Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid

BACKGROUND Currently, the criteria for selection of gene targets in strains oriented to fermentation-based bioprocesses development have been largely based on the bioproduct yield, concentration or productivity. Nevertheless the concentration and purification of the product of interest strongly infl...

Full description

Autores:
Tafur Rangel, Albert Enrique
Camelo Valera, Laura Carolina
Gómez Ramírez, Jorge Mario
Tipo de recurso:
Fecha de publicación:
2017
Institución:
Universidad de los Andes
Repositorio:
Séneca: repositorio Uniandes
Idioma:
eng
OAI Identifier:
oai:repositorio.uniandes.edu.co:1992/35053
Acceso en línea:
http://hdl.handle.net/1992/35053
Palabra clave:
Ingeniería metabólica - Investigaciones
Acido succínico - Productividad - Investigaciones
Escherichia coli - Investigaciones
Biología
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-sa/4.0/
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dc.title.es_CO.fl_str_mv Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
title Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
spellingShingle Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
Ingeniería metabólica - Investigaciones
Acido succínico - Productividad - Investigaciones
Escherichia coli - Investigaciones
Biología
title_short Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
title_full Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
title_fullStr Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
title_full_unstemmed Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
title_sort Effects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acid
dc.creator.fl_str_mv Tafur Rangel, Albert Enrique
Camelo Valera, Laura Carolina
Gómez Ramírez, Jorge Mario
dc.contributor.advisor.none.fl_str_mv González Barrios, Andrés Fernando
dc.contributor.author.none.fl_str_mv Tafur Rangel, Albert Enrique
Camelo Valera, Laura Carolina
Gómez Ramírez, Jorge Mario
dc.subject.keyword.es_CO.fl_str_mv Ingeniería metabólica - Investigaciones
Acido succínico - Productividad - Investigaciones
Escherichia coli - Investigaciones
topic Ingeniería metabólica - Investigaciones
Acido succínico - Productividad - Investigaciones
Escherichia coli - Investigaciones
Biología
dc.subject.themes.none.fl_str_mv Biología
description BACKGROUND Currently, the criteria for selection of gene targets in strains oriented to fermentation-based bioprocesses development have been largely based on the bioproduct yield, concentration or productivity. Nevertheless the concentration and purification of the product of interest strongly influences the final production cost. Then, a metabolic engineering-downstream coupling evaluation would be central when selecting the metabolic pathways candidates in the strain. Here, we evaluated the effects of the metabolic engineering an Escherichia coli strain in a succinic acid (SA) fermentation process using glycerol on the downstream process in terms of operational cost and energy consumption. RESULTS Three strain scenarios were selected using a bi-level linear optimization problem solved by MILP, and simulated in a transient fashion with dynamic flow balance analysis considering both biomass and SA productivity. Our results show that the succinic acid productivity constitutes a central parameter when selecting the appropriate gene targets for deletion nonetheless the presence of organic acids in the downstream...
publishDate 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2020-06-10T09:32:48Z
dc.date.available.none.fl_str_mv 2020-06-10T09:32:48Z
dc.type.spa.fl_str_mv Trabajo de grado - Maestría
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dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/1992/35053
dc.identifier.pdf.none.fl_str_mv u806791.pdf
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identifier_str_mv u806791.pdf
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dc.language.iso.es_CO.fl_str_mv eng
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dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-sa/4.0/
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dc.format.extent.es_CO.fl_str_mv 24 hojas
dc.format.mimetype.es_CO.fl_str_mv application/pdf
dc.publisher.es_CO.fl_str_mv Uniandes
dc.publisher.program.es_CO.fl_str_mv Maestría en Biología Computacional
dc.publisher.faculty.es_CO.fl_str_mv Facultad de Ciencias
dc.publisher.department.es_CO.fl_str_mv Departamento de Biología
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spelling Al consultar y hacer uso de este recurso, está aceptando las condiciones de uso establecidas por los autores.http://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2González Barrios, Andrés Fernandocc132031-adde-4342-ba8c-b406b8175e2b400Tafur Rangel, Albert Enrique29556500Camelo Valera, Laura Carolina8882bdfc-d7ea-498b-bc69-125f8fda5249500Gómez Ramírez, Jorge Mario85075002020-06-10T09:32:48Z2020-06-10T09:32:48Z2017http://hdl.handle.net/1992/35053u806791.pdfinstname:Universidad de los Andesreponame:Repositorio Institucional Sénecarepourl:https://repositorio.uniandes.edu.co/BACKGROUND Currently, the criteria for selection of gene targets in strains oriented to fermentation-based bioprocesses development have been largely based on the bioproduct yield, concentration or productivity. Nevertheless the concentration and purification of the product of interest strongly influences the final production cost. Then, a metabolic engineering-downstream coupling evaluation would be central when selecting the metabolic pathways candidates in the strain. Here, we evaluated the effects of the metabolic engineering an Escherichia coli strain in a succinic acid (SA) fermentation process using glycerol on the downstream process in terms of operational cost and energy consumption. RESULTS Three strain scenarios were selected using a bi-level linear optimization problem solved by MILP, and simulated in a transient fashion with dynamic flow balance analysis considering both biomass and SA productivity. Our results show that the succinic acid productivity constitutes a central parameter when selecting the appropriate gene targets for deletion nonetheless the presence of organic acids in the downstream..."INTRODUCCION Actualmente, los criterios para la selección de blancos en ingeniería metabólica orientadas al desarrollo de bioprocesos basados en la fermentación se han basado en gran medida en el rendimiento, la concentración o la productividad del bioproducto. Sin embargo, la concentración y la purificación del producto de interés influye fuertemente en el costo de producción final. En este sentido, una evaluación acoplada de la ingeniería metabólica y el proceso de recuperación y purificación sería central para seleccionar las vías metabólicas candidatas en la cepa. En este estudio, evaluamos los efectos de la ingeniería metabólica de una cepa de Escherichia coli para obtener ácido succínico (SA) usando glicerol como fuente de carbono en el proceso de recuperación y purificación en términos de costo operacional y consumo de energía. RESULTADOS Se seleccionaron tres escenarios de ingeniera metabólica utilizando un problema de optimización lineal, resuelto por MILP. Luego se simularon de manera transitoria con un análisis de balance de flujo dinámico..."--Tomado del Formato de Documento de Grado.Magíster en Biología ComputacionalMaestría24 hojasapplication/pdfengUniandesMaestría en Biología ComputacionalFacultad de CienciasDepartamento de Biologíainstname:Universidad de los Andesreponame:Repositorio Institucional SénecaEffects of metabolic engineering on downstream processing operational cost and energy consumption : the case of Escherichia coli's glycerol conversion to succinic acidTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesishttp://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/TMIngeniería metabólica - InvestigacionesAcido succínico - Productividad - InvestigacionesEscherichia coli - InvestigacionesBiologíaPublicationTHUMBNAILu806791.pdf.jpgu806791.pdf.jpgIM Thumbnailimage/jpeg18952https://repositorio.uniandes.edu.co/bitstreams/d9685486-50bb-4adb-8c2f-73219af0b929/download8ba97376cb3c36e1923cc51390a3c5c8MD55ORIGINALu806791.pdfapplication/pdf1079945https://repositorio.uniandes.edu.co/bitstreams/53cca98c-b8d9-4b3a-873c-a8a7a304f3b5/download74161d43f692332771bf033ea9bd3950MD51TEXTu806791.pdf.txtu806791.pdf.txtExtracted texttext/plain49850https://repositorio.uniandes.edu.co/bitstreams/f78a3d50-d3dd-4580-bb1a-35582adde48a/download4235dbdaa3be2b18269394ee11218a68MD541992/35053oai:repositorio.uniandes.edu.co:1992/350532023-10-10 17:40:09.592http://creativecommons.org/licenses/by-nc-sa/4.0/open.accesshttps://repositorio.uniandes.edu.coRepositorio institucional Sénecaadminrepositorio@uniandes.edu.co