Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia

The loggerhead sea turtle (Caretta caretta) occurs throughout tropical, subtropical and temperate waters (Bolten & Witherington 2003). Once considered to be a nesting population of ~500 females, currently the loggerhead rookery along the Caribbean coast of Colombia is reported to be greatly redu...

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Autores:
Tipo de recurso:
Article of journal
Fecha de publicación:
2012
Institución:
Universidad de Bogotá Jorge Tadeo Lozano
Repositorio:
Expeditio: repositorio UTadeo
Idioma:
spa
OAI Identifier:
oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/13016
Acceso en línea:
https://www.researchgate.net/publication/230822583_Description_of_mtDNA_Markers_of_Loggerhead_Marine_Turtlesfrom_Caribbean_Colombia
http://hdl.handle.net/20.500.12010/13016
Palabra clave:
Turtle
Molecular
Turtles
Colombian Caribbean
Phylogenetic analysis
Loggerhead marine turtles
Rights
License
http://creativecommons.org/licenses/by-nc-nd/4.0
id UTADEO2_30ad3f65c7e15caa7ed7e1ae2db8a97f
oai_identifier_str oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/13016
network_acronym_str UTADEO2
network_name_str Expeditio: repositorio UTadeo
repository_id_str
dc.title.spa.fl_str_mv Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
title Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
spellingShingle Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
Turtle
Molecular
Turtles
Colombian Caribbean
Phylogenetic analysis
Loggerhead marine turtles
title_short Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
title_full Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
title_fullStr Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
title_full_unstemmed Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
title_sort Description of mtDNA Markers of Loggerhead Marine Turtles from Caribbean Colombia
dc.subject.spa.fl_str_mv Turtle
Molecular
Turtles
Colombian Caribbean
topic Turtle
Molecular
Turtles
Colombian Caribbean
Phylogenetic analysis
Loggerhead marine turtles
dc.subject.keyword.spa.fl_str_mv Phylogenetic analysis
Loggerhead marine turtles
description The loggerhead sea turtle (Caretta caretta) occurs throughout tropical, subtropical and temperate waters (Bolten & Witherington 2003). Once considered to be a nesting population of ~500 females, currently the loggerhead rookery along the Caribbean coast of Colombia is reported to be greatly reduced in size (Amorocho 2003). This population in Northern Colombia is considered to be part of the Northwestern Atlantic regional population (Conant et al. 2009), although detailed population structure data, based on molecular markers, are lacking from loggerheads that occur here. As a first step toward elucidating the relationship between loggerheads from Colombia and those from throughout the Wider Caribbean, we conducted preliminary assessments of mitochondrial DNA (mtDNA) haplotypes of nesting and foraging loggerhead turtles sampled in Colombia, using direct sequencing and phylogenetic inference. During 2008 and 2009, we collected blood samples from the dorsal cervical sinus from eight loggerhead turtles of the Colombian Caribbean: five nesting females from Don Diego beach (11°16’N, 73°45’W) and three juvenile turtles captured while they were foraging around San Martin de Pajarales Island (10°11’N, 75°47’W). Genomic DNA was extracted from each blood sample using a commercial kit (UltraClean™ Tissues & Cells, MO BIO Laboratories, Inc, California, USA).
publishDate 2012
dc.date.created.none.fl_str_mv 2012
dc.date.accessioned.none.fl_str_mv 2020-09-09T19:45:01Z
dc.date.available.none.fl_str_mv 2020-09-09T19:45:01Z
dc.type.local.spa.fl_str_mv Artículo
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_6501
format http://purl.org/coar/resource_type/c_6501
dc.identifier.issn.spa.fl_str_mv 0839-7708
dc.identifier.other.spa.fl_str_mv https://www.researchgate.net/publication/230822583_Description_of_mtDNA_Markers_of_Loggerhead_Marine_Turtlesfrom_Caribbean_Colombia
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12010/13016
identifier_str_mv 0839-7708
url https://www.researchgate.net/publication/230822583_Description_of_mtDNA_Markers_of_Loggerhead_Marine_Turtlesfrom_Caribbean_Colombia
http://hdl.handle.net/20.500.12010/13016
dc.language.iso.spa.fl_str_mv spa
language spa
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.license.spa.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0
dc.rights.local.spa.fl_str_mv Abierto (Texto Completo)
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0
Abierto (Texto Completo)
http://purl.org/coar/access_right/c_abf2
dc.format.extent.spa.fl_str_mv 2 páginas
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.coverage.spatial.spa.fl_str_mv Colombia
dc.publisher.spa.fl_str_mv Marine Turtle Newsletter - Universitas scientiarum
dc.source.spa.fl_str_mv instname:Universidad Jorge Tadeo Lozano
reponame:Repositorio Institucional UJTL
instname_str Universidad Jorge Tadeo Lozano
institution Universidad de Bogotá Jorge Tadeo Lozano
reponame_str Repositorio Institucional UJTL
collection Repositorio Institucional UJTL
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https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13016/2/license.txt
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spelling EL AUTOR, manifiesta que la obra objeto de la presente autorización es original y la realizó sin violar o usurpar derechos de autor de terceros, por lo tanto la obra es de exclusiva autoría y tiene la titularidad sobre la misma. PARGRAFO: En caso de presentarse cualquier reclamación o acción por parte de un tercero en cuanto a los derechos de autor sobre la obra en cuestión, EL AUTOR, asumirá toda la responsabilidad, y saldrá en defensa de los derechos aquí autorizados; para todos los efectos la universidad actúa como un tercero de buena fe. EL AUTOR, autoriza a LA UNIVERSIDAD DE BOGOTA JORGE TADEO LOZANO, para que en los términos establecidos en la Ley 23 de 1982, Ley 44 de 1993, Decisión andina 351 de 1993, Decreto 460 de 1995 y demás normas generales sobre la materia, utilice y use la obra objeto de la presente autorización. POLITICA DE TRATAMIENTO DE DATOS PERSONALES. Declaro que autorizo previa y de forma informada el tratamiento de mis datos personales por parte de LA UNIVERSIDAD DE BOGOTÁ JORGE TADEO LOZANO para fines académicos y en aplicación de convenios con terceros o servicios conexos con actividades propias de la academia, con estricto cumplimiento de los principios de ley. Para el correcto ejercicio de mi derecho de habeas data cuento con la cuenta de correo protecciondatos@utadeo.edu.co, donde previa identificación podré solicitar la consulta, corrección y supresión de mis datoshttp://creativecommons.org/licenses/by-nc-nd/4.0Abierto (Texto Completo)http://purl.org/coar/access_right/c_abf2Colombia2020-09-09T19:45:01Z2020-09-09T19:45:01Z20120839-7708https://www.researchgate.net/publication/230822583_Description_of_mtDNA_Markers_of_Loggerhead_Marine_Turtlesfrom_Caribbean_Colombiahttp://hdl.handle.net/20.500.12010/13016The loggerhead sea turtle (Caretta caretta) occurs throughout tropical, subtropical and temperate waters (Bolten & Witherington 2003). Once considered to be a nesting population of ~500 females, currently the loggerhead rookery along the Caribbean coast of Colombia is reported to be greatly reduced in size (Amorocho 2003). This population in Northern Colombia is considered to be part of the Northwestern Atlantic regional population (Conant et al. 2009), although detailed population structure data, based on molecular markers, are lacking from loggerheads that occur here. As a first step toward elucidating the relationship between loggerheads from Colombia and those from throughout the Wider Caribbean, we conducted preliminary assessments of mitochondrial DNA (mtDNA) haplotypes of nesting and foraging loggerhead turtles sampled in Colombia, using direct sequencing and phylogenetic inference. During 2008 and 2009, we collected blood samples from the dorsal cervical sinus from eight loggerhead turtles of the Colombian Caribbean: five nesting females from Don Diego beach (11°16’N, 73°45’W) and three juvenile turtles captured while they were foraging around San Martin de Pajarales Island (10°11’N, 75°47’W). Genomic DNA was extracted from each blood sample using a commercial kit (UltraClean™ Tissues & Cells, MO BIO Laboratories, Inc, California, USA).2 páginasapplication/pdfspaMarine Turtle Newsletter - Universitas scientiaruminstname:Universidad Jorge Tadeo Lozanoreponame:Repositorio Institucional UJTLTurtleMolecularTurtlesColombian CaribbeanPhylogenetic analysisLoggerhead marine turtlesDescription of mtDNA Markers of Loggerhead Marine Turtles from Caribbean ColombiaArtículohttp://purl.org/coar/resource_type/c_6501Franco Espinosa, CarolinaHernández Fernández, JavierORIGINALDescription of mtDNA Markers of Loggerhead Marine Turtles from caribbean colombian.pdfDescription of mtDNA Markers of Loggerhead Marine Turtles from caribbean colombian.pdfVer documentoapplication/pdf148575https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13016/1/Description%20of%20mtDNA%20Markers%20of%20Loggerhead%20Marine%20Turtles%20from%20caribbean%20colombian.pdf479369c4e43c207609541cc6977ad779MD51open accessLICENSElicense.txtlicense.txttext/plain; charset=utf-82938https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13016/2/license.txtabceeb1c943c50d3343516f9dbfc110fMD52open accessTHUMBNAILDescription of mtDNA Markers of Loggerhead Marine Turtles from caribbean colombian.pdf.jpgDescription of mtDNA Markers of Loggerhead Marine Turtles from caribbean colombian.pdf.jpgIM Thumbnailimage/jpeg17992https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/13016/3/Description%20of%20mtDNA%20Markers%20of%20Loggerhead%20Marine%20Turtles%20from%20caribbean%20colombian.pdf.jpgfc867eb182a220e154b339a6527c9f41MD53open access20.500.12010/13016oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/130162024-04-04 18:17:13.242open accessRepositorio Institucional - Universidad Jorge Tadeo Lozanoexpeditiorepositorio@utadeo.edu.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