Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
Objectives: Lung cancer is a heterogeneous disease. Presentation and prognosis are known to vary according to several factors, such as genetic and demographic characteristics. Small-cell lung cancer incidence is increasing in never-smokers. However, the disease phenotype in this population is differ...
- Autores:
-
Corrales, Luis
Martín, Claudio
Freitas, Helano
Cordeiro de Lima, Vladmir Cláudio
Rodríguez Ariza, July Katherine
Ávila Coy, Jenny Mireya
Bravo, Melissa
Archila, Pilar
Carranza Isaza, Hernán
Vargas Báez, Carlos Alberto
Otero, Jorge
Barrón, Feliciano
Karachaliou, Niki
Rosell, Rafael
Cardona-Mendoza, Andrés Felipe
Rojas Puentes, Leonardo
Zatarain Barrón, Zyanya Lucia
Ruíz-Patiño, Alejandro
Ricaurte, Luisa
Arrieta, Oscar
- Tipo de recurso:
- Fecha de publicación:
- 2019
- Institución:
- Universidad El Bosque
- Repositorio:
- Repositorio U. El Bosque
- Idioma:
- eng
- OAI Identifier:
- oai:repositorio.unbosque.edu.co:20.500.12495/1712
- Palabra clave:
- Neoplasias pulmonares
Variación genética
Características de la población
Small-cell lung cancer
Genome profile
Next-generation sequencing
- Rights
- License
- Attribution 4.0 International
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|
dc.title.spa.fl_str_mv |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
title |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
spellingShingle |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) Neoplasias pulmonares Variación genética Características de la población Small-cell lung cancer Genome profile Next-generation sequencing |
title_short |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
title_full |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
title_fullStr |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
title_full_unstemmed |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
title_sort |
Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP) |
dc.creator.fl_str_mv |
Corrales, Luis Martín, Claudio Freitas, Helano Cordeiro de Lima, Vladmir Cláudio Rodríguez Ariza, July Katherine Ávila Coy, Jenny Mireya Bravo, Melissa Archila, Pilar Carranza Isaza, Hernán Vargas Báez, Carlos Alberto Otero, Jorge Barrón, Feliciano Karachaliou, Niki Rosell, Rafael Cardona-Mendoza, Andrés Felipe Rojas Puentes, Leonardo Zatarain Barrón, Zyanya Lucia Ruíz-Patiño, Alejandro Ricaurte, Luisa Arrieta, Oscar |
dc.contributor.author.none.fl_str_mv |
Corrales, Luis Martín, Claudio Freitas, Helano Cordeiro de Lima, Vladmir Cláudio Rodríguez Ariza, July Katherine Ávila Coy, Jenny Mireya Bravo, Melissa Archila, Pilar Carranza Isaza, Hernán Vargas Báez, Carlos Alberto Otero, Jorge Barrón, Feliciano Karachaliou, Niki Rosell, Rafael Cardona-Mendoza, Andrés Felipe Rojas Puentes, Leonardo Zatarain Barrón, Zyanya Lucia Ruíz-Patiño, Alejandro Ricaurte, Luisa Arrieta, Oscar |
dc.contributor.orcid.none.fl_str_mv |
Cardona-Mendoza, Andrés Felipe [0000-0002-6697-5471] Carranza Isaza, Hernán [0000-0002-3593-7405] Vargas Báez, Carlos Alberto [0000-0002-6076-8260] Rojas Puentes, Leonardo [0000-0002-7865-5424] Ruíz-Patiño, Alejandro [0000-0003-1274-9273] Rodríguez Ariza, July Katherine [0000-0003-1168-595X] Ávila Coy, Jenny Mireya [0000-0002-2968-7980] |
dc.subject.decs.spa.fl_str_mv |
Neoplasias pulmonares Variación genética Características de la población |
topic |
Neoplasias pulmonares Variación genética Características de la población Small-cell lung cancer Genome profile Next-generation sequencing |
dc.subject.keywords.spa.fl_str_mv |
Small-cell lung cancer Genome profile Next-generation sequencing |
description |
Objectives: Lung cancer is a heterogeneous disease. Presentation and prognosis are known to vary according to several factors, such as genetic and demographic characteristics. Small-cell lung cancer incidence is increasing in never-smokers. However, the disease phenotype in this population is different compared with patients who have a smoking history. Material and Methods: To further investigate the clinical and genetic characteristics of this patient subgroup, a cohort of small cell lung cancer patients was divided into smokers (n = 10) and never/ever-smokers (n = 10). A somatic mutation profile was obtained using a comprehensive NGS assay. Clinical outcomes were compared using the Kaplan-Meier method and Cox proportional models. Results: Median age was 63 years (46–81), 40% were men, and 90% had extended disease. Smoker patients had significantly more cerebral metastases (p = 0.04) and were older (p = 0.03) compared to their non-smoker counterparts. For never/ever smokers, the main genetic mutations were TP53 (80%), RB1 (40%), CYLD (30%), and EGFR (30%). Smoker patients had more RB1 (80%, p = 0.04), CDKN2A (30%, p = 0.05), and CEBPA (30%, p = 0.05) mutations. Response rates to first-line therapy with etoposide plus cisplatin/carboplatin were 50% in smokers and 90% in never/ever smokers (p = 0.141). Median overall survival was significantly longer in never smokers compared with smokers (29.1 months [23.5–34.6] vs. 17.3 months [4.8–29.7]; p = 0.0054). Never/ever smoking history (HR 0.543, 95% CI 0.41–0.80), limited-stage disease (HR 0.56, 95% CI 0.40–0.91) and response to first-line platinum-based chemotherapy (HR 0.63, 95% CI 0.60–0.92) were independently associated with good prognosis. Conclusion: Our data supports that never/ever smoker patients with small-cell lung cancer have better prognosis compared to their smoker counterparts. Further, patients with never/ever smoking history who present with small-cell lung cancer have a different mutation profile compared with smokers, including a high frequency of EGFR, MET, and SMAD4 mutations. Further studies are required to assess whether the differential mutation profile is a consequence of a diverse pathological mechanism for disease onset. |
publishDate |
2019 |
dc.date.accessioned.none.fl_str_mv |
2019-09-16T18:01:13Z |
dc.date.available.none.fl_str_mv |
2019-09-16T18:01:13Z |
dc.date.issued.none.fl_str_mv |
2019 |
dc.type.spa.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.local.spa.fl_str_mv |
artículo |
dc.identifier.issn.none.fl_str_mv |
2234-943X |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/20.500.12495/1712 |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.3389/fonc.2019.00254 |
dc.identifier.instname.spa.fl_str_mv |
instname:Universidad El Bosque |
dc.identifier.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional Universidad El Bosque |
dc.identifier.repourl.none.fl_str_mv |
repourl:https://repositorio.unbosque.edu.co |
identifier_str_mv |
2234-943X instname:Universidad El Bosque reponame:Repositorio Institucional Universidad El Bosque repourl:https://repositorio.unbosque.edu.co |
url |
http://hdl.handle.net/20.500.12495/1712 https://doi.org/10.3389/fonc.2019.00254 |
dc.language.iso.none.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofseries.spa.fl_str_mv |
Frontiers in Oncology, 2234-943X, Vol. 9, Nro, 254, 2019 p. 1-10 |
dc.relation.uri.none.fl_str_mv |
https://www.frontiersin.org/articles/10.3389/fonc.2019.00254/full |
dc.rights.*.fl_str_mv |
Attribution 4.0 International |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by/4.0/ |
dc.rights.local.spa.fl_str_mv |
Acceso abierto |
dc.rights.accessrights.none.fl_str_mv |
http://purl.org/coar/access_right/c_abf104 |
dc.rights.creativecommons.none.fl_str_mv |
2019 |
rights_invalid_str_mv |
Attribution 4.0 International http://creativecommons.org/licenses/by/4.0/ Acceso abierto http://purl.org/coar/access_right/c_abf104 2019 http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Frontiers Media |
dc.publisher.journal.spa.fl_str_mv |
Frontiers in Oncology |
institution |
Universidad El Bosque |
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Corrales, LuisMartín, ClaudioFreitas, HelanoCordeiro de Lima, Vladmir CláudioRodríguez Ariza, July KatherineÁvila Coy, Jenny MireyaBravo, MelissaArchila, PilarCarranza Isaza, HernánVargas Báez, Carlos AlbertoOtero, JorgeBarrón, FelicianoKarachaliou, NikiRosell, RafaelCardona-Mendoza, Andrés FelipeRojas Puentes, LeonardoZatarain Barrón, Zyanya LuciaRuíz-Patiño, AlejandroRicaurte, LuisaArrieta, OscarCardona-Mendoza, Andrés Felipe [0000-0002-6697-5471]Carranza Isaza, Hernán [0000-0002-3593-7405]Vargas Báez, Carlos Alberto [0000-0002-6076-8260]Rojas Puentes, Leonardo [0000-0002-7865-5424]Ruíz-Patiño, Alejandro [0000-0003-1274-9273]Rodríguez Ariza, July Katherine [0000-0003-1168-595X]Ávila Coy, Jenny Mireya [0000-0002-2968-7980]2019-09-16T18:01:13Z2019-09-16T18:01:13Z20192234-943Xhttp://hdl.handle.net/20.500.12495/1712https://doi.org/10.3389/fonc.2019.00254instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengFrontiers MediaFrontiers in OncologyFrontiers in Oncology, 2234-943X, Vol. 9, Nro, 254, 2019 p. 1-10https://www.frontiersin.org/articles/10.3389/fonc.2019.00254/fullAttribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf1042019http://purl.org/coar/access_right/c_abf2Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)articleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Neoplasias pulmonaresVariación genéticaCaracterísticas de la poblaciónSmall-cell lung cancerGenome profileNext-generation sequencingObjectives: Lung cancer is a heterogeneous disease. Presentation and prognosis are known to vary according to several factors, such as genetic and demographic characteristics. Small-cell lung cancer incidence is increasing in never-smokers. However, the disease phenotype in this population is different compared with patients who have a smoking history. Material and Methods: To further investigate the clinical and genetic characteristics of this patient subgroup, a cohort of small cell lung cancer patients was divided into smokers (n = 10) and never/ever-smokers (n = 10). A somatic mutation profile was obtained using a comprehensive NGS assay. Clinical outcomes were compared using the Kaplan-Meier method and Cox proportional models. Results: Median age was 63 years (46–81), 40% were men, and 90% had extended disease. Smoker patients had significantly more cerebral metastases (p = 0.04) and were older (p = 0.03) compared to their non-smoker counterparts. For never/ever smokers, the main genetic mutations were TP53 (80%), RB1 (40%), CYLD (30%), and EGFR (30%). Smoker patients had more RB1 (80%, p = 0.04), CDKN2A (30%, p = 0.05), and CEBPA (30%, p = 0.05) mutations. Response rates to first-line therapy with etoposide plus cisplatin/carboplatin were 50% in smokers and 90% in never/ever smokers (p = 0.141). Median overall survival was significantly longer in never smokers compared with smokers (29.1 months [23.5–34.6] vs. 17.3 months [4.8–29.7]; p = 0.0054). Never/ever smoking history (HR 0.543, 95% CI 0.41–0.80), limited-stage disease (HR 0.56, 95% CI 0.40–0.91) and response to first-line platinum-based chemotherapy (HR 0.63, 95% CI 0.60–0.92) were independently associated with good prognosis. Conclusion: Our data supports that never/ever smoker patients with small-cell lung cancer have better prognosis compared to their smoker counterparts. Further, patients with never/ever smoking history who present with small-cell lung cancer have a different mutation profile compared with smokers, including a high frequency of EGFR, MET, and SMAD4 mutations. Further studies are required to assess whether the differential mutation profile is a consequence of a diverse pathological mechanism for disease onset.ORIGINALCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdfCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdfapplication/pdf2453228https://repositorio.unbosque.edu.co/bitstreams/03a191a1-8300-4ad2-a078-d89569a5eabb/downloadde2aa20ecf8efcc5b7813f357a43171eMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8908https://repositorio.unbosque.edu.co/bitstreams/79c1e5c9-7c15-4731-a6fc-0a8cf295ba2d/download0175ea4a2d4caec4bbcc37e300941108MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/7a72cffa-1580-40d5-88ad-eecbc6d49ae1/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.jpgCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.jpgIM Thumbnailimage/jpeg12666https://repositorio.unbosque.edu.co/bitstreams/5c9ed4d1-3904-4dde-be49-62f2111f07d4/downloade907498c47490f9b154e6c0796a158e4MD54TEXTCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.txtCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.txtExtracted texttext/plain48617https://repositorio.unbosque.edu.co/bitstreams/a9d7300f-695b-4e45-b6ae-e4ef3a5b1ec2/downloadfba435622174a1fd271b557b55a5c878MD5520.500.12495/1712oai:repositorio.unbosque.edu.co:20.500.12495/17122024-02-06 23:29:16.894http://creativecommons.org/licenses/by/4.0/Attribution 4.0 Internationalopen.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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 |