Anaerobiosis: a new gamer in phage-host interaction

En esta tesis doctoral se usaron técnicas y metodologías de microbiología tradicional, moleculares y secuenciación de última generación para análisis de células, proteínas, ADN y ARN.

Autores:: Hernández Villamizar, Santiago

Tipo de recurso:: Doctoral thesis

Fecha de publicación:: 2023

Institución:: Universidad de los Andes

Repositorio:: Séneca: repositorio Uniandes

Idioma:: eng

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oai_identifier_str	oai:repositorio.uniandes.edu.co:1992/64595
network_acronym_str	UNIANDES2
network_name_str	Séneca: repositorio Uniandes
repository_id_str
dc.title.none.fl_str_mv	Anaerobiosis: a new gamer in phage-host interaction
title	Anaerobiosis: a new gamer in phage-host interaction
spellingShingle	Anaerobiosis: a new gamer in phage-host interaction Bacteriófagos Salmonella Anaerobiosis Transcriptómica Biología
title_short	Anaerobiosis: a new gamer in phage-host interaction
title_full	Anaerobiosis: a new gamer in phage-host interaction
title_fullStr	Anaerobiosis: a new gamer in phage-host interaction
title_full_unstemmed	Anaerobiosis: a new gamer in phage-host interaction
title_sort	Anaerobiosis: a new gamer in phage-host interaction
dc.creator.fl_str_mv	Hernández Villamizar, Santiago
dc.contributor.advisor.none.fl_str_mv	Vives Flórez, Martha Josefina
dc.contributor.author.none.fl_str_mv	Hernández Villamizar, Santiago
dc.contributor.jury.none.fl_str_mv	Celis Ramírez, Adriana Marcela Rodríguez Villamizar, Fernando
dc.contributor.researchgroup.es_CO.fl_str_mv	Centro de Investigaciones Microbiológicas - CIMIC
dc.subject.keyword.none.fl_str_mv	Bacteriófagos Salmonella Anaerobiosis Transcriptómica
topic	Bacteriófagos Salmonella Anaerobiosis Transcriptómica Biología
dc.subject.themes.es_CO.fl_str_mv	Biología
description	En esta tesis doctoral se usaron técnicas y metodologías de microbiología tradicional, moleculares y secuenciación de última generación para análisis de células, proteínas, ADN y ARN.
publishDate	2023
dc.date.accessioned.none.fl_str_mv	2023-02-03T15:24:46Z
dc.date.available.none.fl_str_mv	2023-02-03T15:24:46Z
dc.date.issued.none.fl_str_mv	2023-02-02
dc.type.es_CO.fl_str_mv	Trabajo de grado - Doctorado
dc.type.driver.none.fl_str_mv	info:eu-repo/semantics/doctoralThesis
dc.type.version.none.fl_str_mv	info:eu-repo/semantics/acceptedVersion
dc.type.coar.none.fl_str_mv	http://purl.org/coar/resource_type/c_db06
dc.type.content.es_CO.fl_str_mv	Text
dc.type.redcol.none.fl_str_mv	https://purl.org/redcol/resource_type/TD
format	http://purl.org/coar/resource_type/c_db06
status_str	acceptedVersion
dc.identifier.uri.none.fl_str_mv	http://hdl.handle.net/1992/64595
dc.identifier.doi.none.fl_str_mv	10.57784/1992/64595
dc.identifier.instname.es_CO.fl_str_mv	instname:Universidad de los Andes
dc.identifier.reponame.es_CO.fl_str_mv	reponame:Repositorio Institucional Séneca
dc.identifier.repourl.es_CO.fl_str_mv	repourl:https://repositorio.uniandes.edu.co/
url	http://hdl.handle.net/1992/64595
identifier_str_mv	10.57784/1992/64595 instname:Universidad de los Andes reponame:Repositorio Institucional Séneca repourl:https://repositorio.uniandes.edu.co/
dc.language.iso.es_CO.fl_str_mv	eng
language	eng
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spelling	Attribution-NonCommercial-NoDerivatives 4.0 Internacionalhttps://repositorio.uniandes.edu.co/static/pdf/aceptacion_uso_es.pdfinfo:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Vives Flórez, Martha Josefinavirtual::15294-1Hernández Villamizar, Santiago5e1e4543-3ca8-4396-8238-ed5c98f6f327600Celis Ramírez, Adriana MarcelaRodríguez Villamizar, FernandoCentro de Investigaciones Microbiológicas - CIMIC2023-02-03T15:24:46Z2023-02-03T15:24:46Z2023-02-02http://hdl.handle.net/1992/6459510.57784/1992/64595instname:Universidad de los Andesreponame:Repositorio Institucional Sénecarepourl:https://repositorio.uniandes.edu.co/En esta tesis doctoral se usaron técnicas y metodologías de microbiología tradicional, moleculares y secuenciación de última generación para análisis de células, proteínas, ADN y ARN.La fagoterapia es una alternativa viable para controlar infecciones bacterianas, sin embargo, entender como la bacterias y fagos interactúan dependiendo del ambiente es crucial para tener un tratamiento efectivo. Muchas de las aplicaciones de fagos son realizadas sobre ambientes anaerobios (intestino, heridas), entonces entender el efecto de la falta o limitación de oxígeno en la interacción fago-hospedero se hace necesaria. Desde 1975 no se han publicado investigaciones para elucidar el efecto de la ausencia de oxígeno en el proceso de infección del fago. En este estudio nosotros reportamos este efecto en un modelo Salmonella sp.-fago, dada su importancia como patógeno y contaminante bacteriano en ambiente anaerobios, y el potencial de la fagoterapia para controlarla. Encontramos que el ciclo de replicación viral, la reducción de la población bacteriana por unidad de tiempo, y el desarrollo de resistencia son influenciadas por la anaerobiosis de la siguiente manera: a) el fago es afectado en la longitud de su ciclo de vida y en su capacidad para controlar la población bacteriana; b) se observó que el tamaño celular bacteriano está asociado a la cantidad de proteína FtsZ y que se altera la aparición de resistencia en contra del fago. Asimismo, los resultados de los análisis transcriptómicos sugieren que la infección en condiciones aeróbicas induce metabolismo anaerobio, específicamente nitrato reducción, y hay subexpresión de genes asociados con respiración aeróbica en la bacteria. En la infección anaeróbica no se observó cambios al metabolismo de generación de energía usado por la bacteria en crecimiento anaeróbico, pero sí se evidenció aumento en la transcripción de genes relacionados con el transporte de aceptores de electrones usados en anaerobiosis. Independiente la condición de oxígeno, los resultados mostraron que la mayoría de los genes con expresión diferencial en la infección fueron aquellos clasificados en la categoría de función desconocida o no pudieron ser anotados. Los resultados en conjunto dan un panorama de cómo la ausencia de oxígeno pude afectar la interacción fago-hospedero, y cuyas consecuencias deberían ser consideradas al momento de usar los fagos biotecnologicamente.Doctor en Ciencias - BiologíaDoctoradoBacteriófagos80 páginasapplication/pdfengUniversidad de los AndesDoctorado en Ciencias - BiologíaFacultad de CienciasDepartamento de Ciencias BiológicasAnaerobiosis: a new gamer in phage-host interactionTrabajo de grado - Doctoradoinfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/acceptedVersionhttp://purl.org/coar/resource_type/c_db06Texthttps://purl.org/redcol/resource_type/TDBacteriófagosSalmonellaAnaerobiosisTranscriptómicaBiologíaAbedon ST, Kuhl SJ, Blasdel BG, Kutter EM. 2011. Phage treatment of human infections. 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