Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)

Objectives: Lung cancer is a heterogeneous disease. Presentation and prognosis are known to vary according to several factors, such as genetic and demographic characteristics. Small-cell lung cancer incidence is increasing in never-smokers. However, the disease phenotype in this population is differ...

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Autores:
Corrales, Luis
Martín, Claudio
Freitas, Helano
Cordeiro de Lima, Vladmir Cláudio
Rodríguez Ariza, July Katherine
Ávila Coy, Jenny Mireya
Bravo, Melissa
Archila, Pilar
Carranza Isaza, Hernán
Vargas Báez, Carlos Alberto
Otero, Jorge
Barrón, Feliciano
Karachaliou, Niki
Rosell, Rafael
Cardona-Mendoza, Andrés Felipe
Rojas Puentes, Leonardo
Zatarain Barrón, Zyanya Lucia
Ruíz-Patiño, Alejandro
Ricaurte, Luisa
Arrieta, Oscar
Tipo de recurso:
Fecha de publicación:
2019
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/1712
Acceso en línea:
http://hdl.handle.net/20.500.12495/1712
https://doi.org/10.3389/fonc.2019.00254
Palabra clave:
Neoplasias pulmonares
Variación genética
Características de la población
Small-cell lung cancer
Genome profile
Next-generation sequencing
Rights
License
Attribution 4.0 International
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network_name_str Repositorio U. El Bosque
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dc.title.spa.fl_str_mv Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
title Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
spellingShingle Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
Neoplasias pulmonares
Variación genética
Características de la población
Small-cell lung cancer
Genome profile
Next-generation sequencing
title_short Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
title_full Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
title_fullStr Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
title_full_unstemmed Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
title_sort Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)
dc.creator.fl_str_mv Corrales, Luis
Martín, Claudio
Freitas, Helano
Cordeiro de Lima, Vladmir Cláudio
Rodríguez Ariza, July Katherine
Ávila Coy, Jenny Mireya
Bravo, Melissa
Archila, Pilar
Carranza Isaza, Hernán
Vargas Báez, Carlos Alberto
Otero, Jorge
Barrón, Feliciano
Karachaliou, Niki
Rosell, Rafael
Cardona-Mendoza, Andrés Felipe
Rojas Puentes, Leonardo
Zatarain Barrón, Zyanya Lucia
Ruíz-Patiño, Alejandro
Ricaurte, Luisa
Arrieta, Oscar
dc.contributor.author.none.fl_str_mv Corrales, Luis
Martín, Claudio
Freitas, Helano
Cordeiro de Lima, Vladmir Cláudio
Rodríguez Ariza, July Katherine
Ávila Coy, Jenny Mireya
Bravo, Melissa
Archila, Pilar
Carranza Isaza, Hernán
Vargas Báez, Carlos Alberto
Otero, Jorge
Barrón, Feliciano
Karachaliou, Niki
Rosell, Rafael
Cardona-Mendoza, Andrés Felipe
Rojas Puentes, Leonardo
Zatarain Barrón, Zyanya Lucia
Ruíz-Patiño, Alejandro
Ricaurte, Luisa
Arrieta, Oscar
dc.contributor.orcid.none.fl_str_mv Cardona-Mendoza, Andrés Felipe [0000-0002-6697-5471]
Carranza Isaza, Hernán [0000-0002-3593-7405]
Vargas Báez, Carlos Alberto [0000-0002-6076-8260]
Rojas Puentes, Leonardo [0000-0002-7865-5424]
Ruíz-Patiño, Alejandro [0000-0003-1274-9273]
Rodríguez Ariza, July Katherine [0000-0003-1168-595X]
Ávila Coy, Jenny Mireya [0000-0002-2968-7980]
dc.subject.decs.spa.fl_str_mv Neoplasias pulmonares
Variación genética
Características de la población
topic Neoplasias pulmonares
Variación genética
Características de la población
Small-cell lung cancer
Genome profile
Next-generation sequencing
dc.subject.keywords.spa.fl_str_mv Small-cell lung cancer
Genome profile
Next-generation sequencing
description Objectives: Lung cancer is a heterogeneous disease. Presentation and prognosis are known to vary according to several factors, such as genetic and demographic characteristics. Small-cell lung cancer incidence is increasing in never-smokers. However, the disease phenotype in this population is different compared with patients who have a smoking history. Material and Methods: To further investigate the clinical and genetic characteristics of this patient subgroup, a cohort of small cell lung cancer patients was divided into smokers (n = 10) and never/ever-smokers (n = 10). A somatic mutation profile was obtained using a comprehensive NGS assay. Clinical outcomes were compared using the Kaplan-Meier method and Cox proportional models. Results: Median age was 63 years (46–81), 40% were men, and 90% had extended disease. Smoker patients had significantly more cerebral metastases (p = 0.04) and were older (p = 0.03) compared to their non-smoker counterparts. For never/ever smokers, the main genetic mutations were TP53 (80%), RB1 (40%), CYLD (30%), and EGFR (30%). Smoker patients had more RB1 (80%, p = 0.04), CDKN2A (30%, p = 0.05), and CEBPA (30%, p = 0.05) mutations. Response rates to first-line therapy with etoposide plus cisplatin/carboplatin were 50% in smokers and 90% in never/ever smokers (p = 0.141). Median overall survival was significantly longer in never smokers compared with smokers (29.1 months [23.5–34.6] vs. 17.3 months [4.8–29.7]; p = 0.0054). Never/ever smoking history (HR 0.543, 95% CI 0.41–0.80), limited-stage disease (HR 0.56, 95% CI 0.40–0.91) and response to first-line platinum-based chemotherapy (HR 0.63, 95% CI 0.60–0.92) were independently associated with good prognosis. Conclusion: Our data supports that never/ever smoker patients with small-cell lung cancer have better prognosis compared to their smoker counterparts. Further, patients with never/ever smoking history who present with small-cell lung cancer have a different mutation profile compared with smokers, including a high frequency of EGFR, MET, and SMAD4 mutations. Further studies are required to assess whether the differential mutation profile is a consequence of a diverse pathological mechanism for disease onset.
publishDate 2019
dc.date.accessioned.none.fl_str_mv 2019-09-16T18:01:13Z
dc.date.available.none.fl_str_mv 2019-09-16T18:01:13Z
dc.date.issued.none.fl_str_mv 2019
dc.type.spa.fl_str_mv article
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dc.type.local.spa.fl_str_mv artículo
dc.identifier.issn.none.fl_str_mv 2234-943X
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/1712
dc.identifier.doi.none.fl_str_mv https://doi.org/10.3389/fonc.2019.00254
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
dc.identifier.repourl.none.fl_str_mv repourl:https://repositorio.unbosque.edu.co
identifier_str_mv 2234-943X
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
repourl:https://repositorio.unbosque.edu.co
url http://hdl.handle.net/20.500.12495/1712
https://doi.org/10.3389/fonc.2019.00254
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv Frontiers in Oncology, 2234-943X, Vol. 9, Nro, 254, 2019 p. 1-10
dc.relation.uri.none.fl_str_mv https://www.frontiersin.org/articles/10.3389/fonc.2019.00254/full
dc.rights.*.fl_str_mv Attribution 4.0 International
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/4.0/
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf104
dc.rights.creativecommons.none.fl_str_mv 2019
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
Acceso abierto
http://purl.org/coar/access_right/c_abf104
2019
http://purl.org/coar/access_right/c_abf2
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dc.publisher.spa.fl_str_mv Frontiers Media
dc.publisher.journal.spa.fl_str_mv Frontiers in Oncology
institution Universidad El Bosque
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spelling Corrales, LuisMartín, ClaudioFreitas, HelanoCordeiro de Lima, Vladmir CláudioRodríguez Ariza, July KatherineÁvila Coy, Jenny MireyaBravo, MelissaArchila, PilarCarranza Isaza, HernánVargas Báez, Carlos AlbertoOtero, JorgeBarrón, FelicianoKarachaliou, NikiRosell, RafaelCardona-Mendoza, Andrés FelipeRojas Puentes, LeonardoZatarain Barrón, Zyanya LuciaRuíz-Patiño, AlejandroRicaurte, LuisaArrieta, OscarCardona-Mendoza, Andrés Felipe [0000-0002-6697-5471]Carranza Isaza, Hernán [0000-0002-3593-7405]Vargas Báez, Carlos Alberto [0000-0002-6076-8260]Rojas Puentes, Leonardo [0000-0002-7865-5424]Ruíz-Patiño, Alejandro [0000-0003-1274-9273]Rodríguez Ariza, July Katherine [0000-0003-1168-595X]Ávila Coy, Jenny Mireya [0000-0002-2968-7980]2019-09-16T18:01:13Z2019-09-16T18:01:13Z20192234-943Xhttp://hdl.handle.net/20.500.12495/1712https://doi.org/10.3389/fonc.2019.00254instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengFrontiers MediaFrontiers in OncologyFrontiers in Oncology, 2234-943X, Vol. 9, Nro, 254, 2019 p. 1-10https://www.frontiersin.org/articles/10.3389/fonc.2019.00254/fullAttribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf1042019http://purl.org/coar/access_right/c_abf2Multigene mutation profiling and clinical characteristics of small-cell lung cancer in never-smokers vs. seavy smokers (Geno1.3-CLICaP)articleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Neoplasias pulmonaresVariación genéticaCaracterísticas de la poblaciónSmall-cell lung cancerGenome profileNext-generation sequencingObjectives: Lung cancer is a heterogeneous disease. Presentation and prognosis are known to vary according to several factors, such as genetic and demographic characteristics. Small-cell lung cancer incidence is increasing in never-smokers. However, the disease phenotype in this population is different compared with patients who have a smoking history. Material and Methods: To further investigate the clinical and genetic characteristics of this patient subgroup, a cohort of small cell lung cancer patients was divided into smokers (n = 10) and never/ever-smokers (n = 10). A somatic mutation profile was obtained using a comprehensive NGS assay. Clinical outcomes were compared using the Kaplan-Meier method and Cox proportional models. Results: Median age was 63 years (46–81), 40% were men, and 90% had extended disease. Smoker patients had significantly more cerebral metastases (p = 0.04) and were older (p = 0.03) compared to their non-smoker counterparts. For never/ever smokers, the main genetic mutations were TP53 (80%), RB1 (40%), CYLD (30%), and EGFR (30%). Smoker patients had more RB1 (80%, p = 0.04), CDKN2A (30%, p = 0.05), and CEBPA (30%, p = 0.05) mutations. Response rates to first-line therapy with etoposide plus cisplatin/carboplatin were 50% in smokers and 90% in never/ever smokers (p = 0.141). Median overall survival was significantly longer in never smokers compared with smokers (29.1 months [23.5–34.6] vs. 17.3 months [4.8–29.7]; p = 0.0054). Never/ever smoking history (HR 0.543, 95% CI 0.41–0.80), limited-stage disease (HR 0.56, 95% CI 0.40–0.91) and response to first-line platinum-based chemotherapy (HR 0.63, 95% CI 0.60–0.92) were independently associated with good prognosis. Conclusion: Our data supports that never/ever smoker patients with small-cell lung cancer have better prognosis compared to their smoker counterparts. Further, patients with never/ever smoking history who present with small-cell lung cancer have a different mutation profile compared with smokers, including a high frequency of EGFR, MET, and SMAD4 mutations. Further studies are required to assess whether the differential mutation profile is a consequence of a diverse pathological mechanism for disease onset.ORIGINALCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdfCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdfapplication/pdf2453228https://repositorio.unbosque.edu.co/bitstreams/03a191a1-8300-4ad2-a078-d89569a5eabb/downloadde2aa20ecf8efcc5b7813f357a43171eMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8908https://repositorio.unbosque.edu.co/bitstreams/79c1e5c9-7c15-4731-a6fc-0a8cf295ba2d/download0175ea4a2d4caec4bbcc37e300941108MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/7a72cffa-1580-40d5-88ad-eecbc6d49ae1/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.jpgCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.jpgIM Thumbnailimage/jpeg12666https://repositorio.unbosque.edu.co/bitstreams/5c9ed4d1-3904-4dde-be49-62f2111f07d4/downloade907498c47490f9b154e6c0796a158e4MD54TEXTCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.txtCardona A.F., Rojas L., Zatarain-Barrón Z.L., Ruiz-Patiño A., Ricaurte L., Corrales L_2019.pdf.txtExtracted texttext/plain48617https://repositorio.unbosque.edu.co/bitstreams/a9d7300f-695b-4e45-b6ae-e4ef3a5b1ec2/downloadfba435622174a1fd271b557b55a5c878MD5520.500.12495/1712oai:repositorio.unbosque.edu.co:20.500.12495/17122024-02-06 23:29:16.894http://creativecommons.org/licenses/by/4.0/Attribution 4.0 Internationalopen.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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