International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium

We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) of 96 hospitals across five countries (www.covidclinical.net). Con...

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Autores:
Tipo de recurso:
Article of investigation
Fecha de publicación:
2020
Institución:
Universidad de Bogotá Jorge Tadeo Lozano
Repositorio:
Expeditio: repositorio UTadeo
Idioma:
eng
OAI Identifier:
oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/13361
Acceso en línea:
https://doi.org/10.1038/s41746-020-00308-0
http://hdl.handle.net/20.500.12010/13361
Palabra clave:
COVID-19
4CE consortium
Clinical course profiles
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
Rights
License
Abierto (Texto Completo)
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oai_identifier_str oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/13361
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dc.title.eng.fl_str_mv International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
title International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
spellingShingle International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
COVID-19
4CE consortium
Clinical course profiles
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
title_short International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
title_full International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
title_fullStr International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
title_full_unstemmed International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
title_sort International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
dc.subject.spa.fl_str_mv COVID-19
4CE consortium
Clinical course profiles
topic COVID-19
4CE consortium
Clinical course profiles
Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
dc.subject.lemb.spa.fl_str_mv Síndrome respiratorio agudo grave
COVID-19
SARS-CoV-2
Coronavirus
description We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) of 96 hospitals across five countries (www.covidclinical.net). Contributors utilized the Informatics for Integrating Biology and the Bedside (i2b2) or Observational Medical Outcomes Partnership (OMOP) platforms to map to a common data model. The group focused on temporal changes in key laboratory test values. Harmonized data were analyzed locally and converted to a shared aggregate form for rapid analysis and visualization of regional differences and global commonalities. Data covered 27,584 COVID-19 cases with 187,802 laboratory tests. Case counts and laboratory trajectories were concordant with existing literature. Laboratory tests at the time of diagnosis showed hospital-level differences equivalent to country-level variation across the consortium partners. Despite the limitations of decentralized data generation, we established a framework to capture the trajectory of COVID-19 disease in patients and their response to interventions.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2020-09-17T16:26:07Z
dc.date.available.none.fl_str_mv 2020-09-17T16:26:07Z
dc.date.created.none.fl_str_mv 2020
dc.type.local.spa.fl_str_mv Artículo
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
format http://purl.org/coar/resource_type/c_2df8fbb1
dc.identifier.issn.spa.fl_str_mv 2398-6352
dc.identifier.other.spa.fl_str_mv https://doi.org/10.1038/s41746-020-00308-0
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12010/13361
dc.identifier.doi.spa.fl_str_mv https://doi.org/10.1038/s41746-020-00308-0
identifier_str_mv 2398-6352
url https://doi.org/10.1038/s41746-020-00308-0
http://hdl.handle.net/20.500.12010/13361
dc.language.iso.spa.fl_str_mv eng
language eng
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.local.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.extent.spa.fl_str_mv 9 páginas
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Digital medicine
dc.source.spa.fl_str_mv reponame:Expeditio Repositorio Institucional UJTL
instname:Universidad de Bogotá Jorge Tadeo Lozano
instname_str Universidad de Bogotá Jorge Tadeo Lozano
institution Universidad de Bogotá Jorge Tadeo Lozano
reponame_str Expeditio Repositorio Institucional UJTL
collection Expeditio Repositorio Institucional UJTL
bitstream.url.fl_str_mv https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13361/1/s41746-020-00308-0.pdf
https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13361/2/license.txt
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spelling 2020-09-17T16:26:07Z2020-09-17T16:26:07Z20202398-6352https://doi.org/10.1038/s41746-020-00308-0http://hdl.handle.net/20.500.12010/13361https://doi.org/10.1038/s41746-020-00308-0We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) of 96 hospitals across five countries (www.covidclinical.net). Contributors utilized the Informatics for Integrating Biology and the Bedside (i2b2) or Observational Medical Outcomes Partnership (OMOP) platforms to map to a common data model. The group focused on temporal changes in key laboratory test values. Harmonized data were analyzed locally and converted to a shared aggregate form for rapid analysis and visualization of regional differences and global commonalities. Data covered 27,584 COVID-19 cases with 187,802 laboratory tests. Case counts and laboratory trajectories were concordant with existing literature. Laboratory tests at the time of diagnosis showed hospital-level differences equivalent to country-level variation across the consortium partners. Despite the limitations of decentralized data generation, we established a framework to capture the trajectory of COVID-19 disease in patients and their response to interventions.9 páginasapplication/pdfengDigital medicinereponame:Expeditio Repositorio Institucional UJTLinstname:Universidad de Bogotá Jorge Tadeo LozanoCOVID-194CE consortiumClinical course profilesSíndrome respiratorio agudo graveCOVID-19SARS-CoV-2CoronavirusInternational electronic health record-derived COVID-19 clinical course profiles: the 4CE consortiumArtículohttp://purl.org/coar/resource_type/c_2df8fbb1Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Brat, Gabriel A.Weber, Griffin M.Gehlenborg, NilsAvillach, PaulPalmer, Nathan P.Chiovato, LucaCimino, JamesWaitman, Lemuel R.Omenn, Gilbert S.Malovini, AlbertoMoore, Jason H.Beaulieu-Jones, Brett K.Tibollo, ValentinaMurphy, Shawn N.Yi, Sehi L’Keller, Mark S.Bellazzi, RiccardoHanauer, David A.Serret-Larmande, ArnaudGutierrez-Sacristan, AlbaHolmes, John J.Bell, Douglas S.Mandl, Kenneth D.Follett, Robert W.Klann, Jeffrey G.Murad1, Douglas A.Scudeller, LuigiaBucalo, MauroKirchof, KatieCraig1, JeanObeid, JihadJouhet, VianneyGriffier, RomainCossin, SebastienMoal, BertrandPatel, Lav P.Bellasi, AntonioProkosch, Hans U.Kraska, DetlefSliz, PiotrTan, Amelia L. M.Ngiam, Kee YuanZambelli, AlbertoMowery, Danielle L.Schive, EmilyDevkota, BatsalBradford, Robert L.Daniar1, MohamadDaniel, ChristelBenoit, VincentBey, RomainParis, NicolasSerre, PatriciaOrlova, NinaDubiel, JulienHilka, MartinJannot, Anne SophieBreant, StephaneLeblanc, JudithGriffon, NicolasBurgun, AnitaBernaux, MelodieSandrin, ArnaudSalamanca, ElisaCormont, SylvieGanslandt, ThomasGradinger, TobiasChamp, JulienBoeker, MartinMartel, PatriciaEsteve, LoicGramfort, AlexandreGrisel, OlivierLeprovost, DamienMoreau, ThomasVaroquaux, GaelVie, Jill-JênnWassermann, DemianMensch, ArthurCaucheteux, CharlotteHaverkamp, ChristianLemaitre, GuillaumeBosari, SilvanoKrantz, Ian D.South, AndrewCai, TianxiKohane, Isaac S.ORIGINALs41746-020-00308-0.pdfs41746-020-00308-0.pdfVer artículoapplication/pdf2375243https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13361/1/s41746-020-00308-0.pdf9bff10a87d2a0f37b873accd66d317baMD51open accessLICENSElicense.txtlicense.txttext/plain; charset=utf-82938https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13361/2/license.txtabceeb1c943c50d3343516f9dbfc110fMD52open accessTHUMBNAILs41746-020-00308-0.pdf.jpgs41746-020-00308-0.pdf.jpgIM Thumbnailimage/jpeg26514https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13361/3/s41746-020-00308-0.pdf.jpg81d477f4ee455140627ee148a1c4a5a2MD53open access20.500.12010/13361oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/133612020-09-17 11:27:49.207open accessRepositorio Institucional - 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