The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain

Currently, no specific licensed antiviral exists for treating the illness caused by dengue virus (DENV). Therefore, the search for compounds of natural origin with antiviral activity is an important area of research. In the present study, three compounds were isolated and identified from seeds of Ta...

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Autores:
Monsalve-Escudero, Laura Milena
Tipo de recurso:
Fecha de publicación:
2021
Institución:
Universidad del Atlántico
Repositorio:
Repositorio Uniatlantico
Idioma:
eng
OAI Identifier:
oai:repositorio.uniatlantico.edu.co:20.500.12834/1160
Acceso en línea:
https://hdl.handle.net/20.500.12834/1160
Palabra clave:
dengue virus; Tabernaemontana cymosa; indole alkaloids; molecular docking; antivirals
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openAccess
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http://creativecommons.org/licenses/by-nc/4.0/
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dc.title.spa.fl_str_mv The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
dc.title.alternative.spa.fl_str_mv The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
title The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
spellingShingle The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
dengue virus; Tabernaemontana cymosa; indole alkaloids; molecular docking; antivirals
title_short The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
title_full The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
title_fullStr The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
title_full_unstemmed The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
title_sort The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain
dc.creator.fl_str_mv Monsalve-Escudero, Laura Milena
dc.contributor.author.none.fl_str_mv Monsalve-Escudero, Laura Milena
dc.contributor.other.none.fl_str_mv Loaiza-Cano, Vanessa
Zapata-Cardona, Maria Isabel
Quintero-Gil, Diana Carolina
Hernández-Mira, Estiven
Pájaro-González, Yina
Oliveros-Díaz, Andrés Felipe
Diaz-Castillo, Fredyc
Quiñones, Wistón
Robledo, Sara
Martinez-Gutierrez, Marlen
dc.subject.keywords.spa.fl_str_mv dengue virus; Tabernaemontana cymosa; indole alkaloids; molecular docking; antivirals
topic dengue virus; Tabernaemontana cymosa; indole alkaloids; molecular docking; antivirals
description Currently, no specific licensed antiviral exists for treating the illness caused by dengue virus (DENV). Therefore, the search for compounds of natural origin with antiviral activity is an important area of research. In the present study, three compounds were isolated and identified from seeds of Tabernaemontana cymosa plants. The in vitro antiviral effect of those compounds and voacangine against different DENV strains was assessed using different experimental approaches: compounds added before the infection (Pre), at the same time with the virus (Trans), after the infection (Post) or compounds present in all moments of the experiment (Pre-Trans-Post, Combined treatment). In silico studies (docking and molecular dynamics) were also performed to explain the possible antiviral mechanisms. The identified compounds were three structural analogs of voacangine (voacangine-7-hydroxyindolenine, rupicoline and 3-oxo-voacangine). In the Pre-treatment, only voacangine-7-hydroxyindolenine and rupicoline inhibited the infection caused by the DENV-2/NG strain (16.4% and 29.6% infection, respectively). In the Trans-treatment approach, voacangine, voacangine-7-hydroxyindolenine and rupicoline inhibited the infection in both DENV-2/NG (11.2%, 80.4% and 75.7% infection, respectively) and DENV-2/16681 infection models (73.7%, 74.0% and 75.3% infection, respectively). The latter strain was also inhibited by 3-oxo-voacangine (82.8% infection). Moreover, voacangine (most effective virucidal agent) was also effective against one strain of DENV-1 (DENV-1/WestPac/74) and against the third strain of DENV-2 (DENV-2/S16803) (48.5% and 32.4% infection, respectively). Conversely, no inhibition was observed in the post-treatment approach. The last approach (combined) showed that voacangine, voacangine-7-hydroxyindolenine and rupicoline inhibited over 90% of infections (3.5%, 6.9% and 3.5% infection, respectively) of both strains (DENV-2/NG and DENV-2/16681). The free energy of binding obtained with an in silico approach was favorable for the E protein and compounds, which ranged between −5.1 and −6.3 kcal/mol. Finally, the complex formed between DENV-2 E protein and the best virucidal compound was stable for 50 ns. Our results show that the antiviral effect of indole alkaloids derived from T. cymose depends on the serotype and the virus strain.
publishDate 2021
dc.date.issued.none.fl_str_mv 2021-06-23
dc.date.submitted.none.fl_str_mv 2021-05-15
dc.date.accessioned.none.fl_str_mv 2022-12-20T19:22:44Z
dc.date.available.none.fl_str_mv 2022-12-20T19:22:44Z
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dc.identifier.citation.spa.fl_str_mv Monsalve-Escudero, L.M.; Loaiza-Cano, V.; Zapata-Cardona, M.I.; Quintero-Gil, D.C.; Hernández-Mira, E.; Pájaro-González, Y.; Oliveros-Díaz, A.F.; Diaz-Castillo, F.; Quiñones, W.; Robledo, S.; et al. The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain. Plants 2021, 10, 1280. https://doi.org/10.3390/ plants10071280
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12834/1160
dc.identifier.doi.none.fl_str_mv 10.3390/ plants10071280
dc.identifier.instname.spa.fl_str_mv Universidad del Atlántico
dc.identifier.reponame.spa.fl_str_mv Repositorio Universidad del Atlántico
identifier_str_mv Monsalve-Escudero, L.M.; Loaiza-Cano, V.; Zapata-Cardona, M.I.; Quintero-Gil, D.C.; Hernández-Mira, E.; Pájaro-González, Y.; Oliveros-Díaz, A.F.; Diaz-Castillo, F.; Quiñones, W.; Robledo, S.; et al. The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain. Plants 2021, 10, 1280. https://doi.org/10.3390/ plants10071280
10.3390/ plants10071280
Universidad del Atlántico
Repositorio Universidad del Atlántico
url https://hdl.handle.net/20.500.12834/1160
dc.language.iso.spa.fl_str_mv eng
language eng
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eu_rights_str_mv openAccess
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.place.spa.fl_str_mv Barranquilla
dc.publisher.discipline.spa.fl_str_mv Maestría en Gestión Farmacéutica
dc.publisher.sede.spa.fl_str_mv Sede Norte
dc.source.spa.fl_str_mv Plants
institution Universidad del Atlántico
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spelling Monsalve-Escudero, Laura Milenac1300c67-e8a5-4602-be12-bd49a2e13c5fLoaiza-Cano, VanessaZapata-Cardona, Maria IsabelQuintero-Gil, Diana CarolinaHernández-Mira, EstivenPájaro-González, YinaOliveros-Díaz, Andrés FelipeDiaz-Castillo, FredycQuiñones, WistónRobledo, SaraMartinez-Gutierrez, Marlen2022-12-20T19:22:44Z2022-12-20T19:22:44Z2021-06-232021-05-15Monsalve-Escudero, L.M.; Loaiza-Cano, V.; Zapata-Cardona, M.I.; Quintero-Gil, D.C.; Hernández-Mira, E.; Pájaro-González, Y.; Oliveros-Díaz, A.F.; Diaz-Castillo, F.; Quiñones, W.; Robledo, S.; et al. The Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus Strain. Plants 2021, 10, 1280. https://doi.org/10.3390/ plants10071280https://hdl.handle.net/20.500.12834/116010.3390/ plants10071280Universidad del AtlánticoRepositorio Universidad del AtlánticoCurrently, no specific licensed antiviral exists for treating the illness caused by dengue virus (DENV). Therefore, the search for compounds of natural origin with antiviral activity is an important area of research. In the present study, three compounds were isolated and identified from seeds of Tabernaemontana cymosa plants. The in vitro antiviral effect of those compounds and voacangine against different DENV strains was assessed using different experimental approaches: compounds added before the infection (Pre), at the same time with the virus (Trans), after the infection (Post) or compounds present in all moments of the experiment (Pre-Trans-Post, Combined treatment). In silico studies (docking and molecular dynamics) were also performed to explain the possible antiviral mechanisms. The identified compounds were three structural analogs of voacangine (voacangine-7-hydroxyindolenine, rupicoline and 3-oxo-voacangine). In the Pre-treatment, only voacangine-7-hydroxyindolenine and rupicoline inhibited the infection caused by the DENV-2/NG strain (16.4% and 29.6% infection, respectively). In the Trans-treatment approach, voacangine, voacangine-7-hydroxyindolenine and rupicoline inhibited the infection in both DENV-2/NG (11.2%, 80.4% and 75.7% infection, respectively) and DENV-2/16681 infection models (73.7%, 74.0% and 75.3% infection, respectively). The latter strain was also inhibited by 3-oxo-voacangine (82.8% infection). Moreover, voacangine (most effective virucidal agent) was also effective against one strain of DENV-1 (DENV-1/WestPac/74) and against the third strain of DENV-2 (DENV-2/S16803) (48.5% and 32.4% infection, respectively). Conversely, no inhibition was observed in the post-treatment approach. The last approach (combined) showed that voacangine, voacangine-7-hydroxyindolenine and rupicoline inhibited over 90% of infections (3.5%, 6.9% and 3.5% infection, respectively) of both strains (DENV-2/NG and DENV-2/16681). The free energy of binding obtained with an in silico approach was favorable for the E protein and compounds, which ranged between −5.1 and −6.3 kcal/mol. Finally, the complex formed between DENV-2 E protein and the best virucidal compound was stable for 50 ns. Our results show that the antiviral effect of indole alkaloids derived from T. cymose depends on the serotype and the virus strain.application/pdfenghttp://creativecommons.org/licenses/by-nc/4.0/Attribution-NonCommercial 4.0 Internationalinfo:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2PlantsThe Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus StrainThe Antiviral and Virucidal Activities of Voacangine and Structural Analogs Extracted from Tabernaemontana cymosa Depend on the Dengue Virus StrainPúblico generaldengue virus; Tabernaemontana cymosa; indole alkaloids; molecular docking; antiviralsinfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionArtículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_2df8fbb1BarranquillaMaestría en Gestión FarmacéuticaSede NorteTapia-Conyer, R.; Betancourt-Cravioto, M.; Méndez-Galván, J. Dengue: An escalating public health problem in Latin America. Paediatr. Int. Child Health 2012, 32, 14–17. [CrossRef]Gubler, D.J. Aedes aegypti and Aedes aegypti-Borne Disease Control in the 1990s: Top Down or Bottom Up. Am. J. Trop. Med. Hyg. 1989, 40, 571–578. [Google Scholar] [CrossRef] [PubMed]Istúriz, R.E.; Gubler, D.J.; Del Castillo, J.B. Dengue and dengue hemorrhagic fever in Latin America and the Caribbean. Infect. Dis. Clin. 2000, 14, 121–140. [Google Scholar] [CrossRef]Apte-Sengupta, S.; Sirohi, D.; Kuhn, R.J. Coupling of replication and assembly in flaviviruses. Curr. Opin. Virol. 2014, 9, 134–142. [Google Scholar] [CrossRef] [PubMed][Green Version]Chambers, T.J.; Hahn, C.S.; Galler, R.; Rice, C.M. Flavivirus genome organization, expression, and replication. Annu. Rev. Microbiol. 1990, 44, 649–688. [Google Scholar] [CrossRef] [PubMed]Rico-Hesse, R.; Nisalak, A.; Harrison, L.M.; Vaughn, D.W.; Green, S.; Ennis, F.A.; Kalayanarooj, S.; Rothman, A.L. Molecular evolution of dengue type 2 virus in Thailand. Am. J. Trop. Med. Hyg. 1998, 58, 96–101. [Google Scholar] [CrossRef] [PubMed]Leitmeyer, K.C.; Vaughn, D.W.; Watts, D.M.; Salas, R.; Villalobos, I.; Chacon, D.; Ramos, C.; Rico-Hesse, R. Dengue Virus Structural Differences That Correlate with Pathogenesis. J. Virol. 1999, 73, 4738–4747. [Google Scholar] [CrossRef] [PubMed][Green Version]Martínez-Betancur, V.; Marín-Villa, M.; Martínez-Gutierrez, M. Infection of epithelial cells with dengue virus promotes the expression of proteins favoring the replication of certain viral strains. J. Med. Virol. 2014, 86, 1448–1458. [Google Scholar] [CrossRef]Martínez-Betancur, V.; Martinez-Gutierrez, M. Proteomic profile of human monocytic cells infected with dengue virus. Asian Pac. J. Trop. Biomed. 2016, 6, 914–923. [Google Scholar] [CrossRef]Cruz-Oliveira, C.; Freire, J.M.; Conceição, T.M.; Higa, L.M.; Castanho, M.A.; Da Poian, A.T. Receptors and routes of dengue virus entry into the host cells. FEMS Microbiol. Rev. 2015, 39, 155–170. [Google Scholar] [CrossRef][Green Version]Mosso, C.; Galván-Mendoza, I.J.; Ludert, J.E.; del Angel, R.M. Endocytic pathway followed by dengue virus to infect the mosquito cell line C6/36 HT. Virology 2008, 378, 193–199. [Google Scholar] [CrossRef] [PubMed][Green Version]Elshuber, S.; Allison, S.L.; Heinz, F.X.; Mandl, C.W. Cleavage of protein prM is necessary for infection of BHK-21 cells by tick-borne encephalitis virusFN1. J. Gen. Virol. 2003, 84, 183–191. [Google Scholar] [CrossRef] [PubMed]Magden, J.; Kääriäinen, L.; Ahola, T. Inhibitors of virus replication: Recent developments and prospects. Appl. Microbiol. Biotechnol. 2005, 66, 612–621. [Google Scholar] [CrossRef] [PubMed]Denaro, M.; Smeriglio, A.; Barreca, D.; De Francesco, C.; Occhiuto, C.; Milano, G.; Trombetta, D. Antiviral activity of plants and their isolated bioactive compounds: An update. Phytother. Res. 2020, 34, 742–768. [Google Scholar] [CrossRef] [PubMed]Cortez-Gallardo, V.; Macedo-Ceja, J.P.; Hernández-Arroyo, M.; Arteaga-Aureoles, G.; Espinosa-Galván, D.; Rodríguez-Landa, J.F. Farmacognosia: Breve historia de sus orígenes y su relación con las ciencias médicas. Rev. Bioméd. 2004, 15, 123–136. [Google Scholar] [CrossRef][Green Version]Hernández-Castro, C.; Diaz-Castillo, F.; Martinez-Gutierrez, M. Ethanol extracts of Cassia grandis and Tabernaemontana cymosa inhibit the in vitro replication of dengue virus serotype 2. Asian Pac. J. Trop. Dis. 2015, 5, 98–106. [Google Scholar] [CrossRef]Gómez-Calderón, C.; Mesa-Castro, C.; Robledo, S.; Gómez, S.; Bolivar-Avila, S.; Diaz-Castillo, F.; Martínez-Gutierrez, M. Antiviral effect of compounds derived from the seeds of Mammea americana and Tabernaemontana cymosa on Dengue and Chikungunya virus infections. BMC Complement. Altern. Med. 2017, 17, 1–12. [Google Scholar] [CrossRef][Green Version]Trujillo-Correa, A.I.; Quintero-Gil, D.C.; Diaz-Castillo, F.; Quiñones, W.; Robledo, S.M.; Martinez-Gutierrez, M. In vitro and in silico anti-dengue activity of compounds obtained from Psidium guajava through bioprospecting. BMC Complement. Altern. Med. 2019, 19, 1–16. [Google Scholar] [CrossRef]Endress, M.E.; Liede-Schumann, S.; Meve, U. An updated classification for Apocynaceae. Phytotaxa 2014, 159, 175–194. [Google Scholar] [CrossRef]Dey, A.; Mukherjee, A.; Chaudhury, M. Alkaloids from apocynaceae: Origin, pharmacotherapeutic properties, and structure-activity studies. In Studies in Natural Products Chemistry; Elsevier: Amsterdam, The Netherlands, 2017; Volume 52, pp. 373–488. [Google Scholar]Anbukkarasi, M.; Thomas, P.A.; Sheu, J.-R.; Geraldine, P. In vitro antioxidant and anticataractogenic potential of silver nanoparticles biosynthesized using an ethanolic extract of Tabernaemontana divaricata leaves. Biomed. Pharmacother. 2017, 91, 467–475. [Google Scholar] [CrossRef]Thambi, P.T.; Kuzhivelil, B.; Sabu, M.; Jolly, C. Antioxidant and antiinflammatory activities of the flowers of Tabernaemontana coronaria (L) R.BR. Indian J. Pharm. Sci. 2006, 68, 352–355. [Google Scholar]De Almeida, L.; Cintra, A.C.; Veronese, E.L.; Nomizo, A.; Franco, J.J.; Arantes, E.C.; Giglio, J.R.; Sampaio, S.V. Anticrotalic and antitumoral activities of gel filtration fractions of aqueous extract from Tabernaemontana catharinensis (Apocynaceae). Comp. Biochem. Physiol. Part C Toxicol. Pharm. 2004, 137, 19–27. [Google Scholar] [CrossRef]Van Beek, T.; Kuijlaars, F.; Thomassen, P.; Verpoorte, R.; Svendsen, A.B. Antimicrobially active alkaloids from Tabernaemontana pachysiphon. Phytochemistry 1984, 23, 1771–1778. [Google Scholar] [CrossRef]Díaz Castillo, F.; Morelos Cardona, S.M.; Carrascal Medina, M.; Pájaro González, Y.; Gómez Estrada, H. Actividad larvicida de extractos etanólicos de Tabernaemontana cymosa y Trichilia hirta sobre larvas de estadio III y IV de Aedes aegypti (Diptera: Culicidae). Rev. Cuba. Plantas Med. 2012, 17, 256–267. [Google Scholar]Pereira, P.S.; França, S.D.C.; De Oliveira, P.V.A.; Breves, C.M.D.S.; Pereira, S.I.V.; Sampaio, S.V.; Nomizo, A.; Dias, D.A. Chemical constituents from Tabernaemontana catharinensis root bark: A brief NMR review of indole alkaloids and in vitro cytotoxicity. Quím. Nova 2008, 31, 20–24. [Google Scholar] [CrossRef][Green Version]Sharma, P.; Cordell, G.A. Heyneanine Hydroxyindolenine, A New Indole Alkaloid from Ervatamia coronaria var. plena. J. Nat. Prod. 1988, 51, 528–531. [Google Scholar] [CrossRef]Husain, K.; Said, I.M.; Din, L.B.; Takayama, H.; Kitajima, M.; Aimi, N. Alkaloids from The Roots of Tabernaemontana Macrocarpa Jack. Nat. Prod. Sci. 1997, 3, 42–48. [Google Scholar]Achenbach, H.; Benirschke, M.; Torrenegra, R. Alkaloids and other compounds from seeds of Tabernaemontana cymosa. Phytochemistry 1997, 45, 325–335. [Google Scholar] [CrossRef]Farrow, S.C.; Kamileen, M.O.; Meades, J.; Ameyaw, B.; Xiao, Y.; O’Connor, S.E. Cytochrome P450 and O-methyltransferase catalyze the final steps in the biosynthesis of the anti-addictive alkaloid ibogaine from Tabernanthe iboga. J. Biol. Chem. 2018, 293, 13821–13833. [Google Scholar] [CrossRef] [PubMed][Green Version]Krengel, F.; Herrera Santoyo, J.; Olivera Flores, T.D.J.; Chávez Ávila, V.M.; Pérez Flores, F.J.; Reyes Chilpa, R. Quantification of anti-addictive alkaloids ibogaine and voacangine in in vivo-and in vitro-grown plants of two Mexican Tabernaemontana species. Chem. Biodivers. 2016, 13, 1730–1737. [Google Scholar] [CrossRef] [PubMed]Bardiot, D.; Koukni, M.; Smets, W.; Carlens, G.; McNaughton, M.; Kaptein, S.; Dallmeier, K.; Chaltin, P.; Neyts, J.; Marchand, A. Discovery of Indole Derivatives as Novel and Potent Dengue Virus Inhibitors. J. Med. Chem. 2018, 61, 8390–8401. [Google Scholar] [CrossRef] [PubMed]Laura, G.F.M.; Njoya, E.M.; Jouda, J.-B.; Kweka, B.N.W.; Mbazoa, C.D.; Wang, F.; Seguin, E.; Wandji, J. A new cytotoxic indole alkaloid from Tabernaemontana inconspicua stapf. Nat. Prod. Res. 2021, 35, 1590–1595. [Google Scholar] [CrossRef] [PubMed]Sundar, L.; Chang, F.N. Antimicrobial activity and biosynthesis of indole antibiotics produced by Xenorhabdus nematophilus. Microbiology 1993, 139, 3139–3148. [Google Scholar] [CrossRef][Green Version]O’Brien, S.; Schiller, G.; Lister, J.; Damon, L.; Goldberg, S.; Aulitzky, W.; Ben-Yehuda, D.; Stock, W.; Coutre, S.; Douer, D.; et al. High-Dose Vincristine Sulfate Liposome Injection for Advanced, Relapsed, and Refractory Adult Philadelphia Chromosome–Negative Acute Lymphoblastic Leukemia. J. Clin. Oncol. 2013, 31, 676–683. [Google Scholar] [CrossRef][Green Version]Diwaker, D.; Mishra, K.P.; Ganju, L.; Singh, S.B. Protein Disulfide Isomerase Mediates Dengue Virus Entry in Association with Lipid Rafts. Viral Immunol. 2015, 28, 153–160. [Google Scholar] [CrossRef] [PubMed]Limjindaporn, T.; Wongwiwat, W.; Noisakran, S.; Srisawat, C.; Netsawang, J.; Puttikhunt, C.; Kasinrerk, W.; Avirutnan, P.; Thiemmeca, S.; Sriburi, R.; et al. Interaction of dengue virus envelope protein with endoplasmic reticulum-resident chaperones facilitates dengue virus production. Biochem. Biophys. Res. Commun. 2009, 379, 196–200. [Google Scholar] [CrossRef]Choy, M.M.; Zhang, S.L.; Costa, V.V.; Tan, H.C.; Horrevorts, S.; Ooi, E.E. Proteasome Inhibition Suppresses Dengue Virus Egress in Antibody Dependent Infection. PLoS Negl. Trop. Dis. 2015, 9, e0004058. [Google Scholar] [CrossRef] [PubMed][Green Version]Teissier, E.; Zandomeneghi, G.; Loquet, A.; Lavillette, D.; Lavergne, J.-P.; Montserret, R.; Cosset, F.-L.; Böckmann, A.; Meier, B.H.; Penin, F.; et al. Mechanism of Inhibition of Enveloped Virus Membrane Fusion by the Antiviral Drug Arbidol. PLoS ONE 2011, 6, e15874. [Google Scholar] [CrossRef] [PubMed][Green Version]Germi, R.; Crance, J.-M.; Garin, D.; Guimet, J.; Lortat-Jacob, H.; Ruigrok, R.W.; Zarski, J.-P.; Drouet, E. Heparan Sulfate-Mediated Binding of Infectious Dengue Virus Type 2 and Yellow Fever Virus. Virology 2002, 292, 162–168. [Google Scholar] [CrossRef]Nelson, J.; McFerran, N.V.; Pivato, G.; Chambers, E.; Doherty, C.; Steele, D.; Timson, D.J. The 67 kDa laminin receptor: Structure, function and role in disease. Biosci. Rep. 2008, 28, 33–48. [Google Scholar] [CrossRef][Green Version]Tassaneetrithep, B.; Burgess, T.H.; Granelli-Piperno, A.; Trumpfheller, C.; Finke, J.; Sun, W.; Eller, M.A.; Pattanapanyasat, K.; Sarasombath, S.; Birx, D.L.; et al. DC-SIGN (CD209) Mediates Dengue Virus Infection of Human Dendritic Cells. J. Exp. Med. 2003, 197, 823–829. [Google Scholar] [CrossRef][Green Version]Talarico, L.B.; Pujol, C.A.; Zibetti, R.G.M.; Faría, P.C.S.; Noseda, M.D.; Duarte, M.E.R.; Damonte, E.B. The antiviral activity of sulfated polysaccharides against dengue virus is dependent on virus serotype and host cell. Antivir. Res. 2005, 66, 103–110. [Google Scholar] [CrossRef]Goo, L.; VanBlargan, L.A.; Dowd, K.A.; Diamond, M.S.; Pierson, T.C. A single mutation in the envelope protein modulates flavivirus antigenicity, stability, and pathogenesis. PLoS Pathog. 2017, 13, e1006178. [Google Scholar] [CrossRef][Green Version]Hishiki, T.; Kato, F.; Tajima, S.; Toume, K.; Umezaki, M.; Takasaki, T.; Miura, T. Hirsutine, an Indole Alkaloid of Uncaria rhynchophylla, Inhibits Late Step in Dengue Virus Lifecycle. Front. Microbiol. 2017, 8, 1674. [Google Scholar] [CrossRef] [PubMed]Hitakarun, A.; Khongwichit, S.; Wikan, N.; Roytrakul, S.; Yoksan, S.; Rajakam, S.; Davidson, A.D.; Smith, D.R. Evaluation of the antiviral activity of orlistat (tetrahydrolipstatin) against dengue virus, Japanese encephalitis virus, Zika virus and chikungunya virus. Sci. Rep. 2020, 10, 1499. [Google Scholar] [CrossRef] [PubMed][Green Version]Loaiza-Cano, V.; Monsalve-Escudero, L.M.; Quintero-Gil, C.; Pastrana, M.; Andres, P.M.S.; Galeano, E.; Wildeman, Z.; Martinez-Gutierrez, M. In Vitro and In Silico Anti-Arboviral Activities of Dihalogenated Phenolic Derivates of L-Tyrosine. Molecules 2021, 26, 3430. [Google Scholar] [CrossRef]Terstappen, G.C.; Reggiani, A. In silico research in drug discovery. Trends Pharm. Sci. 2001, 22, 23–26. [Google Scholar] [CrossRef]Velásquez, M.; Drosos, J.; Gueto, C.; Márquez, J.; Vivas-Reyes, R. Autodock-PM6 method to choose the better pose in molecular docking studies. Rev. Colomb. Quím. 2013, 42, 101–124. [Google Scholar]Murgueitio, M.S.; Bermudez, M.; Mortier, J.; Wolber, G. In silico virtual screening approaches for anti-viral drug discovery. Drug Discov. Today Technol. 2012, 9, e219–e225. [Google Scholar] [CrossRef]Ekins, S.; Mestres, J.; Testa, B. In silico pharmacology for drug discovery: Applications to targets and beyond. Br. J. Pharm. 2007, 152, 21–37. [Google Scholar] [CrossRef][Green Version]Scheiner, S.; Kar, T.; Pattanayak, J. Comparison of Various Types of Hydrogen Bonds Involving Aromatic Amino Acids. J. Am. Chem. Soc. 2002, 124, 13257–13264. [Google Scholar] [CrossRef]Quintero-Gil, C.; Parra-Suescún, J.; Lopez-Herrera, A.; Orduz, S. In-silico design and molecular docking evaluation of peptides derivatives from bacteriocins and porcine beta defensin-2 as inhibitors of Hepatitis E virus capsid protein. Virusdisease 2017, 28, 281–288. [Google Scholar] [CrossRef] [PubMed]Domingo, C.; Niedrig, M.; Teichmann, A.; Kaiser, M.; Rumer, L.; Jarman, R.G.; Donoso-Mantke, O. 2nd International External Quality Control Assessment for the Molecular Diagnosis of Dengue Infections. PLoS Negl. Trop. Dis. 2010, 4, e833. [Google Scholar] [CrossRef][Green Version]Cockburn, J.; Sanchez, M.E.N.; Fretes, N.; Urvoas, A.; Staropoli, I.; Kikuti, C.M.; Coffey, L.L.; Seisdedos, F.A.; Bedouelle, H.; Rey, F.A. Mechanism of Dengue Virus Broad Cross-Neutralization by a Monoclonal Antibody. Structure 2012, 20, 303–314. [Google Scholar] [CrossRef] [PubMed][Green Version]Trott, O.; Olson, A.J. AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J. Comput. Chem. 2010, 31, 455–461. [Google Scholar] [CrossRef] [PubMed][Green Version]Lavi, A.; Ngan, C.H.; Movshovitz-Attias, D.; Bohnuud, T.; Yueh, C.; Beglov, D.; Schueler-Furman, O.; Kozakov, D. Detection of peptide-binding sites on protein surfaces: The first step toward the modeling and targeting of peptide-mediated interactions. Proteins Struct. Funct. Bioinform. 2013, 81, 2096–2105. [Google Scholar] [CrossRef] [PubMed][Green Version]Berendsen, H.; Van Der Spoel, D.; Van Drunen, R. GROMACS: A message-passing parallel molecular dynamics implementation. Comput. Phys. Commun. 1995, 91, 43–56. [Google Scholar] [CrossRef]Lemkul, J. From Proteins to Perturbed Hamiltonians: A Suite of Tutorials for the GROMACS-2018 Molecular Simulation Package [Article v1.0]. Living J. Comput. Mol. Sci. 2019, 1, 5068. [Google Scholar] [CrossRef]MacKerell, A.D., Jr.; Brooks, B.; Brooks, C.L., III; Nilsson, L.; Roux, B.; Won, Y.; Karplus, M. CHARMM: The energy function and its parameterization. Encycl. Comput. Chem. 2002, 1, 271. [Google Scholar]Vanommeslaeghe, K.; Hatcher, E.; Acharya, C.; Kundu, S.; Zhong, S.; Shim, J.; Darian, E.; Guvench, O.; Lopes, P.; Vorobyov, I.; et al. CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields. J. Comput. Chem. 2009, 31, 671–690. [Google Scholar] [CrossRef][Green Version]Selvaraj, C.; Dinesh, D.C.; Panwar, U.; Abhirami, R.; Boura, E.; Singh, S.K. Structure-based virtual screening and molecular dynamics simulation of SARS-CoV-2 Guanine-N7 methyltransferase (nsp14) for identifying antiviral inhibitors against COVID-19. J. Biomol. Struct. Dyn. 2020, 38, 1–12. [Google Scholar] [CrossRef] [PubMed]Sinha, S.; Wang, S.M. Classification of VUS and unclassified variants in BRCA1 BRCT repeats by molecular dynamics simulation. Comput. Struct. Biotechnol. J. 2020, 18, 723–736. [Google Scholar] [CrossRef] [PubMed]Kaushik, A.C.; Sahi, S. Molecular modeling and molecular dynamics simulation-based structural analysis of GPR3. Netw. Model. Anal. Health Inform. Bioinform. 2017, 6, 9. 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