The Pangenome
This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology...
- Autores:
- Tipo de recurso:
- Book
- Fecha de publicación:
- 2020
- Institución:
- Universidad de Bogotá Jorge Tadeo Lozano
- Repositorio:
- Expeditio: repositorio UTadeo
- Idioma:
- eng
- OAI Identifier:
- oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/14163
- Acceso en línea:
- https://www.springer.com/la/book/9783030382803#otherversion=9783030382810
http://hdl.handle.net/20.500.12010/14163
https://doi.org/10.1007/978-3-030-38281-0
- Palabra clave:
- Biology
Mathematics
Ecology
Medicine
Metagenomics
Microbial population analysis
Pangenome profile
Supra genome analysis
Computational tools
Selection
Recombination
Composition
Microevolution
Open access
Pan metagenomics
Pan microbiomics
Pan epigenome
Evolution
Microbial genetics and genomics
Evolutionary biology
Genetics and population dynamics
Microbial ecology
Human genetics
Genetics and genomics
Comparative genomics
Adaptive evolution
Bioinformatic genomics
Core dispensable genome
Acquired resistance
Bacterial species concept
Genomic diversity
Bacterial ecology
Pan phenomes
Microbiology (non-medical)
Genetics (non-medical)
Ecological science
The biosphere
Medical genetics
Applied mathematics
Gene transfer
- Rights
- License
- Abierto (Texto Completo)
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|
dc.title.spa.fl_str_mv |
The Pangenome |
dc.title.alternative.spa.fl_str_mv |
Diversity, Dynamics and Evolution of Genomes |
title |
The Pangenome |
spellingShingle |
The Pangenome Biology Mathematics Ecology Medicine Metagenomics Microbial population analysis Pangenome profile Supra genome analysis Computational tools Selection Recombination Composition Microevolution Open access Pan metagenomics Pan microbiomics Pan epigenome Evolution Microbial genetics and genomics Evolutionary biology Genetics and population dynamics Microbial ecology Human genetics Genetics and genomics Comparative genomics Adaptive evolution Bioinformatic genomics Core dispensable genome Acquired resistance Bacterial species concept Genomic diversity Bacterial ecology Pan phenomes Microbiology (non-medical) Genetics (non-medical) Ecological science The biosphere Medical genetics Applied mathematics Gene transfer |
title_short |
The Pangenome |
title_full |
The Pangenome |
title_fullStr |
The Pangenome |
title_full_unstemmed |
The Pangenome |
title_sort |
The Pangenome |
dc.subject.spa.fl_str_mv |
Biology Mathematics Ecology Medicine Metagenomics Microbial population analysis Pangenome profile Supra genome analysis Computational tools Selection Recombination Composition Microevolution Open access Pan metagenomics Pan microbiomics Pan epigenome Evolution |
topic |
Biology Mathematics Ecology Medicine Metagenomics Microbial population analysis Pangenome profile Supra genome analysis Computational tools Selection Recombination Composition Microevolution Open access Pan metagenomics Pan microbiomics Pan epigenome Evolution Microbial genetics and genomics Evolutionary biology Genetics and population dynamics Microbial ecology Human genetics Genetics and genomics Comparative genomics Adaptive evolution Bioinformatic genomics Core dispensable genome Acquired resistance Bacterial species concept Genomic diversity Bacterial ecology Pan phenomes Microbiology (non-medical) Genetics (non-medical) Ecological science The biosphere Medical genetics Applied mathematics Gene transfer |
dc.subject.lemb.spa.fl_str_mv |
Microbial genetics and genomics Evolutionary biology Genetics and population dynamics Microbial ecology Human genetics Genetics and genomics Comparative genomics Adaptive evolution Bioinformatic genomics Core dispensable genome Acquired resistance Bacterial species concept Genomic diversity Bacterial ecology Pan phenomes |
dc.subject.keyword.spa.fl_str_mv |
Microbiology (non-medical) Genetics (non-medical) Ecological science The biosphere Medical genetics Applied mathematics Gene transfer |
description |
This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book’s respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics. |
publishDate |
2020 |
dc.date.accessioned.none.fl_str_mv |
2020-10-03T02:15:55Z |
dc.date.available.none.fl_str_mv |
2020-10-03T02:15:55Z |
dc.date.created.none.fl_str_mv |
2020-05-14 |
dc.type.local.spa.fl_str_mv |
Libro |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2f33 |
format |
http://purl.org/coar/resource_type/c_2f33 |
dc.identifier.isbn.none.fl_str_mv |
978-3-030-38281-0 978-3-030-38280-3 |
dc.identifier.other.none.fl_str_mv |
https://www.springer.com/la/book/9783030382803#otherversion=9783030382810 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/20.500.12010/14163 |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1007/978-3-030-38281-0 |
identifier_str_mv |
978-3-030-38281-0 978-3-030-38280-3 |
url |
https://www.springer.com/la/book/9783030382803#otherversion=9783030382810 http://hdl.handle.net/20.500.12010/14163 https://doi.org/10.1007/978-3-030-38281-0 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.local.spa.fl_str_mv |
Abierto (Texto Completo) |
dc.rights.creativecommons.none.fl_str_mv |
http://creativecommons.org/licenses/by/4.0/ |
rights_invalid_str_mv |
Abierto (Texto Completo) http://creativecommons.org/licenses/by/4.0/ http://purl.org/coar/access_right/c_abf2 |
dc.format.extent.spa.fl_str_mv |
311 páginas |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Springer Nature |
institution |
Universidad de Bogotá Jorge Tadeo Lozano |
bitstream.url.fl_str_mv |
https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14163/1/Book_ThePangenome.pdf https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14163/2/license.txt https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14163/3/Book_ThePangenome.pdf.jpg |
bitstream.checksum.fl_str_mv |
3c4874b741029a629c02f60875b2aef0 abceeb1c943c50d3343516f9dbfc110f 403b1f5e5185ef01b3575a1b4ffa5015 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio Institucional - Universidad Jorge Tadeo Lozano |
repository.mail.fl_str_mv |
expeditio@utadeo.edu.co |
_version_ |
1814213851838676992 |
spelling |
2020-10-03T02:15:55Z2020-10-03T02:15:55Z2020-05-14978-3-030-38281-0978-3-030-38280-3https://www.springer.com/la/book/9783030382803#otherversion=9783030382810http://hdl.handle.net/20.500.12010/14163https://doi.org/10.1007/978-3-030-38281-0311 páginasapplication/pdfengSpringer NatureBiologyMathematicsEcologyMedicineMetagenomicsMicrobial population analysisPangenome profileSupra genome analysisComputational toolsSelectionRecombinationCompositionMicroevolutionOpen accessPan metagenomicsPan microbiomicsPan epigenomeEvolutionMicrobial genetics and genomicsEvolutionary biologyGenetics and population dynamicsMicrobial ecologyHuman geneticsGenetics and genomicsComparative genomicsAdaptive evolutionBioinformatic genomicsCore dispensable genomeAcquired resistanceBacterial species conceptGenomic diversityBacterial ecologyPan phenomesMicrobiology (non-medical)Genetics (non-medical)Ecological scienceThe biosphereMedical geneticsApplied mathematicsGene transferThe PangenomeDiversity, Dynamics and Evolution of GenomesLibrohttp://purl.org/coar/resource_type/c_2f33Abierto (Texto Completo)http://creativecommons.org/licenses/by/4.0/http://purl.org/coar/access_right/c_abf2This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book’s respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics.Tettelin, HervéMedini, DuccioORIGINALBook_ThePangenome.pdfBook_ThePangenome.pdfVer documentoapplication/pdf9205239https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14163/1/Book_ThePangenome.pdf3c4874b741029a629c02f60875b2aef0MD51open accessLICENSElicense.txtlicense.txttext/plain; charset=utf-82938https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14163/2/license.txtabceeb1c943c50d3343516f9dbfc110fMD52open accessTHUMBNAILBook_ThePangenome.pdf.jpgBook_ThePangenome.pdf.jpgIM Thumbnailimage/jpeg13315https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14163/3/Book_ThePangenome.pdf.jpg403b1f5e5185ef01b3575a1b4ffa5015MD53open access20.500.12010/14163oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/141632021-02-23 15:53:17.828open accessRepositorio Institucional - Universidad Jorge Tadeo Lozanoexpeditio@utadeo.edu.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 |