Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future
Until recently, a majority of the applications of X-ray computed tomography (CT) scanning in plant sciences remained descriptive; some included a quantification of the plant materials when the root-soil isolation or branch-leaf separation was satisfactory; and a few involved the modeling of plant bi...
- Autores:
- Tipo de recurso:
- Book
- Fecha de publicación:
- 2016
- Institución:
- Universidad de Bogotá Jorge Tadeo Lozano
- Repositorio:
- Expeditio: repositorio UTadeo
- Idioma:
- eng
- OAI Identifier:
- oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/14783
- Acceso en línea:
- https://www.frontiersin.org/research-topics/2132/branching-and-rooting-out-with-a-ct-scanner-the-why-the-how-and-the-outcomes-present-and-possibly-fu
http://hdl.handle.net/20.500.12010/14783
- Palabra clave:
- Botánica
Tomografía Computarizada (TC)
Imagen de plantas y fenotipado
Aplicaciones de estrés fitopatológico y ambiental
- Rights
- License
- Abierto (Texto Completo)
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dc.title.spa.fl_str_mv |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
title |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
spellingShingle |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future Botánica Tomografía Computarizada (TC) Imagen de plantas y fenotipado Aplicaciones de estrés fitopatológico y ambiental |
title_short |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
title_full |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
title_fullStr |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
title_full_unstemmed |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
title_sort |
Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future |
dc.subject.spa.fl_str_mv |
Botánica |
topic |
Botánica Tomografía Computarizada (TC) Imagen de plantas y fenotipado Aplicaciones de estrés fitopatológico y ambiental |
dc.subject.lemb.spa.fl_str_mv |
Tomografía Computarizada (TC) Imagen de plantas y fenotipado Aplicaciones de estrés fitopatológico y ambiental |
description |
Until recently, a majority of the applications of X-ray computed tomography (CT) scanning in plant sciences remained descriptive; some included a quantification of the plant materials when the root-soil isolation or branch-leaf separation was satisfactory; and a few involved the modeling of plant biology processes or the assessment of treatment or disease effects on plant biomass and structures during growth. In the last decade, repeated CT scanning of the same plants was reported in an increasing number of studies in which moderate doses of X-rays had been used. Besides the general objectives of Frontiers in Plant Science research topics, “Branching and Rooting Out with a CT Scanner” was proposed to meet specific objectives: (i) providing a non-technical update on knowledge about the application of CT scanning technology to plants, starting with the type of CT scanning data collected (CT images vs. CT numbers) and their processing in the graphical and numerical approaches; (ii) drawing the limits of the CT scanning approach, which because it is based on material density can distinguish materials with contrasting or moderately overlapping densities (e.g., branches vs. leaves, roots vs. non-organic soils) but not the others (e.g., roots vs. organic soils); (iii) explaining with a sufficient level of detail the main procedures used for graphical, quantitative and statistical analyses of plant CT scanning data, including fractal complexity measures and statistics appropriate for repeated plant CT scanning, in experiments where the research hypotheses are about biological processes such as light interception by canopies, root disease development and plant growth under stress conditions; (iv) comparing plant CT scanning with an alternative technology that applies to plants, such as the phenomics platforms which target leaf canopies; and (v) providing current and potential users of plant CT scanning with up-to-date information and exhaustive documentation, including clear perspectives and well-defined goals for the future, for them to be even more efficient or most efficient from start in their research work. |
publishDate |
2016 |
dc.date.created.none.fl_str_mv |
2016 |
dc.date.accessioned.none.fl_str_mv |
2020-10-22T20:05:51Z |
dc.date.available.none.fl_str_mv |
2020-10-22T20:05:51Z |
dc.type.local.spa.fl_str_mv |
Libro |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2f33 |
format |
http://purl.org/coar/resource_type/c_2f33 |
dc.identifier.isbn.none.fl_str_mv |
978-2-889-19791-0 |
dc.identifier.issn.none.fl_str_mv |
1664-8714 |
dc.identifier.other.none.fl_str_mv |
https://www.frontiersin.org/research-topics/2132/branching-and-rooting-out-with-a-ct-scanner-the-why-the-how-and-the-outcomes-present-and-possibly-fu |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/20.500.12010/14783 |
dc.identifier.doi.none.fl_str_mv |
10.3389/978-2-88919-791-0 |
identifier_str_mv |
978-2-889-19791-0 1664-8714 10.3389/978-2-88919-791-0 |
url |
https://www.frontiersin.org/research-topics/2132/branching-and-rooting-out-with-a-ct-scanner-the-why-the-how-and-the-outcomes-present-and-possibly-fu http://hdl.handle.net/20.500.12010/14783 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.references.spa.fl_str_mv |
Dutilleul, P., Lafond, J. A., eds. (2016). Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future. Lausanne: Frontiers Media. doi: 10.3389/978-2-88919-791-0 |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.local.spa.fl_str_mv |
Abierto (Texto Completo) |
dc.rights.creativecommons.none.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/legalcode |
rights_invalid_str_mv |
Abierto (Texto Completo) https://creativecommons.org/licenses/by/4.0/legalcode http://purl.org/coar/access_right/c_abf2 |
dc.format.extent.spa.fl_str_mv |
93 páginas |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Frontiers Media SA |
institution |
Universidad de Bogotá Jorge Tadeo Lozano |
bitstream.url.fl_str_mv |
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2020-10-22T20:05:51Z2020-10-22T20:05:51Z2016978-2-889-19791-01664-8714https://www.frontiersin.org/research-topics/2132/branching-and-rooting-out-with-a-ct-scanner-the-why-the-how-and-the-outcomes-present-and-possibly-fuhttp://hdl.handle.net/20.500.12010/1478310.3389/978-2-88919-791-093 páginasapplication/pdfengFrontiers Media SABotánicaTomografía Computarizada (TC)Imagen de plantas y fenotipadoAplicaciones de estrés fitopatológico y ambientalBranching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly FutureLibrohttp://purl.org/coar/resource_type/c_2f33Abierto (Texto Completo)https://creativecommons.org/licenses/by/4.0/legalcodehttp://purl.org/coar/access_right/c_abf2Dutilleul, P., Lafond, J. A., eds. (2016). Branching and Rooting Out with a CT Scanner: The Why, the How, and the Outcomes, Present and Possibly Future. Lausanne: Frontiers Media. doi: 10.3389/978-2-88919-791-0Until recently, a majority of the applications of X-ray computed tomography (CT) scanning in plant sciences remained descriptive; some included a quantification of the plant materials when the root-soil isolation or branch-leaf separation was satisfactory; and a few involved the modeling of plant biology processes or the assessment of treatment or disease effects on plant biomass and structures during growth. In the last decade, repeated CT scanning of the same plants was reported in an increasing number of studies in which moderate doses of X-rays had been used. Besides the general objectives of Frontiers in Plant Science research topics, “Branching and Rooting Out with a CT Scanner” was proposed to meet specific objectives: (i) providing a non-technical update on knowledge about the application of CT scanning technology to plants, starting with the type of CT scanning data collected (CT images vs. CT numbers) and their processing in the graphical and numerical approaches; (ii) drawing the limits of the CT scanning approach, which because it is based on material density can distinguish materials with contrasting or moderately overlapping densities (e.g., branches vs. leaves, roots vs. non-organic soils) but not the others (e.g., roots vs. organic soils); (iii) explaining with a sufficient level of detail the main procedures used for graphical, quantitative and statistical analyses of plant CT scanning data, including fractal complexity measures and statistics appropriate for repeated plant CT scanning, in experiments where the research hypotheses are about biological processes such as light interception by canopies, root disease development and plant growth under stress conditions; (iv) comparing plant CT scanning with an alternative technology that applies to plants, such as the phenomics platforms which target leaf canopies; and (v) providing current and potential users of plant CT scanning with up-to-date information and exhaustive documentation, including clear perspectives and well-defined goals for the future, for them to be even more efficient or most efficient from start in their research work.Dutilleul, PierreLafond, Jonathan A.ORIGINALBranching and Rooting Out with a CT Scanner - The Why, the How, and the Outcomes, Present and Possibly Future_39.PDFBranching and Rooting Out with a CT Scanner - The Why, the How, and the Outcomes, Present and Possibly Future_39.PDFVer documentoapplication/pdf19094202https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14783/1/Branching%20and%20Rooting%20Out%20with%20a%20CT%20Scanner%20-%20The%20Why%2c%20the%20How%2c%20and%20the%20Outcomes%2c%20Present%20and%20Possibly%20Future_39.PDF28283f101b53fb82e867c8260eb5a743MD51open accessLICENSElicense.txtlicense.txttext/plain; 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