Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes

Freshwater stingrays from the family Potamotrygonidae have a restricted distribution to the freshwater systems of South America. Lack of adequate information about the taxonomic and evolutionary relationships, ecology, biology and distribution of several species belonging to this family makes them v...

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Autores:
García Villamil, David Alejandro
Tipo de recurso:
Fecha de publicación:
2012
Institución:
Universidad de los Andes
Repositorio:
Séneca: repositorio Uniandes
Idioma:
eng
OAI Identifier:
oai:repositorio.uniandes.edu.co:1992/11944
Acceso en línea:
http://hdl.handle.net/1992/11944
Palabra clave:
Potamotrygon - Investigaciones - Colombia
Potamotrygon - Investigaciones - Venezuela
Rayas (Peces) - Investigaciones - Colombia
Rayas (Peces) - Investigaciones - Venezuela
Biología
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-sa/4.0/
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dc.title.es_CO.fl_str_mv Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
title Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
spellingShingle Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
Potamotrygon - Investigaciones - Colombia
Potamotrygon - Investigaciones - Venezuela
Rayas (Peces) - Investigaciones - Colombia
Rayas (Peces) - Investigaciones - Venezuela
Biología
title_short Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
title_full Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
title_fullStr Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
title_full_unstemmed Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
title_sort Molecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genes
dc.creator.fl_str_mv García Villamil, David Alejandro
dc.contributor.advisor.none.fl_str_mv Caballero Gaitán, Susana Josefina
dc.contributor.author.none.fl_str_mv García Villamil, David Alejandro
dc.subject.keyword.es_CO.fl_str_mv Potamotrygon - Investigaciones - Colombia
Potamotrygon - Investigaciones - Venezuela
Rayas (Peces) - Investigaciones - Colombia
Rayas (Peces) - Investigaciones - Venezuela
topic Potamotrygon - Investigaciones - Colombia
Potamotrygon - Investigaciones - Venezuela
Rayas (Peces) - Investigaciones - Colombia
Rayas (Peces) - Investigaciones - Venezuela
Biología
dc.subject.themes.none.fl_str_mv Biología
description Freshwater stingrays from the family Potamotrygonidae have a restricted distribution to the freshwater systems of South America. Lack of adequate information about the taxonomic and evolutionary relationships, ecology, biology and distribution of several species belonging to this family makes them vulnerable to anthropic activities, including commercial exploitation for the ornamental fish market. Samples were collected from the main river basins in Colombia and Venezuela (Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo) for four genera and seven species of the family (Heliotrygon gomesi, Paratrygon aiereba, Plesiotrygon iwamae, Potamotrygon motoro, Potamotrygon yepezi, Potamotrygon schroederi, Potamotrygon magdalenae), and some unidentified species. Molecular markers Cytochrome Oxidase subunit I, Cytochrome b and ATPase subunit 6 were amplified and sequenced. Maximum likelihood and Bayesian Inference analysis were performed to obtain topologies for each marker and for a concatenated dataset including the three genes. Small dataset may compromise some methods estimations of sequence divergence in the ATP6 marker. Monophyly of the four genera in the Potamotrygonidae family was confirmed and phylogenetic relations among member of the Potamotrygon genus were not clearly resolved. However, results obtained with the molecular marker Cytb appear to offer a good starting point to differentiate among genera and species as a tool that could be used for fast molecular identification (Barcode). The application of this gene as a barcode could provide a useful tool than can be applied for Management and regulation of extraction practices for these genera. Sequencing of complete mitochondrial genomes would be the next step for testing evolutionary hypothesis among these genera. Population studies should be undertaken for Potamotrygon magdalenae, Paratrygon aiereba and Potamotrygon motoro to establish possible population differentiation among basins, information that is key for delineating conservation and management plans for these species.
publishDate 2012
dc.date.issued.none.fl_str_mv 2012
dc.date.accessioned.none.fl_str_mv 2018-09-28T08:23:12Z
dc.date.available.none.fl_str_mv 2018-09-28T08:23:12Z
dc.type.spa.fl_str_mv Trabajo de grado - Maestría
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dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/1992/11944
dc.identifier.pdf.none.fl_str_mv u628153.pdf
dc.identifier.instname.spa.fl_str_mv instname:Universidad de los Andes
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dc.format.extent.es_CO.fl_str_mv 36 hojas
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dc.publisher.program.es_CO.fl_str_mv Maestría en Ciencias Biológicas
dc.publisher.faculty.es_CO.fl_str_mv Facultad de Ciencias
dc.publisher.department.spa.fl_str_mv Departamento de Ciencias Biológicas
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spelling Al consultar y hacer uso de este recurso, está aceptando las condiciones de uso establecidas por los autores.http://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Caballero Gaitán, Susana Josefinavirtual::17740-1García Villamil, David Alejandrof8b7ba02-ad02-40d2-8abb-e9d0374733876002018-09-28T08:23:12Z2018-09-28T08:23:12Z2012http://hdl.handle.net/1992/11944u628153.pdfinstname:Universidad de los Andesreponame:Repositorio Institucional Sénecarepourl:https://repositorio.uniandes.edu.co/Freshwater stingrays from the family Potamotrygonidae have a restricted distribution to the freshwater systems of South America. Lack of adequate information about the taxonomic and evolutionary relationships, ecology, biology and distribution of several species belonging to this family makes them vulnerable to anthropic activities, including commercial exploitation for the ornamental fish market. Samples were collected from the main river basins in Colombia and Venezuela (Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo) for four genera and seven species of the family (Heliotrygon gomesi, Paratrygon aiereba, Plesiotrygon iwamae, Potamotrygon motoro, Potamotrygon yepezi, Potamotrygon schroederi, Potamotrygon magdalenae), and some unidentified species. Molecular markers Cytochrome Oxidase subunit I, Cytochrome b and ATPase subunit 6 were amplified and sequenced. Maximum likelihood and Bayesian Inference analysis were performed to obtain topologies for each marker and for a concatenated dataset including the three genes. Small dataset may compromise some methods estimations of sequence divergence in the ATP6 marker. Monophyly of the four genera in the Potamotrygonidae family was confirmed and phylogenetic relations among member of the Potamotrygon genus were not clearly resolved. However, results obtained with the molecular marker Cytb appear to offer a good starting point to differentiate among genera and species as a tool that could be used for fast molecular identification (Barcode). The application of this gene as a barcode could provide a useful tool than can be applied for Management and regulation of extraction practices for these genera. Sequencing of complete mitochondrial genomes would be the next step for testing evolutionary hypothesis among these genera. Population studies should be undertaken for Potamotrygon magdalenae, Paratrygon aiereba and Potamotrygon motoro to establish possible population differentiation among basins, information that is key for delineating conservation and management plans for these species.Magíster en Ciencias BiológicasMaestría36 hojasapplication/pdfenginstname:Universidad de los Andesreponame:Repositorio Institucional SénecaMolecular systematics of the freshwater stingrays (Myliobatiformes: potamotrygonidae) of the Amazon, Orinoco, Magdalena, Esequibo, Caribe and Maracaibo basins (Colombia-Venezuela): Evidence from mitochondrial genesTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesishttp://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/TMMaestría en Ciencias BiológicasFacultad de CienciasDepartamento de Ciencias BiológicasPotamotrygon - Investigaciones - ColombiaPotamotrygon - Investigaciones - VenezuelaRayas (Peces) - Investigaciones - ColombiaRayas (Peces) - Investigaciones - VenezuelaBiologíaPublication0000-0002-9285-3873virtual::17740-1https://scienti.minciencias.gov.co/cvlac/visualizador/generarCurriculoCv.do?cod_rh=0000686603virtual::17740-11735065d-7c92-4011-b244-8e579ec9f57cvirtual::17740-11735065d-7c92-4011-b244-8e579ec9f57cvirtual::17740-1ORIGINALu628153.pdfapplication/pdf1063672https://repositorio.uniandes.edu.co/bitstreams/0f6a863d-99aa-4ebe-8626-3c98bf87bd48/download1b8ee176ca10eef7b14a8e267eb8124aMD51THUMBNAILu628153.pdf.jpgu628153.pdf.jpgIM Thumbnailimage/jpeg21461https://repositorio.uniandes.edu.co/bitstreams/b1900917-1b85-44cb-9cf5-e5a94cf08a8b/downloada8b2b25035b6867bfad1661638822fe1MD55TEXTu628153.pdf.txtu628153.pdf.txtExtracted texttext/plain64089https://repositorio.uniandes.edu.co/bitstreams/7b82c193-68ec-47cd-afe6-d137bb241569/download06bb7d8b3648762be4650bff4e9946dfMD541992/11944oai:repositorio.uniandes.edu.co:1992/119442024-11-14 14:28:02.229http://creativecommons.org/licenses/by-nc-sa/4.0/open.accesshttps://repositorio.uniandes.edu.coRepositorio institucional Sénecaadminrepositorio@uniandes.edu.co