Analysis of DNA repair gene polymorphisms in glioblastoma

Background: Glioblastoma is the most common and aggressive primary brain tumor in adults. Despite several factors such as ionizing radiation exposure or rare genetic syndromes have been associated with the development of glioblastoma, no underlying cause has been identified for the majority of cases...

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Autores:
Rodriguez Hernandez, Irene
Perdomo Lara, Sandra Janneth
Santos Briz, Angel
Garcia, Juan Luis
Gomez Moreta, Juan Antonio
Cruz, Juan Jesus
Gonzalez Sarmiento, Rogelio
Tipo de recurso:
Article of journal
Fecha de publicación:
2014
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/3345
Acceso en línea:
http://hdl.handle.net/20.500.12495/3345
https://doi.org/10.1016/j.gene.2013.11.077
https://repositorio.unbosque.edu.co
Palabra clave:
Glioblastoma
Polimorfismo genético
Ácido desoxirribonucleico
Glioblastoma
Polymorphism
Repair
ERCC1
MLH1
Rights
openAccess
License
Acceso abierto
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oai_identifier_str oai:repositorio.unbosque.edu.co:20.500.12495/3345
network_acronym_str UNBOSQUE2
network_name_str Repositorio U. El Bosque
repository_id_str
dc.title.spa.fl_str_mv Analysis of DNA repair gene polymorphisms in glioblastoma
title Analysis of DNA repair gene polymorphisms in glioblastoma
spellingShingle Analysis of DNA repair gene polymorphisms in glioblastoma
Glioblastoma
Polimorfismo genético
Ácido desoxirribonucleico
Glioblastoma
Polymorphism
Repair
ERCC1
MLH1
title_short Analysis of DNA repair gene polymorphisms in glioblastoma
title_full Analysis of DNA repair gene polymorphisms in glioblastoma
title_fullStr Analysis of DNA repair gene polymorphisms in glioblastoma
title_full_unstemmed Analysis of DNA repair gene polymorphisms in glioblastoma
title_sort Analysis of DNA repair gene polymorphisms in glioblastoma
dc.creator.fl_str_mv Rodriguez Hernandez, Irene
Perdomo Lara, Sandra Janneth
Santos Briz, Angel
Garcia, Juan Luis
Gomez Moreta, Juan Antonio
Cruz, Juan Jesus
Gonzalez Sarmiento, Rogelio
dc.contributor.author.none.fl_str_mv Rodriguez Hernandez, Irene
Perdomo Lara, Sandra Janneth
Santos Briz, Angel
Garcia, Juan Luis
Gomez Moreta, Juan Antonio
Cruz, Juan Jesus
Gonzalez Sarmiento, Rogelio
dc.contributor.orcid.none.fl_str_mv Perdomo Lara, Sandra Janneth [0000-0002-4429-3760]
dc.subject.decs.spa.fl_str_mv Glioblastoma
Polimorfismo genético
Ácido desoxirribonucleico
topic Glioblastoma
Polimorfismo genético
Ácido desoxirribonucleico
Glioblastoma
Polymorphism
Repair
ERCC1
MLH1
dc.subject.keywords.spa.fl_str_mv Glioblastoma
Polymorphism
Repair
ERCC1
MLH1
description Background: Glioblastoma is the most common and aggressive primary brain tumor in adults. Despite several factors such as ionizing radiation exposure or rare genetic syndromes have been associated with the development of glioblastoma, no underlying cause has been identified for the majority of cases. We thus aimed to investigate the role of DNA repair polymorphisms in modulating glioblastoma risk. Methods: Genotypic and allelic frequencies of seven common polymorphisms in DNA repair genes involved in nucleotide excision repair (ERCC1 rs11615, ERCC2 rs13181, ERCC6 rs4253079), base excision repair (APEX1 rs1130409, XRCC1 rs25487), double-strand break repair (XRCC3 rs861539) and mismatch repair (MLH1 rs1800734) pathways were analyzed in 115 glioblastoma patients and 200 healthy controls. Haplotype analysis was also performed for ERCC1 rs11615 and ERCC2 rs13181 polymorphisms, located on the same chromosomal region (19q13.32). Results: Our results indicated that carriers of the ERCC2 Gln/Gln genotype were associated with a lower glioblastoma risk (OR = 0.32, 95% CI 0.12–0.89; P = 0.028), whereas carriers of the MLH1 AA genotype were associated with an increased risk of glioblastoma (OR = 3.14, 95% CI 1.09–9.06; P = 0.034). Furthermore, the haplotype containing the C allele of ERCC2 rs13181 polymorphism and the T allele of ERCC1 rs11615 polymorphism was significantly associated with a protective effect of developing glioblastoma (OR = 0.34, 95% CI 0.16–0.71; P = 0.004). Conclusions: These results pointed out that MLH1 rs1800734 and ERCC2 rs13181 polymorphisms might constitute glioblastoma susceptibility factors, and also suggested that the chromosomal region 19q could be important in glioblastoma pathogenesis.
publishDate 2014
dc.date.issued.none.fl_str_mv 2014
dc.date.accessioned.none.fl_str_mv 2020-07-07T16:30:00Z
dc.date.available.none.fl_str_mv 2020-07-07T16:30:00Z
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dc.type.local.none.fl_str_mv Artículo de revista
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dc.identifier.issn.none.fl_str_mv 0378-1119
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/3345
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.gene.2013.11.077
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
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identifier_str_mv 0378-1119
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
url http://hdl.handle.net/20.500.12495/3345
https://doi.org/10.1016/j.gene.2013.11.077
https://repositorio.unbosque.edu.co
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv Gene, 0378-1119, Vol. 536, Nro. 1, 2014, p. 79-83
dc.relation.uri.none.fl_str_mv https://www.sciencedirect.com/science/article/abs/pii/S037811191301603X?via%3Dihub
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf2
info:eu-repo/semantics/openAccess
Acceso abierto
dc.rights.creativecommons.none.fl_str_mv 2013
rights_invalid_str_mv Acceso abierto
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2013
eu_rights_str_mv openAccess
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Elsevier
dc.publisher.journal.spa.fl_str_mv Gene
institution Universidad El Bosque
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spelling Rodriguez Hernandez, IrenePerdomo Lara, Sandra JannethSantos Briz, AngelGarcia, Juan LuisGomez Moreta, Juan AntonioCruz, Juan JesusGonzalez Sarmiento, RogelioPerdomo Lara, Sandra Janneth [0000-0002-4429-3760]2020-07-07T16:30:00Z2020-07-07T16:30:00Z20140378-1119http://hdl.handle.net/20.500.12495/3345https://doi.org/10.1016/j.gene.2013.11.077instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquehttps://repositorio.unbosque.edu.coapplication/pdfengElsevierGeneGene, 0378-1119, Vol. 536, Nro. 1, 2014, p. 79-83https://www.sciencedirect.com/science/article/abs/pii/S037811191301603X?via%3DihubAnalysis of DNA repair gene polymorphisms in glioblastomaArtículo de revistahttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/articlehttp://purl.org/coar/version/c_970fb48d4fbd8a85GlioblastomaPolimorfismo genéticoÁcido desoxirribonucleicoGlioblastomaPolymorphismRepairERCC1MLH1Background: Glioblastoma is the most common and aggressive primary brain tumor in adults. Despite several factors such as ionizing radiation exposure or rare genetic syndromes have been associated with the development of glioblastoma, no underlying cause has been identified for the majority of cases. We thus aimed to investigate the role of DNA repair polymorphisms in modulating glioblastoma risk. Methods: Genotypic and allelic frequencies of seven common polymorphisms in DNA repair genes involved in nucleotide excision repair (ERCC1 rs11615, ERCC2 rs13181, ERCC6 rs4253079), base excision repair (APEX1 rs1130409, XRCC1 rs25487), double-strand break repair (XRCC3 rs861539) and mismatch repair (MLH1 rs1800734) pathways were analyzed in 115 glioblastoma patients and 200 healthy controls. Haplotype analysis was also performed for ERCC1 rs11615 and ERCC2 rs13181 polymorphisms, located on the same chromosomal region (19q13.32). Results: Our results indicated that carriers of the ERCC2 Gln/Gln genotype were associated with a lower glioblastoma risk (OR = 0.32, 95% CI 0.12–0.89; P = 0.028), whereas carriers of the MLH1 AA genotype were associated with an increased risk of glioblastoma (OR = 3.14, 95% CI 1.09–9.06; P = 0.034). Furthermore, the haplotype containing the C allele of ERCC2 rs13181 polymorphism and the T allele of ERCC1 rs11615 polymorphism was significantly associated with a protective effect of developing glioblastoma (OR = 0.34, 95% CI 0.16–0.71; P = 0.004). Conclusions: These results pointed out that MLH1 rs1800734 and ERCC2 rs13181 polymorphisms might constitute glioblastoma susceptibility factors, and also suggested that the chromosomal region 19q could be important in glioblastoma pathogenesis.Acceso abiertohttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessAcceso abierto2013ORIGINALRodriguez_Hernandez_Irene_2013.pdfRodriguez_Hernandez_Irene_2013.pdfapplication/pdf175311https://repositorio.unbosque.edu.co/bitstreams/aecf46b6-cf81-46cd-8ca2-9a48871b5ba4/download8b1c40b0c01ae73e7d31f3a01412d94cMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/a6bad187-7c44-4417-b157-fe09dd6d35e3/download8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILRodriguez_Hernandez_Irene_2013.pdf.jpgRodriguez_Hernandez_Irene_2013.pdf.jpgIM Thumbnailimage/jpeg12253https://repositorio.unbosque.edu.co/bitstreams/8ed7792e-6fb7-410f-be44-664f59eedd1f/download54f19110c1be35e9e1adbab7213fffb1MD53TEXTRodriguez_Hernandez_Irene_2013.pdf.txtRodriguez_Hernandez_Irene_2013.pdf.txtExtracted texttext/plain40154https://repositorio.unbosque.edu.co/bitstreams/218d8a20-7b71-4b11-a9c0-15c11a9bc2a3/download1c6be941d80c47233b6604df57c483a1MD5420.500.12495/3345oai:repositorio.unbosque.edu.co:20.500.12495/33452024-02-07 01:58:18.361restrictedhttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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