Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia

Background Community-genotype methicillin-resistant Staphylococcus aureus (CG-MRSA) clones are a global concern due to their resistance and increased virulence and their ability to cause infections both hospitalized patients and healthy people in the community. Here, we characterize 32 isolates of a...

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Autores:
Reyes, Niradiz
Rebollo, Juan
Pinzón, Hernando
Tovar, Catalina
Moreno-Castañeda, Jaime
Corredor Rozo, Zayda Lorena
Moncada, Maria Victoria
Vanegas, Natasha
Castro Cardozo, Betsy Esperanza
Escobar-Pérez, Javier
Marquez-Ortiz, Ricaurte Alejandro
Tipo de recurso:
Fecha de publicación:
2017
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/1566
Acceso en línea:
http://hdl.handle.net/20.500.12495/1566
https://doi.org/10.1186/s12879-017-2193-3
Palabra clave:
Farmacorresistencia microbiana
Clonación de organismos
Staphylococcus aureus resistente a meticilina
Epidemiología
Methicillin-resistant staphylococcus aureus
Community
New clone
Rights
License
Attribution 4.0 International
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oai_identifier_str oai:repositorio.unbosque.edu.co:20.500.12495/1566
network_acronym_str UNBOSQUE2
network_name_str Repositorio U. El Bosque
repository_id_str
dc.title.spa.fl_str_mv Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
title Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
spellingShingle Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
Farmacorresistencia microbiana
Clonación de organismos
Staphylococcus aureus resistente a meticilina
Epidemiología
Methicillin-resistant staphylococcus aureus
Community
New clone
title_short Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
title_full Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
title_fullStr Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
title_full_unstemmed Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
title_sort Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombia
dc.creator.fl_str_mv Reyes, Niradiz
Rebollo, Juan
Pinzón, Hernando
Tovar, Catalina
Moreno-Castañeda, Jaime
Corredor Rozo, Zayda Lorena
Moncada, Maria Victoria
Vanegas, Natasha
Castro Cardozo, Betsy Esperanza
Escobar-Pérez, Javier
Marquez-Ortiz, Ricaurte Alejandro
dc.contributor.author.none.fl_str_mv Reyes, Niradiz
Rebollo, Juan
Pinzón, Hernando
Tovar, Catalina
Moreno-Castañeda, Jaime
Corredor Rozo, Zayda Lorena
Moncada, Maria Victoria
Vanegas, Natasha
Castro Cardozo, Betsy Esperanza
Escobar-Pérez, Javier
Marquez-Ortiz, Ricaurte Alejandro
dc.contributor.orcid.none.fl_str_mv Escobar-Pérez, Javier [0000-0002-0432-6978]
dc.subject.decs.spa.fl_str_mv Farmacorresistencia microbiana
Clonación de organismos
Staphylococcus aureus resistente a meticilina
Epidemiología
topic Farmacorresistencia microbiana
Clonación de organismos
Staphylococcus aureus resistente a meticilina
Epidemiología
Methicillin-resistant staphylococcus aureus
Community
New clone
dc.subject.keywords.spa.fl_str_mv Methicillin-resistant staphylococcus aureus
Community
New clone
description Background Community-genotype methicillin-resistant Staphylococcus aureus (CG-MRSA) clones are a global concern due to their resistance and increased virulence and their ability to cause infections both hospitalized patients and healthy people in the community. Here, we characterize 32 isolates of a new CG-MRSA clone. These isolates were identified in four cities in Colombia, South America. Methods The isolates were recovered from four different epidemiological and prospective studies that were conducted in several regions of Colombia. Molecular characterizations included multilocus sequence typing; pulsed-field gel electrophoresis; SCCmec, agr and spa typing; and whole-genome sequencing. Results All isolates belonged to ST923 (clonal complex 8), harbouring SCCmec IVa and a spa type t1635 and lacking an arginine catabolism mobile element. The isolates were classified as COL923, were resistant to at least one non-beta-lactam antibiotic, and exhibited high frequencies (>60%) of resistance to macrolides and tetracycline. Using whole-genome sequencing, we found that this new clone harbours novel prophage 3 and beta-island structures and a slightly different pathogenicity island 5. Moreover, isolates belonging to the COL923 clone are grouped in a different clade than USA300 and USA300-LV. Conclusion Our results show the emergence and spread of the COL923 clone in different cities in Colombia. This clone is resistant to several antibiotics and possesses new structures in its mobile genetic elements.
publishDate 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2019-07-25T13:56:20Z
dc.date.available.none.fl_str_mv 2019-07-25T13:56:20Z
dc.type.spa.fl_str_mv article
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dc.type.local.spa.fl_str_mv artículo
dc.identifier.issn.none.fl_str_mv 1471-2334
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/1566
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1186/s12879-017-2193-3
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
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identifier_str_mv 1471-2334
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
repourl:https://repositorio.unbosque.edu.co
url http://hdl.handle.net/20.500.12495/1566
https://doi.org/10.1186/s12879-017-2193-3
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv BMC Infectious Diseases, 1471-2334, Vol.17, Nro.108, 2017 p. 1-10
dc.relation.uri.none.fl_str_mv https://bmcinfectdis.biomedcentral.com/articles/10.1186/s12879-017-2193-3
dc.rights.*.fl_str_mv Attribution 4.0 International
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/4.0/
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf363
dc.rights.creativecommons.none.fl_str_mv 2017
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
Acceso abierto
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http://purl.org/coar/access_right/c_abf2
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dc.publisher.spa.fl_str_mv Biomed Central
dc.publisher.journal.spa.fl_str_mv BMC Infectious Diseases
institution Universidad El Bosque
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spelling Reyes, NiradizRebollo, JuanPinzón, HernandoTovar, CatalinaMoreno-Castañeda, JaimeCorredor Rozo, Zayda LorenaMoncada, Maria VictoriaVanegas, NatashaCastro Cardozo, Betsy EsperanzaEscobar-Pérez, JavierMarquez-Ortiz, Ricaurte AlejandroEscobar-Pérez, Javier [0000-0002-0432-6978]2019-07-25T13:56:20Z2019-07-25T13:56:20Z20171471-2334http://hdl.handle.net/20.500.12495/1566https://doi.org/10.1186/s12879-017-2193-3instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengBiomed CentralBMC Infectious DiseasesBMC Infectious Diseases, 1471-2334, Vol.17, Nro.108, 2017 p. 1-10https://bmcinfectdis.biomedcentral.com/articles/10.1186/s12879-017-2193-3Attribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf3632017http://purl.org/coar/access_right/c_abf2Emergence and spread of a new community-genotype methicillin-resistant Staphylococcus aureus clone in Colombiaarticleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Farmacorresistencia microbianaClonación de organismosStaphylococcus aureus resistente a meticilinaEpidemiologíaMethicillin-resistant staphylococcus aureusCommunityNew cloneBackground Community-genotype methicillin-resistant Staphylococcus aureus (CG-MRSA) clones are a global concern due to their resistance and increased virulence and their ability to cause infections both hospitalized patients and healthy people in the community. Here, we characterize 32 isolates of a new CG-MRSA clone. These isolates were identified in four cities in Colombia, South America. Methods The isolates were recovered from four different epidemiological and prospective studies that were conducted in several regions of Colombia. Molecular characterizations included multilocus sequence typing; pulsed-field gel electrophoresis; SCCmec, agr and spa typing; and whole-genome sequencing. Results All isolates belonged to ST923 (clonal complex 8), harbouring SCCmec IVa and a spa type t1635 and lacking an arginine catabolism mobile element. The isolates were classified as COL923, were resistant to at least one non-beta-lactam antibiotic, and exhibited high frequencies (>60%) of resistance to macrolides and tetracycline. Using whole-genome sequencing, we found that this new clone harbours novel prophage 3 and beta-island structures and a slightly different pathogenicity island 5. Moreover, isolates belonging to the COL923 clone are grouped in a different clade than USA300 and USA300-LV. Conclusion Our results show the emergence and spread of the COL923 clone in different cities in Colombia. This clone is resistant to several antibiotics and possesses new structures in its mobile genetic elements.ORIGINALEscobar-Perez J., Reyes N., Marquez-Ortiz R.A., Rebollo J., Pinzón H., Tovar C., Moreno-Castañeda J._2017.pdfEscobar-Perez J., Reyes N., Marquez-Ortiz R.A., Rebollo J., Pinzón H., Tovar C., Moreno-Castañeda J._2017.pdfapplication/pdf1570110http://18.204.144.38/bitstreams/d14f333a-b5d2-4931-bd50-f0c7016c81ed/download66bfb5488e34f307e04c1852b17334a1MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8908http://18.204.144.38/bitstreams/00f3d5ca-d179-4462-ac6d-0387591746d0/download0175ea4a2d4caec4bbcc37e300941108MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://18.204.144.38/bitstreams/798964cc-101c-48fd-acb0-946db0ae7d2e/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILEscobar-Perez J., Reyes N., Marquez-Ortiz R.A., Rebollo J., Pinzón H., Tovar C., Moreno-Castañeda J._2017.pdf.jpgEscobar-Perez J., Reyes N., Marquez-Ortiz R.A., Rebollo J., Pinzón H., Tovar C., Moreno-Castañeda J._2017.pdf.jpgIM Thumbnailimage/jpeg9854http://18.204.144.38/bitstreams/8e97faa2-3cd1-43be-bc97-c69adff113a9/download4a4763ee7fd0dcecf13f21bc67aeb8bbMD54TEXTEscobar-Perez J., Reyes N., Marquez-Ortiz R.A., Rebollo J., Pinzón H., Tovar C., Moreno-Castañeda J._2017.pdf.txtEscobar-Perez J., Reyes N., Marquez-Ortiz R.A., Rebollo J., Pinzón H., Tovar C., Moreno-Castañeda J._2017.pdf.txtExtracted texttext/plain43383http://18.204.144.38/bitstreams/225469ea-41e3-4f6f-8368-dab066169502/downloadb76c1eb68d299190030091215ea809f6MD5520.500.12495/1566oai:18.204.144.38:20.500.12495/15662024-02-06 22:13:52.871http://creativecommons.org/licenses/by/4.0/Attribution 4.0 Internationalopen.accesshttp://18.204.144.38DSpace Pre-instalado Biteca S.A.Sbibliotecas@biteca.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