Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa

Historically, Pseudomonas aeruginosa research has been focused on its clinical importance as a common opportunistic nosocomial pathogen, even when its primary habitat must be the environment; few studies report the genetics, population dynamics or physiology of environmental strains. The lack of kno...

Full description

Autores:
Lara Rodríguez, Ana Catalina
Tipo de recurso:
Doctoral thesis
Fecha de publicación:
2018
Institución:
Universidad de los Andes
Repositorio:
Séneca: repositorio Uniandes
Idioma:
eng
OAI Identifier:
oai:repositorio.uniandes.edu.co:1992/38720
Acceso en línea:
http://hdl.handle.net/1992/38720
Palabra clave:
Pseudomonas aeruginosa - Genética - Investigaciones
Pseudomonas aeruginosa - Fisiología - Investigaciones
Bacterias gramnegativas - Investigaciones
Biodegradación - Investigaciones
Petróleo - Investigaciones
Biología
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-sa/4.0/
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spelling Al consultar y hacer uso de este recurso, está aceptando las condiciones de uso establecidas por los autores.http://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Riaño Pachón, Diego Mauricio546d145b-74e9-4dad-9a5e-62033664a345500Vives Flórez, Martha Josefinavirtual::3461-1Lara Rodríguez, Ana Catalina8889500Angel, RoeyReyes Muñoz, Alejandro2020-06-10T14:28:59Z2020-06-10T14:28:59Z2018http://hdl.handle.net/1992/3872010.57784/1992/38720u808503.pdfinstname:Universidad de los Andesreponame:Repositorio Institucional Sénecarepourl:https://repositorio.uniandes.edu.co/Historically, Pseudomonas aeruginosa research has been focused on its clinical importance as a common opportunistic nosocomial pathogen, even when its primary habitat must be the environment; few studies report the genetics, population dynamics or physiology of environmental strains. The lack of knowledge about P. aeruginosa behavior in the environment gives only a partial picture of its evolution since the bacteria changes its natural habitat. The general aim of this project is to contribute to the understanding of the genetic structure and population composition of Pseudomonas aeruginosa by producing new information given by strictly environmental isolates genomes and the transcriptomics of biofilms during crude oil biodegradation. In the first chapter, a revision of literature is presented to show and analyze the current model for Pseudomonas aeruginosa degradation of crude oil hydrocarbons. The second chapter addresses what genomic features of the "clinical group" and the "environmental group" are consistent amongst both groups or"Históricamente la investigación sobre, Pseudomonas aeruginosa se ha enfocado en su importancia clínica como un patógeno nosocomial, oportunista y bastante común. Incluso cuando su hábitat principal debe ser el ambiente, muy pocos estudios reportan la genética, dinámica poblacional o la fisiología de cepas ambientales."-- Tomado del Formato de Documento de GradoDoctor en Ciencias - BiologíaDoctorado120 hojasapplication/pdfengUniandesDoctorado en Ciencias - BiologíaFacultad de CienciasDepartamento de Biologíainstname:Universidad de los Andesreponame:Repositorio Institucional SénecaGenetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosaTrabajo de grado - Doctoradoinfo:eu-repo/semantics/doctoralThesishttp://purl.org/coar/resource_type/c_db06http://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/TDPseudomonas aeruginosa - Genética - InvestigacionesPseudomonas aeruginosa - Fisiología - InvestigacionesBacterias gramnegativas - InvestigacionesBiodegradación - InvestigacionesPetróleo - InvestigacionesBiologíaPublicationhttps://scholar.google.es/citations?user=FmskIBcAAAAJvirtual::3461-10000-0001-7795-1494virtual::3461-1https://scienti.minciencias.gov.co/cvlac/visualizador/generarCurriculoCv.do?cod_rh=0000190195virtual::3461-1324db0c6-0b71-49b7-846b-c997885dbe42virtual::3461-1324db0c6-0b71-49b7-846b-c997885dbe42virtual::3461-1TEXTu808503.pdf.txtu808503.pdf.txtExtracted texttext/plain257313https://repositorio.uniandes.edu.co/bitstreams/e2fbedf4-55bd-4cf1-9a23-853d3646d774/downloadb056094ae09a07959cd4905959b7c755MD56ORIGINALu808503.pdfapplication/pdf2670501https://repositorio.uniandes.edu.co/bitstreams/92ed6ca6-c600-4020-b3bd-fc73acc29f5f/downloadd35b5dce71dfd547aa4d0e0fb4a888dcMD51THUMBNAILu808503.pdf.jpgu808503.pdf.jpgIM Thumbnailimage/jpeg8044https://repositorio.uniandes.edu.co/bitstreams/39cb7e5f-0d6b-4d11-97cf-cc8689d609e8/download0cf8821d79fb1b8dcac8750d22a6dfdcMD571992/38720oai:repositorio.uniandes.edu.co:1992/387202024-08-26 15:21:27.213http://creativecommons.org/licenses/by-nc-sa/4.0/open.accesshttps://repositorio.uniandes.edu.coRepositorio institucional Sénecaadminrepositorio@uniandes.edu.co
dc.title.es_CO.fl_str_mv Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
title Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
spellingShingle Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
Pseudomonas aeruginosa - Genética - Investigaciones
Pseudomonas aeruginosa - Fisiología - Investigaciones
Bacterias gramnegativas - Investigaciones
Biodegradación - Investigaciones
Petróleo - Investigaciones
Biología
title_short Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
title_full Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
title_fullStr Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
title_full_unstemmed Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
title_sort Genetic structure and crude oil associated transcriptomic profile of environmental and clinical strains of pseudomonas aeruginosa
dc.creator.fl_str_mv Lara Rodríguez, Ana Catalina
dc.contributor.advisor.none.fl_str_mv Riaño Pachón, Diego Mauricio
Vives Flórez, Martha Josefina
dc.contributor.author.none.fl_str_mv Lara Rodríguez, Ana Catalina
dc.contributor.jury.none.fl_str_mv Angel, Roey
Reyes Muñoz, Alejandro
dc.subject.keyword.es_CO.fl_str_mv Pseudomonas aeruginosa - Genética - Investigaciones
Pseudomonas aeruginosa - Fisiología - Investigaciones
Bacterias gramnegativas - Investigaciones
Biodegradación - Investigaciones
Petróleo - Investigaciones
topic Pseudomonas aeruginosa - Genética - Investigaciones
Pseudomonas aeruginosa - Fisiología - Investigaciones
Bacterias gramnegativas - Investigaciones
Biodegradación - Investigaciones
Petróleo - Investigaciones
Biología
dc.subject.themes.none.fl_str_mv Biología
description Historically, Pseudomonas aeruginosa research has been focused on its clinical importance as a common opportunistic nosocomial pathogen, even when its primary habitat must be the environment; few studies report the genetics, population dynamics or physiology of environmental strains. The lack of knowledge about P. aeruginosa behavior in the environment gives only a partial picture of its evolution since the bacteria changes its natural habitat. The general aim of this project is to contribute to the understanding of the genetic structure and population composition of Pseudomonas aeruginosa by producing new information given by strictly environmental isolates genomes and the transcriptomics of biofilms during crude oil biodegradation. In the first chapter, a revision of literature is presented to show and analyze the current model for Pseudomonas aeruginosa degradation of crude oil hydrocarbons. The second chapter addresses what genomic features of the "clinical group" and the "environmental group" are consistent amongst both groups or
publishDate 2018
dc.date.issued.none.fl_str_mv 2018
dc.date.accessioned.none.fl_str_mv 2020-06-10T14:28:59Z
dc.date.available.none.fl_str_mv 2020-06-10T14:28:59Z
dc.type.spa.fl_str_mv Trabajo de grado - Doctorado
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dc.identifier.pdf.none.fl_str_mv u808503.pdf
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eu_rights_str_mv openAccess
dc.format.extent.es_CO.fl_str_mv 120 hojas
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dc.publisher.es_CO.fl_str_mv Uniandes
dc.publisher.program.es_CO.fl_str_mv Doctorado en Ciencias - Biología
dc.publisher.faculty.es_CO.fl_str_mv Facultad de Ciencias
dc.publisher.department.es_CO.fl_str_mv Departamento de Biología
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