An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016

Background Enterococcus faecium is ranked worldwide as one of the top ten pathogens identified in healthcare-associated infections (HAI) and is classified as one of the high priority pathogens for research and development of new antibiotics worldwide. Due to molecular biology techniques’ higher cost...

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Autores:
Corredor, Nancy Carolina
López, Carolina
Aguilera, Paula Andrea
Rodríguez-Leguizamón, Giovanni
Leal, Aura Lucía
Ovalle-Guerro, María Victoria
Pardo-Oviedo, Juan Mauricio
Patarroyo, Manuel Alfonso
Prieto, Lina María
Chica, Claudia Elena
Tipo de recurso:
Fecha de publicación:
2019
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/1569
Acceso en línea:
http://hdl.handle.net/20.500.12495/1569
https://doi.org/10.1186/s12879-019-3877-7
Palabra clave:
Enterococcus faecium resistente a la vancomicina
Vigilancia de brotes
Resistencia antimicrobiana
Resistencia a la vancomicina
Brotes de enfermedades
Virología
Vancomycin-resistant Enterococcus faecium
Outbreak surveillance
Antimicrobial resistance
Rights
License
Attribution 4.0 International
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dc.title.spa.fl_str_mv An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
title An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
spellingShingle An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
Enterococcus faecium resistente a la vancomicina
Vigilancia de brotes
Resistencia antimicrobiana
Resistencia a la vancomicina
Brotes de enfermedades
Virología
Vancomycin-resistant Enterococcus faecium
Outbreak surveillance
Antimicrobial resistance
title_short An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
title_full An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
title_fullStr An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
title_full_unstemmed An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
title_sort An epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016
dc.creator.fl_str_mv Corredor, Nancy Carolina
López, Carolina
Aguilera, Paula Andrea
Rodríguez-Leguizamón, Giovanni
Leal, Aura Lucía
Ovalle-Guerro, María Victoria
Pardo-Oviedo, Juan Mauricio
Patarroyo, Manuel Alfonso
Prieto, Lina María
Chica, Claudia Elena
dc.contributor.author.none.fl_str_mv Corredor, Nancy Carolina
López, Carolina
Aguilera, Paula Andrea
Rodríguez-Leguizamón, Giovanni
Leal, Aura Lucía
Ovalle-Guerro, María Victoria
Pardo-Oviedo, Juan Mauricio
Patarroyo, Manuel Alfonso
Prieto, Lina María
Chica, Claudia Elena
dc.subject.spa.fl_str_mv Enterococcus faecium resistente a la vancomicina
Vigilancia de brotes
Resistencia antimicrobiana
topic Enterococcus faecium resistente a la vancomicina
Vigilancia de brotes
Resistencia antimicrobiana
Resistencia a la vancomicina
Brotes de enfermedades
Virología
Vancomycin-resistant Enterococcus faecium
Outbreak surveillance
Antimicrobial resistance
dc.subject.decs.spa.fl_str_mv Resistencia a la vancomicina
Brotes de enfermedades
Virología
dc.subject.keywords.spa.fl_str_mv Vancomycin-resistant Enterococcus faecium
Outbreak surveillance
Antimicrobial resistance
description Background Enterococcus faecium is ranked worldwide as one of the top ten pathogens identified in healthcare-associated infections (HAI) and is classified as one of the high priority pathogens for research and development of new antibiotics worldwide. Due to molecular biology techniques’ higher costs, the approach for identifying and controlling infectious diseases in developing countries has been based on clinical and epidemiological perspectives. Nevertheless, after an abrupt vancomycin-resistant Enterococcus faecium dissemination in the Méderi teaching hospital, ending up in an outbreak, further measures needed to be taken into consideration. The present study describes the vancomycin-resistant Enterococcus faecium pattern within Colombian’s largest installed-bed capacity hospital in 2016. Methods Thirty-three vancomycin-resistant Enterococcus faecium isolates were recovered during a 5-month period in 2016. Multilocus variable-number tandem-repeat analysis was used for molecular typing to determine clonality amongst strains. A modified time-place-sequence algorithm was used to trace VREfm spread patterns during the outbreak period and estimate transmission routes. Results Four clonal profiles were identified. Chronological clonal profile follow-up suggested a transitional spread from profile “A” to profile “B”, returning to a higher prevalence of “A” by the end of the study. Antibiotic susceptibility indicated high-level vancomycin-resistance in most isolates frequently matching vanA gene identification.
publishDate 2019
dc.date.accessioned.none.fl_str_mv 2019-07-29T13:17:09Z
dc.date.available.none.fl_str_mv 2019-07-29T13:17:09Z
dc.date.issued.none.fl_str_mv 2019
dc.type.spa.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.local.spa.fl_str_mv artículo
dc.identifier.issn.none.fl_str_mv 1471-2334
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/1569
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1186/s12879-019-3877-7
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
dc.identifier.repourl.none.fl_str_mv repourl:https://repositorio.unbosque.edu.co
identifier_str_mv 1471-2334
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
repourl:https://repositorio.unbosque.edu.co
url http://hdl.handle.net/20.500.12495/1569
https://doi.org/10.1186/s12879-019-3877-7
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv BMC Infectious Diseases, 1471-2334, Vol.19, Nro.258, 2019 p. 1-11
dc.relation.uri.none.fl_str_mv https://bmcinfectdis.biomedcentral.com/articles/10.1186/s12879-019-3877-7
dc.rights.*.fl_str_mv Attribution 4.0 International
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/4.0/
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf434
dc.rights.creativecommons.none.fl_str_mv 2019
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
Acceso abierto
http://purl.org/coar/access_right/c_abf434
2019
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Biomed Central
dc.publisher.journal.spa.fl_str_mv BMC Infectious Diseases
institution Universidad El Bosque
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spelling Corredor, Nancy CarolinaLópez, CarolinaAguilera, Paula AndreaRodríguez-Leguizamón, GiovanniLeal, Aura LucíaOvalle-Guerro, María VictoriaPardo-Oviedo, Juan MauricioPatarroyo, Manuel AlfonsoPrieto, Lina MaríaChica, Claudia Elena2019-07-29T13:17:09Z2019-07-29T13:17:09Z20191471-2334http://hdl.handle.net/20.500.12495/1569https://doi.org/10.1186/s12879-019-3877-7instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengBiomed CentralBMC Infectious DiseasesBMC Infectious Diseases, 1471-2334, Vol.19, Nro.258, 2019 p. 1-11https://bmcinfectdis.biomedcentral.com/articles/10.1186/s12879-019-3877-7Attribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf4342019http://purl.org/coar/access_right/c_abf2Enterococcus faecium resistente a la vancomicinaVigilancia de brotesResistencia antimicrobianaResistencia a la vancomicinaBrotes de enfermedadesVirologíaVancomycin-resistant Enterococcus faeciumOutbreak surveillanceAntimicrobial resistanceAn epidemiological and molecular study regarding the spread of vancomycinresistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016articleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Background Enterococcus faecium is ranked worldwide as one of the top ten pathogens identified in healthcare-associated infections (HAI) and is classified as one of the high priority pathogens for research and development of new antibiotics worldwide. Due to molecular biology techniques’ higher costs, the approach for identifying and controlling infectious diseases in developing countries has been based on clinical and epidemiological perspectives. Nevertheless, after an abrupt vancomycin-resistant Enterococcus faecium dissemination in the Méderi teaching hospital, ending up in an outbreak, further measures needed to be taken into consideration. The present study describes the vancomycin-resistant Enterococcus faecium pattern within Colombian’s largest installed-bed capacity hospital in 2016. Methods Thirty-three vancomycin-resistant Enterococcus faecium isolates were recovered during a 5-month period in 2016. Multilocus variable-number tandem-repeat analysis was used for molecular typing to determine clonality amongst strains. A modified time-place-sequence algorithm was used to trace VREfm spread patterns during the outbreak period and estimate transmission routes. Results Four clonal profiles were identified. Chronological clonal profile follow-up suggested a transitional spread from profile “A” to profile “B”, returning to a higher prevalence of “A” by the end of the study. Antibiotic susceptibility indicated high-level vancomycin-resistance in most isolates frequently matching vanA gene identification.ORIGINALCorredor N.C., López C., Aguilera P.A., Prieto L.M., Rodríguez-Leguizamón G., Leal A.L._2019.pdfCorredor N.C., López C., Aguilera P.A., Prieto L.M., Rodríguez-Leguizamón G., Leal A.L._2019.pdfapplication/pdf1183563https://repositorio.unbosque.edu.co/bitstreams/5049f018-046e-4c7c-91d1-fc7e7c769885/download9e696cfd8b705c31a55c4e74ecf82be9MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8908https://repositorio.unbosque.edu.co/bitstreams/e57274b7-e681-410f-9612-e97aafc950e9/download0175ea4a2d4caec4bbcc37e300941108MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/6f7cf18b-6549-4c1d-9f91-2ec8e2487800/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILCorredor N.C., López C., Aguilera P.A., Prieto L.M., Rodríguez-Leguizamón G., Leal A.L._2019.pdf.jpgCorredor N.C., López C., Aguilera P.A., Prieto L.M., Rodríguez-Leguizamón G., Leal A.L._2019.pdf.jpgIM Thumbnailimage/jpeg9803https://repositorio.unbosque.edu.co/bitstreams/ec861482-4275-4e47-8bdc-a9d78e8dacfd/download5515438359b99947b10ffa9399948e23MD54TEXTCorredor N.C., López C., Aguilera P.A., Prieto L.M., Rodríguez-Leguizamón G., Leal A.L._2019.pdf.txtCorredor N.C., López C., Aguilera P.A., Prieto L.M., Rodríguez-Leguizamón G., Leal A.L._2019.pdf.txtExtracted texttext/plain53247https://repositorio.unbosque.edu.co/bitstreams/eca2370a-9997-4140-a43b-40a3d08a0d17/download5fff32010278b1e99ca80d2b20ee75a1MD5520.500.12495/1569oai:repositorio.unbosque.edu.co:20.500.12495/15692024-02-07 06:24:14.429http://creativecommons.org/licenses/by/4.0/Attribution 4.0 Internationalopen.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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