Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs

Daptomycin (DAP) is a lipopeptide antibiotic frequently used as a "last-resort" antibiotic against vancomycin-resistant Enterococcus faecium (VRE). However, an important limitation for DAP therapy against VRE is the emergence of resistance during therapy. Mutations in regulatory systems in...

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Autores:
Diaz, Lorena
Tran, Truc T
Munita, Jose M
Miller, William R
Rincon Núñez, Sandra
Carvajal Ortiz, Lina Paola
Wollam, Aye
Reyes, Jinnethe
Panesso, Diana
Rojas, Natalia L
Shamoo, Yousif
Murray, Barbara E
Weinstock, George M
Arias, Cesar A
Tipo de recurso:
Article of journal
Fecha de publicación:
2014
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/3553
Acceso en línea:
http://hdl.handle.net/20.500.12495/3553
https://doi.org/10.1128/aac.02686-14
https://repositorio.unbosque.edu.co
Palabra clave:
Enterococcus faecium
Daptomicina
Vancomicina
Rights
openAccess
License
Acceso abierto
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dc.title.spa.fl_str_mv Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
dc.title.translated.spa.fl_str_mv Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
title Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
spellingShingle Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
Enterococcus faecium
Daptomicina
Vancomicina
title_short Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
title_full Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
title_fullStr Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
title_full_unstemmed Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
title_sort Whole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICs
dc.creator.fl_str_mv Diaz, Lorena
Tran, Truc T
Munita, Jose M
Miller, William R
Rincon Núñez, Sandra
Carvajal Ortiz, Lina Paola
Wollam, Aye
Reyes, Jinnethe
Panesso, Diana
Rojas, Natalia L
Shamoo, Yousif
Murray, Barbara E
Weinstock, George M
Arias, Cesar A
dc.contributor.author.none.fl_str_mv Diaz, Lorena
Tran, Truc T
Munita, Jose M
Miller, William R
Rincon Núñez, Sandra
Carvajal Ortiz, Lina Paola
Wollam, Aye
Reyes, Jinnethe
Panesso, Diana
Rojas, Natalia L
Shamoo, Yousif
Murray, Barbara E
Weinstock, George M
Arias, Cesar A
dc.contributor.orcid.none.fl_str_mv Panesso, Diana [0000-0002-4049-9702]
Rincon Núñez, Sandra [0000-0002-8482-4554]
Carvajal Ortiz, Lina Paola [0000-0001-8301-8836]
dc.subject.decs.spa.fl_str_mv Enterococcus faecium
Daptomicina
Vancomicina
topic Enterococcus faecium
Daptomicina
Vancomicina
description Daptomycin (DAP) is a lipopeptide antibiotic frequently used as a "last-resort" antibiotic against vancomycin-resistant Enterococcus faecium (VRE). However, an important limitation for DAP therapy against VRE is the emergence of resistance during therapy. Mutations in regulatory systems involved in cell envelope homeostasis are postulated to be important mediators of DAP resistance in E. faecium. Thus, in order to gain insights into the genetic bases of DAP resistance in E. faecium, we investigated the presence of changes in 43 predicted proteins previously associated with DAP resistance in enterococci and staphylococci using the genomes of 19 E. faecium with different DAP MICs (range, 3 to 48 μg/ml). Bodipy-DAP (BDP-DAP) binding to the cell membrane assays and time-kill curves (DAP alone and with ampicillin) were performed. Genetic changes involving two major pathways were identified: (i) LiaFSR, a regulatory system associated with the cell envelope stress response, and (ii) YycFGHIJ, a system involved in the regulation of cell wall homeostasis. Thr120 → Ala and Trp73 → Cys substitutions in LiaS and LiaR, respectively, were the most common changes identified. DAP bactericidal activity was abolished in the presence of liaFSR or yycFGHIJ mutations regardless of the DAP MIC and was restored in the presence of ampicillin, but only in representatives of the LiaFSR pathway. Reduced binding of BDP-DAP to the cell surface was the predominant finding correlating with resistance in isolates with DAP MICs above the susceptibility breakpoint. Our findings suggest that genotypic information may be crucial to predict response to DAP plus β-lactam combinations and continue to question the DAP breakpoint of 4 μg/ml.
publishDate 2014
dc.date.issued.none.fl_str_mv 2014
dc.date.accessioned.none.fl_str_mv 2020-07-17T17:29:42Z
dc.date.available.none.fl_str_mv 2020-07-17T17:29:42Z
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dc.type.local.none.fl_str_mv Artículo de revista
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dc.identifier.issn.none.fl_str_mv 1098-6596
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dc.identifier.doi.none.fl_str_mv https://doi.org/10.1128/aac.02686-14
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
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identifier_str_mv 1098-6596
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
url http://hdl.handle.net/20.500.12495/3553
https://doi.org/10.1128/aac.02686-14
https://repositorio.unbosque.edu.co
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv Antimicrobial Agents and Chemotherapy, 1098-6596, Vol. 58, No. 8, 2014 p. 4527-4534
dc.relation.uri.none.fl_str_mv https://aac.asm.org/content/58/8/4527.long
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf2
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rights_invalid_str_mv Acceso abierto
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2014-08
eu_rights_str_mv openAccess
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dc.publisher.spa.fl_str_mv American Society for Microbiology
dc.publisher.journal.spa.fl_str_mv Antimicrobial Agents and Chemotherapy
institution Universidad El Bosque
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spelling Diaz, LorenaTran, Truc TMunita, Jose MMiller, William RRincon Núñez, SandraCarvajal Ortiz, Lina PaolaWollam, AyeReyes, JinnethePanesso, DianaRojas, Natalia LShamoo, YousifMurray, Barbara EWeinstock, George MArias, Cesar APanesso, Diana [0000-0002-4049-9702]Rincon Núñez, Sandra [0000-0002-8482-4554]Carvajal Ortiz, Lina Paola [0000-0001-8301-8836]2020-07-17T17:29:42Z2020-07-17T17:29:42Z20141098-6596http://hdl.handle.net/20.500.12495/3553https://doi.org/10.1128/aac.02686-14instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquehttps://repositorio.unbosque.edu.coapplication/pdfengAmerican Society for MicrobiologyAntimicrobial Agents and ChemotherapyAntimicrobial Agents and Chemotherapy, 1098-6596, Vol. 58, No. 8, 2014 p. 4527-4534https://aac.asm.org/content/58/8/4527.longWhole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICsWhole-genome analyses of enterococcus faecium isolates with diverse daptomycin MICsArtículo de revistahttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/articlehttp://purl.org/coar/version/c_970fb48d4fbd8a85Enterococcus faeciumDaptomicinaVancomicinaDaptomycin (DAP) is a lipopeptide antibiotic frequently used as a "last-resort" antibiotic against vancomycin-resistant Enterococcus faecium (VRE). However, an important limitation for DAP therapy against VRE is the emergence of resistance during therapy. Mutations in regulatory systems involved in cell envelope homeostasis are postulated to be important mediators of DAP resistance in E. faecium. Thus, in order to gain insights into the genetic bases of DAP resistance in E. faecium, we investigated the presence of changes in 43 predicted proteins previously associated with DAP resistance in enterococci and staphylococci using the genomes of 19 E. faecium with different DAP MICs (range, 3 to 48 μg/ml). Bodipy-DAP (BDP-DAP) binding to the cell membrane assays and time-kill curves (DAP alone and with ampicillin) were performed. Genetic changes involving two major pathways were identified: (i) LiaFSR, a regulatory system associated with the cell envelope stress response, and (ii) YycFGHIJ, a system involved in the regulation of cell wall homeostasis. Thr120 → Ala and Trp73 → Cys substitutions in LiaS and LiaR, respectively, were the most common changes identified. DAP bactericidal activity was abolished in the presence of liaFSR or yycFGHIJ mutations regardless of the DAP MIC and was restored in the presence of ampicillin, but only in representatives of the LiaFSR pathway. Reduced binding of BDP-DAP to the cell surface was the predominant finding correlating with resistance in isolates with DAP MICs above the susceptibility breakpoint. Our findings suggest that genotypic information may be crucial to predict response to DAP plus β-lactam combinations and continue to question the DAP breakpoint of 4 μg/ml.Acceso abiertohttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessAcceso abierto2014-08THUMBNAILDiaz_Lorena_2014.pdf.jpgDiaz_Lorena_2014.pdf.jpgIM Thumbnailimage/jpeg10181https://repositorio.unbosque.edu.co/bitstreams/d80311a0-ff8e-4e7e-aa70-d643d75c05a1/downloadfd705a25b58264efc8af33aad9e5d961MD53ORIGINALDiaz_Lorena_2014.pdfDiaz_Lorena_2014.pdfapplication/pdf1171244https://repositorio.unbosque.edu.co/bitstreams/6ac16dcf-9864-4dbe-9ce9-87884bc73986/downloadc7dc23de6b90fd9c2eb774bf30bc9d61MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/92e509a9-4b0f-415c-bf08-60f9e612eb82/download8a4605be74aa9ea9d79846c1fba20a33MD52TEXTDiaz_Lorena_2014.pdf.txtDiaz_Lorena_2014.pdf.txtExtracted texttext/plain50314https://repositorio.unbosque.edu.co/bitstreams/d13c63b0-8160-4ec1-9230-94f2e4b1f3f3/downloadf3686d1fed5b4b0e3012c151b8c7e30dMD5420.500.12495/3553oai:repositorio.unbosque.edu.co:20.500.12495/35532024-02-07 13:19:33.255open.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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