HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population

Objective: The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia. Methods: In this case-control study, genomic DNA was isolated and puri...

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Autores:
Toro, Jaime
Cuellar Giraldo, David
Díaz Cruz, Camilo
Burbano, Lisseth Estefania
Reyes, Saúl
Cárdenas Robledo, Simón
Narváez, Diana M.
Cárdenas, Wilmer
Porras-Ramírez, Alexandra
Lattig, María Claudia
Groot, Helena
Guío, Claudia-Marcela
Cortés Muñoz, Fabián
Tipo de recurso:
Fecha de publicación:
2016
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/1663
Acceso en línea:
http://hdl.handle.net/20.500.12495/1663
https://doi.org/10.1212/NXI.0000000000000192
Palabra clave:
Histocompatibilidad
Esclerosis múltiple
ADN Mitocondrial
Antígenos HLA-DR
Rights
License
Attribution-NonCommercial-NoDerivatives 4.0 International
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oai_identifier_str oai:repositorio.unbosque.edu.co:20.500.12495/1663
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network_name_str Repositorio U. El Bosque
repository_id_str
dc.title.spa.fl_str_mv HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
title HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
spellingShingle HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
Histocompatibilidad
Esclerosis múltiple
ADN Mitocondrial
Antígenos HLA-DR
title_short HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
title_full HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
title_fullStr HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
title_full_unstemmed HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
title_sort HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
dc.creator.fl_str_mv Toro, Jaime
Cuellar Giraldo, David
Díaz Cruz, Camilo
Burbano, Lisseth Estefania
Reyes, Saúl
Cárdenas Robledo, Simón
Narváez, Diana M.
Cárdenas, Wilmer
Porras-Ramírez, Alexandra
Lattig, María Claudia
Groot, Helena
Guío, Claudia-Marcela
Cortés Muñoz, Fabián
dc.contributor.author.none.fl_str_mv Toro, Jaime
Cuellar Giraldo, David
Díaz Cruz, Camilo
Burbano, Lisseth Estefania
Reyes, Saúl
Cárdenas Robledo, Simón
Narváez, Diana M.
Cárdenas, Wilmer
Porras-Ramírez, Alexandra
Lattig, María Claudia
Groot, Helena
Guío, Claudia-Marcela
Cortés Muñoz, Fabián
dc.contributor.orcid.none.fl_str_mv Porras-Ramírez, Alexandra [0000-0002-0800-1388]
Toro, Jaime [0000-0001-7129-0058]
dc.subject.decs.spa.fl_str_mv Histocompatibilidad
Esclerosis múltiple
ADN Mitocondrial
Antígenos HLA-DR
topic Histocompatibilidad
Esclerosis múltiple
ADN Mitocondrial
Antígenos HLA-DR
description Objective: The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia. Methods: In this case-control study, genomic DNA was isolated and purified from blood samples. HLA-DRB1 allele genotyping was done using PCR. Mitochondrial hypervariable region 1 was amplified and haplogroups were determined using HaploGrep software. Genomic ancestry was estimated by genotyping a panel of ancestry informative markers. To test the association of HLA polymorphisms and MS, we ran separate multivariate logistic regression models. Bonferroni correction was used to account for multiple regression tests. Results: A total of 100 patients with MS (mean age 40.4 ± 12 years; 70% females) and 200 healthy controls (mean age 37.6 ± 11 years; 83.5% females) were included in the analysis. Ancestry proportions and haplogroup frequencies did not differ between patients and controls. HLA-DRB1*15 was present in 31% of cases and 13.5% of controls, whereas HLA-DRB1*14 was present in 5% of cases and 15.5% of controls. In the multivariate model, HLA-DRB1*15 was significantly associated with MS (odds ratio [OR] = 3.05, p < 0.001), whereas HLA-DRB1*14 was confirmed as a protective factor in our population (OR = 0.16, p = 0.001). Conclusions: This study provides evidence indicating that HLA-DRB1*15 allele confers susceptibility to MS and HLA-DRB1*14 allele exerts resistance to MS in a highly admixed population. This latter finding could partially explain the low prevalence of MS in Bogotá, Colombia.
publishDate 2016
dc.date.issued.none.fl_str_mv 2016
dc.date.accessioned.none.fl_str_mv 2019-09-06T20:32:55Z
dc.date.available.none.fl_str_mv 2019-09-06T20:32:55Z
dc.type.spa.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.local.spa.fl_str_mv artículo
dc.identifier.issn.none.fl_str_mv 2332-7812
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/1663
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1212/NXI.0000000000000192
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
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identifier_str_mv 2332-7812
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
repourl:https://repositorio.unbosque.edu.co
url http://hdl.handle.net/20.500.12495/1663
https://doi.org/10.1212/NXI.0000000000000192
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv Neurology: Neuroimmunology and NeuroInflammation, 2332-7812 Vol. 3, Nro, 1, 2016
dc.relation.uri.none.fl_str_mv https://nn.neurology.org/content/3/1/e192
dc.rights.*.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
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dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf325
dc.rights.creativecommons.none.fl_str_mv 2016
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
Acceso abierto
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http://purl.org/coar/access_right/c_abf2
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dc.publisher.spa.fl_str_mv Lippincott Williams and Wilkins
dc.publisher.journal.spa.fl_str_mv Neurology: Neuroimmunology and NeuroInflammation
institution Universidad El Bosque
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spelling Toro, JaimeCuellar Giraldo, DavidDíaz Cruz, CamiloBurbano, Lisseth EstefaniaReyes, SaúlCárdenas Robledo, SimónNarváez, Diana M.Cárdenas, WilmerPorras-Ramírez, AlexandraLattig, María ClaudiaGroot, HelenaGuío, Claudia-MarcelaCortés Muñoz, FabiánPorras-Ramírez, Alexandra [0000-0002-0800-1388]Toro, Jaime [0000-0001-7129-0058]2019-09-06T20:32:55Z2019-09-06T20:32:55Z20162332-7812http://hdl.handle.net/20.500.12495/1663https://doi.org/10.1212/NXI.0000000000000192instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengLippincott Williams and WilkinsNeurology: Neuroimmunology and NeuroInflammationNeurology: Neuroimmunology and NeuroInflammation, 2332-7812 Vol. 3, Nro, 1, 2016https://nn.neurology.org/content/3/1/e192Attribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf3252016http://purl.org/coar/access_right/c_abf2HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian populationarticleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501HistocompatibilidadEsclerosis múltipleADN MitocondrialAntígenos HLA-DRObjective: The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia. Methods: In this case-control study, genomic DNA was isolated and purified from blood samples. HLA-DRB1 allele genotyping was done using PCR. Mitochondrial hypervariable region 1 was amplified and haplogroups were determined using HaploGrep software. Genomic ancestry was estimated by genotyping a panel of ancestry informative markers. To test the association of HLA polymorphisms and MS, we ran separate multivariate logistic regression models. Bonferroni correction was used to account for multiple regression tests. Results: A total of 100 patients with MS (mean age 40.4 ± 12 years; 70% females) and 200 healthy controls (mean age 37.6 ± 11 years; 83.5% females) were included in the analysis. Ancestry proportions and haplogroup frequencies did not differ between patients and controls. HLA-DRB1*15 was present in 31% of cases and 13.5% of controls, whereas HLA-DRB1*14 was present in 5% of cases and 15.5% of controls. In the multivariate model, HLA-DRB1*15 was significantly associated with MS (odds ratio [OR] = 3.05, p < 0.001), whereas HLA-DRB1*14 was confirmed as a protective factor in our population (OR = 0.16, p = 0.001). Conclusions: This study provides evidence indicating that HLA-DRB1*15 allele confers susceptibility to MS and HLA-DRB1*14 allele exerts resistance to MS in a highly admixed population. This latter finding could partially explain the low prevalence of MS in Bogotá, Colombia.ORIGINALToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdfToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdfapplication/pdf246965https://repositorio.unbosque.edu.co/bitstreams/6fb9660f-3e2b-4b9b-8439-9cfc117d8947/download3a35a8eeaaf07c7f2b8a3b3db74d3ea3MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805https://repositorio.unbosque.edu.co/bitstreams/429cb72f-bd60-400a-8428-cec148ed902e/download4460e5956bc1d1639be9ae6146a50347MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/d2622341-ffea-4cba-9dd4-95ea8f66e761/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.jpgToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.jpgIM Thumbnailimage/jpeg10292https://repositorio.unbosque.edu.co/bitstreams/57073e1d-66b0-492e-b465-d91be2fdc3fd/downloada14b9ebadb3b6c9c0988156515bcf8f7MD54TEXTToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.txtToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.txtExtracted texttext/plain31209https://repositorio.unbosque.edu.co/bitstreams/252a8bd0-81a7-4e42-9689-dbf4efed15d4/downloadca847a73fe038c9c69bd3007409e4819MD5520.500.12495/1663oai:repositorio.unbosque.edu.co:20.500.12495/16632024-02-07 03:05:29.733http://creativecommons.org/licenses/by-nc-nd/4.0/Attribution-NonCommercial-NoDerivatives 4.0 Internationalopen.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.comTk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=