dc.format.extent.spa.fl_str_mv 3 páginas
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv signal transduction and targeted therapy
dc.source.spa.fl_str_mv reponame:Expeditio Repositorio Institucional UJTL
instname:Universidad de Bogotá Jorge Tadeo Lozano
instname_str Universidad de Bogotá Jorge Tadeo Lozano
institution Universidad de Bogotá Jorge Tadeo Lozano
reponame_str Expeditio Repositorio Institucional UJTL
collection Expeditio Repositorio Institucional UJTL
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spelling 2020-09-04T13:16:01Z2020-09-04T13:16:01Z2020-07-082059-3635https://www.nature.com/articles/s41392-020-00237-0http://hdl.handle.net/20.500.12010/12689https://doi.org/10.1038/s41392-020-00237-03 páginasapplication/pdfspasignal transduction and targeted therapyreponame:Expeditio Repositorio Institucional UJTLinstname:Universidad de Bogotá Jorge Tadeo LozanoSingle cell transcriptomecolon tissuescoronavirus infectioncytokine productionSíndrome respiratorio agudo graveCOVID-19SARS-CoV-2CoronavirusSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine productionArtículohttp://purl.org/coar/resource_type/c_6501Acceso restringidohttp://purl.org/coar/access_right/c_16ecDear Editor, The novel COVID-19 coronavirus (SARS-CoV-2) endangers thousands of lives. Recently, nearly 10% COVID-19 patients with symptoms of the digestive tract were subsequently diagnosed in newly discovered SARS-CoV-2 infected cases,1 which indicates that SARS-CoV-2 may infect people via digestive systems. The expression profile of angiotensin-converting enzyme homolog 2 (ACE2) has been analyzed in gastrointestinal tract using external datasets. Unfortunately, most data of these datasets are not from Asian adults and the expression of other SARS-CoV-2 entry genes have not been detected in human gastrointestinal tract. Therefore, to provide more implications of viral transmission in clinical diagnosis and treatment, it is urgent to explore the expression of SARS-CoV-2 entry genes in the gastrointestinal tract of Asian people. Here, we used single-cell RNA sequencing profiled ~27,800 cells of intestinal tissues from six patients with basic intestinal disease of Renji hospital.Chen, HaoyanZou, Tian-HuiXuan, BaoqinYan, YuqingYan, TingtingShen, ChaoqinZhao, GangChen, Ying-XuanXiao, XiaoHong, JieFang, Jing-YuanLICENSElicense.txtlicense.txttext/plain; charset=utf-82938https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/2/license.txtabceeb1c943c50d3343516f9dbfc110fMD52open accessTHUMBNAILSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pngSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pngimage/png121036https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/4/Single%20cell%20transcriptome%20revealed%20SARS-CoV-2%20entry%20genes%20enriched%20in%20colon%20tissues%20and%20associated%20with%20coronavirus%20infection%20and%20cytokine%20production.png762925d21cbdf650ef2163bded20446fMD54open accessSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdf.jpgSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdf.jpgIM Thumbnailimage/jpeg25975https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/5/Single%20cell%20transcriptome%20revealed%20SARS-CoV-2%20entry%20genes%20enriched%20in%20colon%20tissues%20and%20associated%20with%20coronavirus%20infection%20and%20cytokine%20production.pdf.jpg1ef8a79475aa6a8477a28461801cbf93MD55open accessORIGINALSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdfSingle cell transcriptome revealed SARS-CoV-2 entry genes enriched in colon tissues and associated with coronavirus infection and cytokine production.pdfDocumento Reservadoapplication/pdf1604968https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/12689/3/Single%20cell%20transcriptome%20revealed%20SARS-CoV-2%20entry%20genes%20enriched%20in%20colon%20tissues%20and%20associated%20with%20coronavirus%20infection%20and%20cytokine%20production.pdf4f6ad1caa67d9d4393b4c57d22d12975MD53embargoed access|||2420-09-0420.500.12010/12689oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/126892020-09-04 08:18:35.121embargoed access|||2420-09-04Repositorio Institucional - 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