HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population
Objective: The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia. Methods: In this case-control study, genomic DNA was isolated and puri...
- Autores:
-
Toro, Jaime
Cuellar Giraldo, David
Díaz Cruz, Camilo
Burbano, Lisseth Estefania
Reyes, Saúl
Cárdenas Robledo, Simón
Narváez, Diana M.
Cárdenas, Wilmer
Porras-Ramírez, Alexandra
Lattig, María Claudia
Groot, Helena
Guío, Claudia-Marcela
Cortés Muñoz, Fabián
- Tipo de recurso:
- Fecha de publicación:
- 2016
- Institución:
- Universidad El Bosque
- Repositorio:
- Repositorio U. El Bosque
- Idioma:
- eng
- OAI Identifier:
- oai:repositorio.unbosque.edu.co:20.500.12495/1663
- Acceso en línea:
- http://hdl.handle.net/20.500.12495/1663
https://doi.org/10.1212/NXI.0000000000000192
- Palabra clave:
- Histocompatibilidad
Esclerosis múltiple
ADN Mitocondrial
Antígenos HLA-DR
- Rights
- License
- Attribution-NonCommercial-NoDerivatives 4.0 International
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|
dc.title.spa.fl_str_mv |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
title |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
spellingShingle |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population Histocompatibilidad Esclerosis múltiple ADN Mitocondrial Antígenos HLA-DR |
title_short |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
title_full |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
title_fullStr |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
title_full_unstemmed |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
title_sort |
HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian population |
dc.creator.fl_str_mv |
Toro, Jaime Cuellar Giraldo, David Díaz Cruz, Camilo Burbano, Lisseth Estefania Reyes, Saúl Cárdenas Robledo, Simón Narváez, Diana M. Cárdenas, Wilmer Porras-Ramírez, Alexandra Lattig, María Claudia Groot, Helena Guío, Claudia-Marcela Cortés Muñoz, Fabián |
dc.contributor.author.none.fl_str_mv |
Toro, Jaime Cuellar Giraldo, David Díaz Cruz, Camilo Burbano, Lisseth Estefania Reyes, Saúl Cárdenas Robledo, Simón Narváez, Diana M. Cárdenas, Wilmer Porras-Ramírez, Alexandra Lattig, María Claudia Groot, Helena Guío, Claudia-Marcela Cortés Muñoz, Fabián |
dc.contributor.orcid.none.fl_str_mv |
Porras-Ramírez, Alexandra [0000-0002-0800-1388] Toro, Jaime [0000-0001-7129-0058] |
dc.subject.decs.spa.fl_str_mv |
Histocompatibilidad Esclerosis múltiple ADN Mitocondrial Antígenos HLA-DR |
topic |
Histocompatibilidad Esclerosis múltiple ADN Mitocondrial Antígenos HLA-DR |
description |
Objective: The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia. Methods: In this case-control study, genomic DNA was isolated and purified from blood samples. HLA-DRB1 allele genotyping was done using PCR. Mitochondrial hypervariable region 1 was amplified and haplogroups were determined using HaploGrep software. Genomic ancestry was estimated by genotyping a panel of ancestry informative markers. To test the association of HLA polymorphisms and MS, we ran separate multivariate logistic regression models. Bonferroni correction was used to account for multiple regression tests. Results: A total of 100 patients with MS (mean age 40.4 ± 12 years; 70% females) and 200 healthy controls (mean age 37.6 ± 11 years; 83.5% females) were included in the analysis. Ancestry proportions and haplogroup frequencies did not differ between patients and controls. HLA-DRB1*15 was present in 31% of cases and 13.5% of controls, whereas HLA-DRB1*14 was present in 5% of cases and 15.5% of controls. In the multivariate model, HLA-DRB1*15 was significantly associated with MS (odds ratio [OR] = 3.05, p < 0.001), whereas HLA-DRB1*14 was confirmed as a protective factor in our population (OR = 0.16, p = 0.001). Conclusions: This study provides evidence indicating that HLA-DRB1*15 allele confers susceptibility to MS and HLA-DRB1*14 allele exerts resistance to MS in a highly admixed population. This latter finding could partially explain the low prevalence of MS in Bogotá, Colombia. |
publishDate |
2016 |
dc.date.issued.none.fl_str_mv |
2016 |
dc.date.accessioned.none.fl_str_mv |
2019-09-06T20:32:55Z |
dc.date.available.none.fl_str_mv |
2019-09-06T20:32:55Z |
dc.type.spa.fl_str_mv |
article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.local.spa.fl_str_mv |
artículo |
dc.identifier.issn.none.fl_str_mv |
2332-7812 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/20.500.12495/1663 |
dc.identifier.doi.none.fl_str_mv |
https://doi.org/10.1212/NXI.0000000000000192 |
dc.identifier.instname.spa.fl_str_mv |
instname:Universidad El Bosque |
dc.identifier.reponame.spa.fl_str_mv |
reponame:Repositorio Institucional Universidad El Bosque |
dc.identifier.repourl.none.fl_str_mv |
repourl:https://repositorio.unbosque.edu.co |
identifier_str_mv |
2332-7812 instname:Universidad El Bosque reponame:Repositorio Institucional Universidad El Bosque repourl:https://repositorio.unbosque.edu.co |
url |
http://hdl.handle.net/20.500.12495/1663 https://doi.org/10.1212/NXI.0000000000000192 |
dc.language.iso.none.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofseries.spa.fl_str_mv |
Neurology: Neuroimmunology and NeuroInflammation, 2332-7812 Vol. 3, Nro, 1, 2016 |
dc.relation.uri.none.fl_str_mv |
https://nn.neurology.org/content/3/1/e192 |
dc.rights.*.fl_str_mv |
Attribution-NonCommercial-NoDerivatives 4.0 International |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
dc.rights.local.spa.fl_str_mv |
Acceso abierto |
dc.rights.accessrights.none.fl_str_mv |
http://purl.org/coar/access_right/c_abf325 |
dc.rights.creativecommons.none.fl_str_mv |
2016 |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ Acceso abierto http://purl.org/coar/access_right/c_abf325 2016 http://purl.org/coar/access_right/c_abf2 |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Lippincott Williams and Wilkins |
dc.publisher.journal.spa.fl_str_mv |
Neurology: Neuroimmunology and NeuroInflammation |
institution |
Universidad El Bosque |
bitstream.url.fl_str_mv |
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Toro, JaimeCuellar Giraldo, DavidDíaz Cruz, CamiloBurbano, Lisseth EstefaniaReyes, SaúlCárdenas Robledo, SimónNarváez, Diana M.Cárdenas, WilmerPorras-Ramírez, AlexandraLattig, María ClaudiaGroot, HelenaGuío, Claudia-MarcelaCortés Muñoz, FabiánPorras-Ramírez, Alexandra [0000-0002-0800-1388]Toro, Jaime [0000-0001-7129-0058]2019-09-06T20:32:55Z2019-09-06T20:32:55Z20162332-7812http://hdl.handle.net/20.500.12495/1663https://doi.org/10.1212/NXI.0000000000000192instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengLippincott Williams and WilkinsNeurology: Neuroimmunology and NeuroInflammationNeurology: Neuroimmunology and NeuroInflammation, 2332-7812 Vol. 3, Nro, 1, 2016https://nn.neurology.org/content/3/1/e192Attribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf3252016http://purl.org/coar/access_right/c_abf2HLA-DRB1*14 is a protective allele for multiple sclerosis in an admixed Colombian populationarticleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501HistocompatibilidadEsclerosis múltipleADN MitocondrialAntígenos HLA-DRObjective: The aim of this study was to determine ancestry informative markers, mitochondrial DNA haplogroups, and the association between HLA-DRB1 alleles and multiple sclerosis (MS) in a group of patients from Bogotá, Colombia. Methods: In this case-control study, genomic DNA was isolated and purified from blood samples. HLA-DRB1 allele genotyping was done using PCR. Mitochondrial hypervariable region 1 was amplified and haplogroups were determined using HaploGrep software. Genomic ancestry was estimated by genotyping a panel of ancestry informative markers. To test the association of HLA polymorphisms and MS, we ran separate multivariate logistic regression models. Bonferroni correction was used to account for multiple regression tests. Results: A total of 100 patients with MS (mean age 40.4 ± 12 years; 70% females) and 200 healthy controls (mean age 37.6 ± 11 years; 83.5% females) were included in the analysis. Ancestry proportions and haplogroup frequencies did not differ between patients and controls. HLA-DRB1*15 was present in 31% of cases and 13.5% of controls, whereas HLA-DRB1*14 was present in 5% of cases and 15.5% of controls. In the multivariate model, HLA-DRB1*15 was significantly associated with MS (odds ratio [OR] = 3.05, p < 0.001), whereas HLA-DRB1*14 was confirmed as a protective factor in our population (OR = 0.16, p = 0.001). Conclusions: This study provides evidence indicating that HLA-DRB1*15 allele confers susceptibility to MS and HLA-DRB1*14 allele exerts resistance to MS in a highly admixed population. This latter finding could partially explain the low prevalence of MS in Bogotá, Colombia.ORIGINALToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdfToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdfapplication/pdf246965https://repositorio.unbosque.edu.co/bitstreams/6fb9660f-3e2b-4b9b-8439-9cfc117d8947/download3a35a8eeaaf07c7f2b8a3b3db74d3ea3MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805https://repositorio.unbosque.edu.co/bitstreams/429cb72f-bd60-400a-8428-cec148ed902e/download4460e5956bc1d1639be9ae6146a50347MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/d2622341-ffea-4cba-9dd4-95ea8f66e761/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.jpgToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.jpgIM Thumbnailimage/jpeg10292https://repositorio.unbosque.edu.co/bitstreams/57073e1d-66b0-492e-b465-d91be2fdc3fd/downloada14b9ebadb3b6c9c0988156515bcf8f7MD54TEXTToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.txtToro J., Cuellar-Giraldo D., Díaz-Cruz C., Burbano L.-E., Guío C.-M., Reyes S._2016.pdf.txtExtracted texttext/plain31209https://repositorio.unbosque.edu.co/bitstreams/252a8bd0-81a7-4e42-9689-dbf4efed15d4/downloadca847a73fe038c9c69bd3007409e4819MD5520.500.12495/1663oai:repositorio.unbosque.edu.co:20.500.12495/16632024-02-07 03:05:29.733http://creativecommons.org/licenses/by-nc-nd/4.0/Attribution-NonCommercial-NoDerivatives 4.0 Internationalopen.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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 |