Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control

The oomycete Phytophthora infestans (Mont.) de Bary, the causal agent of the tomato and potato late blight, causes tremendous crop and economic losses worldwide. In Colombia this pathogen is currently a devastating risk for the highlands dedicated to production of potato and tomato, hosts of this oo...

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Autores:
Garavito Diago, Manuel Fernando
Tipo de recurso:
Fecha de publicación:
2010
Institución:
Universidad de los Andes
Repositorio:
Séneca: repositorio Uniandes
Idioma:
eng
OAI Identifier:
oai:repositorio.uniandes.edu.co:1992/11193
Acceso en línea:
http://hdl.handle.net/1992/11193
Palabra clave:
Fitoftora - Investigaciones
Dihydroorotate dehydrogenase - Investigaciones
Genética vegetal - Investigaciones
Papas (Tubérculos) - Enfermedades y plagas
Tomates - Enfermedades y plagas
Biología
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-sa/4.0/
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spelling Al consultar y hacer uso de este recurso, está aceptando las condiciones de uso establecidas por los autores.http://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Zimmermann, Barbara Hanna81271423-588b-479b-a844-0d7443608a49600Restrepo Restrepo, Silviavirtual::13583-1Garavito Diago, Manuel Fernandoddaa510d-a206-4636-8774-502ac65613606002018-09-28T07:48:45Z2018-09-28T07:48:45Z2010http://hdl.handle.net/1992/11193u405079.pdfinstname:Universidad de los Andesreponame:Repositorio Institucional Sénecarepourl:https://repositorio.uniandes.edu.co/The oomycete Phytophthora infestans (Mont.) de Bary, the causal agent of the tomato and potato late blight, causes tremendous crop and economic losses worldwide. In Colombia this pathogen is currently a devastating risk for the highlands dedicated to production of potato and tomato, hosts of this oomycete. Yet, current control strategies are far from being adequate and new ones are urgently needed. An interesting and unexplored alternative to control human parasites based on the inhibition of the de novo pyrimidine biosynthetic pathway might work as well in P. infestans. In this study we investigated the pathogen's dihydroorotase dehydrogenase DHODase, which catalyzes the fourth and only redox step of the pathway as a target to develop control strategies. We propose that this enzyme is member of the DHODase family 2, which compromises a mitochondrial bound enzyme with quinones as direct electron acceptors. In silico, preliminary molecular docking assays using homology modeled structures reveal that key structural aspects of the enzyme such as its apparent binding site flexibility could be exploited to develop species-selective inhibitors. A full length and an N-terminally truncated DHODase were expressed as recombinant proteins and complemented a DHODase-deficient bacterial host.Magíster en Ciencias BiológicasMaestría23 hojasapplication/pdfengUniandesMaestría en Ciencias BiológicasFacultad de CienciasDepartamento de Biologíainstname:Universidad de los Andesreponame:Repositorio Institucional SénecaDihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop controlTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesishttp://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/TMFitoftora - InvestigacionesDihydroorotate dehydrogenase - InvestigacionesGenética vegetal - InvestigacionesPapas (Tubérculos) - Enfermedades y plagasTomates - Enfermedades y plagasBiologíaPublicationhttps://scholar.google.es/citations?user=7_dVIeAAAAAJvirtual::13583-10000-0001-9016-1040virtual::13583-1https://scienti.minciencias.gov.co/cvlac/visualizador/generarCurriculoCv.do?cod_rh=0000468800virtual::13583-1d7d594d1-aae9-471e-be1d-fc6bbcabef5cvirtual::13583-1d7d594d1-aae9-471e-be1d-fc6bbcabef5cvirtual::13583-1TEXTu405079.pdf.txtu405079.pdf.txtExtracted texttext/plain82215https://repositorio.uniandes.edu.co/bitstreams/97199503-6985-4e1d-8ff5-5e3b6da1bac5/download8479a054fca8bc1dec8577ecda6f6d34MD54THUMBNAILu405079.pdf.jpgu405079.pdf.jpgIM Thumbnailimage/jpeg25266https://repositorio.uniandes.edu.co/bitstreams/4e45aaef-0fff-4c78-96cb-19c8b57e1783/download45783c5d2183035bfbb082587f7b3cdfMD55ORIGINALu405079.pdfapplication/pdf786504https://repositorio.uniandes.edu.co/bitstreams/808c508d-f197-4761-a4f6-050711ff2a45/download22f027aa03d435af239cc7ee36b76c57MD511992/11193oai:repositorio.uniandes.edu.co:1992/111932024-03-13 14:58:25.533http://creativecommons.org/licenses/by-nc-sa/4.0/open.accesshttps://repositorio.uniandes.edu.coRepositorio institucional Sénecaadminrepositorio@uniandes.edu.co
dc.title.es_CO.fl_str_mv Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
title Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
spellingShingle Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
Fitoftora - Investigaciones
Dihydroorotate dehydrogenase - Investigaciones
Genética vegetal - Investigaciones
Papas (Tubérculos) - Enfermedades y plagas
Tomates - Enfermedades y plagas
Biología
title_short Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
title_full Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
title_fullStr Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
title_full_unstemmed Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
title_sort Dihydroorotate dehydrogenase from the Phytopathogenic Oomycete Phytophthora infestans as a novel target for crop control
dc.creator.fl_str_mv Garavito Diago, Manuel Fernando
dc.contributor.advisor.none.fl_str_mv Zimmermann, Barbara Hanna
Restrepo Restrepo, Silvia
dc.contributor.author.none.fl_str_mv Garavito Diago, Manuel Fernando
dc.subject.keyword.es_CO.fl_str_mv Fitoftora - Investigaciones
Dihydroorotate dehydrogenase - Investigaciones
Genética vegetal - Investigaciones
Papas (Tubérculos) - Enfermedades y plagas
Tomates - Enfermedades y plagas
topic Fitoftora - Investigaciones
Dihydroorotate dehydrogenase - Investigaciones
Genética vegetal - Investigaciones
Papas (Tubérculos) - Enfermedades y plagas
Tomates - Enfermedades y plagas
Biología
dc.subject.themes.none.fl_str_mv Biología
description The oomycete Phytophthora infestans (Mont.) de Bary, the causal agent of the tomato and potato late blight, causes tremendous crop and economic losses worldwide. In Colombia this pathogen is currently a devastating risk for the highlands dedicated to production of potato and tomato, hosts of this oomycete. Yet, current control strategies are far from being adequate and new ones are urgently needed. An interesting and unexplored alternative to control human parasites based on the inhibition of the de novo pyrimidine biosynthetic pathway might work as well in P. infestans. In this study we investigated the pathogen's dihydroorotase dehydrogenase DHODase, which catalyzes the fourth and only redox step of the pathway as a target to develop control strategies. We propose that this enzyme is member of the DHODase family 2, which compromises a mitochondrial bound enzyme with quinones as direct electron acceptors. In silico, preliminary molecular docking assays using homology modeled structures reveal that key structural aspects of the enzyme such as its apparent binding site flexibility could be exploited to develop species-selective inhibitors. A full length and an N-terminally truncated DHODase were expressed as recombinant proteins and complemented a DHODase-deficient bacterial host.
publishDate 2010
dc.date.issued.none.fl_str_mv 2010
dc.date.accessioned.none.fl_str_mv 2018-09-28T07:48:45Z
dc.date.available.none.fl_str_mv 2018-09-28T07:48:45Z
dc.type.spa.fl_str_mv Trabajo de grado - Maestría
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dc.type.content.spa.fl_str_mv Text
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dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/1992/11193
dc.identifier.pdf.none.fl_str_mv u405079.pdf
dc.identifier.instname.spa.fl_str_mv instname:Universidad de los Andes
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Séneca
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identifier_str_mv u405079.pdf
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http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.extent.es_CO.fl_str_mv 23 hojas
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dc.publisher.program.es_CO.fl_str_mv Maestría en Ciencias Biológicas
dc.publisher.faculty.es_CO.fl_str_mv Facultad de Ciencias
dc.publisher.department.es_CO.fl_str_mv Departamento de Biología
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