Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
The oomycete Phytophthora infestans (Mont.) de Bary, the causal agent of the tomato and potato late blight, causes tremendous crop and economic losses worldwide. In Colombia this pathogen is currently a devastating risk for the highlands dedicated to production of potato and tomato, hosts of this oo...
- Autores:
-
Garavito Diago, Manuel Fernando
- Tipo de recurso:
- Fecha de publicación:
- 2010
- Institución:
- Universidad de los Andes
- Repositorio:
- Séneca: repositorio Uniandes
- Idioma:
- eng
- OAI Identifier:
- oai:repositorio.uniandes.edu.co:1992/11193
- Acceso en línea:
- http://hdl.handle.net/1992/11193
- Palabra clave:
- Fitoftora - Investigaciones
Dihydroorotate dehydrogenase - Investigaciones
Genética vegetal - Investigaciones
Papas (Tubérculos) - Enfermedades y plagas
Tomates - Enfermedades y plagas
Biología
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-sa/4.0/
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Al consultar y hacer uso de este recurso, está aceptando las condiciones de uso establecidas por los autores.http://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Zimmermann, Barbara Hanna81271423-588b-479b-a844-0d7443608a49600Restrepo Restrepo, Silviavirtual::13583-1Garavito Diago, Manuel Fernandoddaa510d-a206-4636-8774-502ac65613606002018-09-28T07:48:45Z2018-09-28T07:48:45Z2010http://hdl.handle.net/1992/11193u405079.pdfinstname:Universidad de los Andesreponame:Repositorio Institucional Sénecarepourl:https://repositorio.uniandes.edu.co/The oomycete Phytophthora infestans (Mont.) de Bary, the causal agent of the tomato and potato late blight, causes tremendous crop and economic losses worldwide. In Colombia this pathogen is currently a devastating risk for the highlands dedicated to production of potato and tomato, hosts of this oomycete. Yet, current control strategies are far from being adequate and new ones are urgently needed. An interesting and unexplored alternative to control human parasites based on the inhibition of the de novo pyrimidine biosynthetic pathway might work as well in P. infestans. In this study we investigated the pathogen's dihydroorotase dehydrogenase DHODase, which catalyzes the fourth and only redox step of the pathway as a target to develop control strategies. We propose that this enzyme is member of the DHODase family 2, which compromises a mitochondrial bound enzyme with quinones as direct electron acceptors. In silico, preliminary molecular docking assays using homology modeled structures reveal that key structural aspects of the enzyme such as its apparent binding site flexibility could be exploited to develop species-selective inhibitors. A full length and an N-terminally truncated DHODase were expressed as recombinant proteins and complemented a DHODase-deficient bacterial host.Magíster en Ciencias BiológicasMaestría23 hojasapplication/pdfengUniandesMaestría en Ciencias BiológicasFacultad de CienciasDepartamento de Biologíainstname:Universidad de los Andesreponame:Repositorio Institucional SénecaDihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop controlTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesishttp://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/TMFitoftora - InvestigacionesDihydroorotate dehydrogenase - InvestigacionesGenética vegetal - InvestigacionesPapas (Tubérculos) - Enfermedades y plagasTomates - Enfermedades y plagasBiologíaPublicationhttps://scholar.google.es/citations?user=7_dVIeAAAAAJvirtual::13583-10000-0001-9016-1040virtual::13583-1https://scienti.minciencias.gov.co/cvlac/visualizador/generarCurriculoCv.do?cod_rh=0000468800virtual::13583-1d7d594d1-aae9-471e-be1d-fc6bbcabef5cvirtual::13583-1d7d594d1-aae9-471e-be1d-fc6bbcabef5cvirtual::13583-1TEXTu405079.pdf.txtu405079.pdf.txtExtracted texttext/plain82215https://repositorio.uniandes.edu.co/bitstreams/97199503-6985-4e1d-8ff5-5e3b6da1bac5/download8479a054fca8bc1dec8577ecda6f6d34MD54THUMBNAILu405079.pdf.jpgu405079.pdf.jpgIM Thumbnailimage/jpeg25266https://repositorio.uniandes.edu.co/bitstreams/4e45aaef-0fff-4c78-96cb-19c8b57e1783/download45783c5d2183035bfbb082587f7b3cdfMD55ORIGINALu405079.pdfapplication/pdf786504https://repositorio.uniandes.edu.co/bitstreams/808c508d-f197-4761-a4f6-050711ff2a45/download22f027aa03d435af239cc7ee36b76c57MD511992/11193oai:repositorio.uniandes.edu.co:1992/111932024-03-13 14:58:25.533http://creativecommons.org/licenses/by-nc-sa/4.0/open.accesshttps://repositorio.uniandes.edu.coRepositorio institucional Sénecaadminrepositorio@uniandes.edu.co |
dc.title.es_CO.fl_str_mv |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
title |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
spellingShingle |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control Fitoftora - Investigaciones Dihydroorotate dehydrogenase - Investigaciones Genética vegetal - Investigaciones Papas (Tubérculos) - Enfermedades y plagas Tomates - Enfermedades y plagas Biología |
title_short |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
title_full |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
title_fullStr |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
title_full_unstemmed |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
title_sort |
Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control |
dc.creator.fl_str_mv |
Garavito Diago, Manuel Fernando |
dc.contributor.advisor.none.fl_str_mv |
Zimmermann, Barbara Hanna Restrepo Restrepo, Silvia |
dc.contributor.author.none.fl_str_mv |
Garavito Diago, Manuel Fernando |
dc.subject.keyword.es_CO.fl_str_mv |
Fitoftora - Investigaciones Dihydroorotate dehydrogenase - Investigaciones Genética vegetal - Investigaciones Papas (Tubérculos) - Enfermedades y plagas Tomates - Enfermedades y plagas |
topic |
Fitoftora - Investigaciones Dihydroorotate dehydrogenase - Investigaciones Genética vegetal - Investigaciones Papas (Tubérculos) - Enfermedades y plagas Tomates - Enfermedades y plagas Biología |
dc.subject.themes.none.fl_str_mv |
Biología |
description |
The oomycete Phytophthora infestans (Mont.) de Bary, the causal agent of the tomato and potato late blight, causes tremendous crop and economic losses worldwide. In Colombia this pathogen is currently a devastating risk for the highlands dedicated to production of potato and tomato, hosts of this oomycete. Yet, current control strategies are far from being adequate and new ones are urgently needed. An interesting and unexplored alternative to control human parasites based on the inhibition of the de novo pyrimidine biosynthetic pathway might work as well in P. infestans. In this study we investigated the pathogen's dihydroorotase dehydrogenase DHODase, which catalyzes the fourth and only redox step of the pathway as a target to develop control strategies. We propose that this enzyme is member of the DHODase family 2, which compromises a mitochondrial bound enzyme with quinones as direct electron acceptors. In silico, preliminary molecular docking assays using homology modeled structures reveal that key structural aspects of the enzyme such as its apparent binding site flexibility could be exploited to develop species-selective inhibitors. A full length and an N-terminally truncated DHODase were expressed as recombinant proteins and complemented a DHODase-deficient bacterial host. |
publishDate |
2010 |
dc.date.issued.none.fl_str_mv |
2010 |
dc.date.accessioned.none.fl_str_mv |
2018-09-28T07:48:45Z |
dc.date.available.none.fl_str_mv |
2018-09-28T07:48:45Z |
dc.type.spa.fl_str_mv |
Trabajo de grado - Maestría |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/masterThesis |
dc.type.content.spa.fl_str_mv |
Text |
dc.type.redcol.spa.fl_str_mv |
http://purl.org/redcol/resource_type/TM |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/1992/11193 |
dc.identifier.pdf.none.fl_str_mv |
u405079.pdf |
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reponame:Repositorio Institucional Séneca |
dc.identifier.repourl.spa.fl_str_mv |
repourl:https://repositorio.uniandes.edu.co/ |
url |
http://hdl.handle.net/1992/11193 |
identifier_str_mv |
u405079.pdf instname:Universidad de los Andes reponame:Repositorio Institucional Séneca repourl:https://repositorio.uniandes.edu.co/ |
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eng |
language |
eng |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-sa/4.0/ |
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info:eu-repo/semantics/openAccess |
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http://creativecommons.org/licenses/by-nc-sa/4.0/ http://purl.org/coar/access_right/c_abf2 |
eu_rights_str_mv |
openAccess |
dc.format.extent.es_CO.fl_str_mv |
23 hojas |
dc.format.mimetype.es_CO.fl_str_mv |
application/pdf |
dc.publisher.es_CO.fl_str_mv |
Uniandes |
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Maestría en Ciencias Biológicas |
dc.publisher.faculty.es_CO.fl_str_mv |
Facultad de Ciencias |
dc.publisher.department.es_CO.fl_str_mv |
Departamento de Biología |
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