Pulmonary adenocarcinoma characterization using computed tomography images
Lung cancer is one of the pathologies that sensitively affects the health of human beings. Particularly, the pathology called pulmonary adenocarcinoma represents 25% of all lung cancers. In this research, we propose a semiautomatic technique for the characterization of a tumor (adenocarcinoma type),...
- Autores:
-
Huérfano, Y
Vera, M
Valbuena, O
Gelvez-Almeida, E
Salazar-Torres, J
- Tipo de recurso:
- Fecha de publicación:
- 2019
- Institución:
- Universidad Simón Bolívar
- Repositorio:
- Repositorio Digital USB
- Idioma:
- eng
- OAI Identifier:
- oai:bonga.unisimon.edu.co:20.500.12442/5104
- Acceso en línea:
- https://hdl.handle.net/20.500.12442/5104
- Palabra clave:
- Rights
- License
- Attribution-NonCommercial-NoDerivatives 4.0 Internacional
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dc.title.eng.fl_str_mv |
Pulmonary adenocarcinoma characterization using computed tomography images |
title |
Pulmonary adenocarcinoma characterization using computed tomography images |
spellingShingle |
Pulmonary adenocarcinoma characterization using computed tomography images |
title_short |
Pulmonary adenocarcinoma characterization using computed tomography images |
title_full |
Pulmonary adenocarcinoma characterization using computed tomography images |
title_fullStr |
Pulmonary adenocarcinoma characterization using computed tomography images |
title_full_unstemmed |
Pulmonary adenocarcinoma characterization using computed tomography images |
title_sort |
Pulmonary adenocarcinoma characterization using computed tomography images |
dc.creator.fl_str_mv |
Huérfano, Y Vera, M Valbuena, O Gelvez-Almeida, E Salazar-Torres, J |
dc.contributor.author.none.fl_str_mv |
Huérfano, Y Vera, M Valbuena, O Gelvez-Almeida, E Salazar-Torres, J |
description |
Lung cancer is one of the pathologies that sensitively affects the health of human beings. Particularly, the pathology called pulmonary adenocarcinoma represents 25% of all lung cancers. In this research, we propose a semiautomatic technique for the characterization of a tumor (adenocarcinoma type), present in a three-dimensional pulmonary computed tomography dataset. Following the basic scheme of digital image processing, first, a bank of smoothing filters and edge detectors is applied allowing the adequate preprocessing over the dataset images. Then, clustering methods are used for obtaining the tumor morphology. The relative percentage error and the accuracy rate were the metrics considered to determine the performance of the proposed technique. The values obtained from the metrics used reflect an excellent correlation between the morphology of the tumor, generated manually by a pneumologist and the values obtained by the proposed technique. In the clinical and surgical contexts, the characterization of the detected lung tumor is made in terms of volume occupied by the tumor and it allows the monitoring of this disease as well as the activation of the respective protocols for its approach. |
publishDate |
2019 |
dc.date.issued.none.fl_str_mv |
2019 |
dc.date.accessioned.none.fl_str_mv |
2020-04-14T22:30:28Z |
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2020-04-14T22:30:28Z |
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article |
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17426596 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/20.500.12442/5104 |
identifier_str_mv |
17426596 |
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https://hdl.handle.net/20.500.12442/5104 |
dc.language.iso.eng.fl_str_mv |
eng |
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eng |
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Attribution-NonCommercial-NoDerivatives 4.0 Internacional |
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http://creativecommons.org/licenses/by-nc-nd/4.0/ |
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Attribution-NonCommercial-NoDerivatives 4.0 Internacional http://creativecommons.org/licenses/by-nc-nd/4.0/ http://purl.org/coar/access_right/c_abf2 |
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pdf |
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IOP Publishing |
dc.source.eng.fl_str_mv |
Journal of Physics: Conference Series Vol. 1408 (2019) |
institution |
Universidad Simón Bolívar |
dc.source.uri.eng.fl_str_mv |
https://iopscience.iop.org/article/10.1088/1742-6596/1408/1/012004 |
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Huérfano, Y001cc35e-75ac-48b8-9fd0-3c22464ff80fVera, M847eada8-99d3-4ff1-a613-ae3f62c30f9eValbuena, O4286f2e0-ce46-49ce-a106-bd00c21a76e9Gelvez-Almeida, E55062614-d175-4da1-834a-d7e54dcc92deSalazar-Torres, J40a2a6c9-3e39-4994-9b5a-1c6112bd80002020-04-14T22:30:28Z2020-04-14T22:30:28Z201917426596https://hdl.handle.net/20.500.12442/5104Lung cancer is one of the pathologies that sensitively affects the health of human beings. Particularly, the pathology called pulmonary adenocarcinoma represents 25% of all lung cancers. In this research, we propose a semiautomatic technique for the characterization of a tumor (adenocarcinoma type), present in a three-dimensional pulmonary computed tomography dataset. Following the basic scheme of digital image processing, first, a bank of smoothing filters and edge detectors is applied allowing the adequate preprocessing over the dataset images. Then, clustering methods are used for obtaining the tumor morphology. The relative percentage error and the accuracy rate were the metrics considered to determine the performance of the proposed technique. The values obtained from the metrics used reflect an excellent correlation between the morphology of the tumor, generated manually by a pneumologist and the values obtained by the proposed technique. In the clinical and surgical contexts, the characterization of the detected lung tumor is made in terms of volume occupied by the tumor and it allows the monitoring of this disease as well as the activation of the respective protocols for its approach.pdfengIOP PublishingAttribution-NonCommercial-NoDerivatives 4.0 Internacionalhttp://creativecommons.org/licenses/by-nc-nd/4.0/http://purl.org/coar/access_right/c_abf2Journal of Physics: Conference SeriesVol. 1408 (2019)https://iopscience.iop.org/article/10.1088/1742-6596/1408/1/012004Pulmonary adenocarcinoma characterization using computed tomography imagesarticlearticlehttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Guyton J 2006 Textbook of medical physiology (USA: Elsevier Saunders)Alberg A, Samet J 2003 Epidemiology of lung cancer Chest 123(1) 21sAit B, El Hassani A, Majda A 2018 Lung ct image segmentation using deep neural networks Procedia Computer Science 127 109Mingjie X, Shouliang Q, Yong Y, Yueyang T, Lisheng X, Yudong Y, Wei Q 2019 Segmentation of lung parenchyma in ct images using cnn trained with the clustering algorithm generated dataset Biomed Eng Online 18(2) 1Charbonnier J, Chung K, Scholten E, Van Rikxoort E, Jacobs C, Sverzellati N, Silva M, Pastorino U, Van Ginneken B, Ciompi F 2018 Automatic segmentation of the solid core and enclosed vessels in subsolid pulmonary nodules Sci Rep. 8 646Kubota T, Jerebko A, Dewan M, Salganicoff M, Krishnan A 2011 Density and attachment agnostic ct pulmonary nodule segmentation with competition-diffusion and new morphological operators Multi modality state-of-the-art medical image segmentation and registration methodologies ed A. El-Baz (Boston: Springer)Alilou, M, Beig N, Orooji M, Rajiah P, Velcheti V, Rakshit S, Reddy N, Yang M, Jacono F, Gilkeson R, Linden P, Madabhushi A 2017 An integrated segmentation and shape-based classification scheme for distinguishing adenocarcinomas from granulomas on lung ct Med Phys. 44(7) 3556Wang S, Chen A, Yang L, Cai L, Xie Y, Fujimoto J, Gazdar A, Xiao G 2018 Comprehensive analysis of lung cancer pathology images to discover tumor shape and boundary features that predict survival outcome Scientific Reports 8(1) 10393Yang B, Xiang D, Yu F, Chen X 2018 Lung tumor segmentation based on the multi-scale template matching and region growing Proc. SPIE, Medical Imaging 2018: Biomedical Applications in Molecular, Structural, and Functional Imaging 10578 105782QHuérfano Y, Vera M, Mar A, Bravo A 2019 Integrating a gradient–based difference operator with machine learning techniques in right heart segmentation. J. Phys. Conf. Ser. 1160 012003Pratt W 2007 Digital image processing (Unite State of America: John Wiley & Sons Inc)Meijering H 2000 Image enhancement in digital x ray angiography doctoral dissertation (Netherlands: Utrecht University)González R, Woods R 2001 Digital image processing (New Jersey: Prentice Hall)Saénz F, Vera M, Huérfano Y, Molina V, Martinez L, Vera MI, Salazar W, Gelvez E, Salazar J, Valbuena O, Robles H, Bautista M, Arango J 2018 Brain hematoma computational segmentation. J. Phys. Conf. Ser. 1126 012071Dice L 1945 Measures of the amount of ecologic associationn between species Ecology 26(3) 29ORIGINALPDF.pdfPDF.pdfPDFapplication/pdf957447https://bonga.unisimon.edu.co/bitstreams/f7bb7325-fde7-4891-b90c-9d27f341ccbd/downloaddf1ab0f0b17b4b881379a60d26d8ba05MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805https://bonga.unisimon.edu.co/bitstreams/b2132428-5379-49e0-893e-73df8abf2e96/download4460e5956bc1d1639be9ae6146a50347MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-8381https://bonga.unisimon.edu.co/bitstreams/da0e89c8-53ef-4816-bb3a-6911ccb9b15a/download733bec43a0bf5ade4d97db708e29b185MD53TEXTPulmonary_adenocarcinoma_characterizationbyCTI.pdf.txtPulmonary_adenocarcinoma_characterizationbyCTI.pdf.txtExtracted texttext/plain17665https://bonga.unisimon.edu.co/bitstreams/ea1ea861-13a1-4be2-a044-38f2aa402b81/download8c62f6bcb61bb7fb44c39097f2bb9eb9MD54PDF.pdf.txtPDF.pdf.txtExtracted texttext/plain18205https://bonga.unisimon.edu.co/bitstreams/846b5187-5a33-4fc4-bc06-5abbcb2263b1/downloadd80d44e17399089c2ef9f109f16b609cMD56THUMBNAILPulmonary_adenocarcinoma_characterizationbyCTI.pdf.jpgPulmonary_adenocarcinoma_characterizationbyCTI.pdf.jpgGenerated Thumbnailimage/jpeg1287https://bonga.unisimon.edu.co/bitstreams/f03f47d1-4aa7-4afa-9235-0de4acf8c25b/download96d9508de78a2e796721a7988fe7b9b0MD55PDF.pdf.jpgPDF.pdf.jpgGenerated Thumbnailimage/jpeg3312https://bonga.unisimon.edu.co/bitstreams/f7faafe2-6687-40ed-8581-6e8f3b002491/download0ae723399d0e1e6a41817d85f6baf623MD5720.500.12442/5104oai:bonga.unisimon.edu.co:20.500.12442/51042024-08-14 21:53:43.704http://creativecommons.org/licenses/by-nc-nd/4.0/Attribution-NonCommercial-NoDerivatives 4.0 Internacionalopen.accesshttps://bonga.unisimon.edu.coRepositorio Digital Universidad Simón Bolívarrepositorio.digital@unisimon.edu.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 |