Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data

Bordetella pertussis(B. pertussis) is the causative agent of pertussis, also referenced aswhooping cough. Although pertussis has been appropriately controlled by routine im-munization of infants, it has experienced a resurgence since the beginning of the 21stcentury. Given that elucidating the immun...

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Autores:
Deng, Nan
Ramirez, Juan C.
Carey, Michelle
Miao, Hongyu
Arias, César A.
Rice, Andrew P.
Wu, Hulin
Tipo de recurso:
Fecha de publicación:
2019
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/1849
Acceso en línea:
http://hdl.handle.net/20.500.12495/1849
https://doi.org/10.1016/j.idm.2019.06.001
Palabra clave:
Bordetella pertussis
Alergia e inmunología
Resistencia a medicamentos
Rights
License
Attribution-NonCommercial-NoDerivatives 4.0 International
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network_acronym_str UNBOSQUE2
network_name_str Repositorio U. El Bosque
repository_id_str
dc.title.spa.fl_str_mv Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
title Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
spellingShingle Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
Bordetella pertussis
Alergia e inmunología
Resistencia a medicamentos
title_short Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
title_full Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
title_fullStr Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
title_full_unstemmed Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
title_sort Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data
dc.creator.fl_str_mv Deng, Nan
Ramirez, Juan C.
Carey, Michelle
Miao, Hongyu
Arias, César A.
Rice, Andrew P.
Wu, Hulin
dc.contributor.author.none.fl_str_mv Deng, Nan
Ramirez, Juan C.
Carey, Michelle
Miao, Hongyu
Arias, César A.
Rice, Andrew P.
Wu, Hulin
dc.subject.decs.spa.fl_str_mv Bordetella pertussis
Alergia e inmunología
Resistencia a medicamentos
topic Bordetella pertussis
Alergia e inmunología
Resistencia a medicamentos
description Bordetella pertussis(B. pertussis) is the causative agent of pertussis, also referenced aswhooping cough. Although pertussis has been appropriately controlled by routine im-munization of infants, it has experienced a resurgence since the beginning of the 21stcentury. Given that elucidating the immune response to pertussis is a crucial factor toimprove therapeutic and preventive treatments, we re-analyzed a time course microarraydataset ofB. pertussisinfection by applying a newly developed dynamic data analysispipeline. Our results indicate that the immune response toB. pertussisis highly dynamicand heterologous across different organs during infection. Th1 and Th17 cells, which aretwo critical types of T helper cell populations in the immune response toB. pertussis, andfollicular T helper cells (TFHs), which are also essential for generating antibodies, might begenerated at different time points and distinct locations after infection. This phenomenonmay indicate that different lymphoid organs may have their unique functions duringinfection. Thesefindings provide a better understanding of the basic immunology ofbacterial infection, which may provide valuable insights for the improvement of pertussisvaccine design in the future.
publishDate 2019
dc.date.accessioned.none.fl_str_mv 2019-11-18T16:35:40Z
dc.date.available.none.fl_str_mv 2019-11-18T16:35:40Z
dc.date.issued.none.fl_str_mv 2019
dc.type.spa.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.local.spa.fl_str_mv artículo
dc.identifier.issn.none.fl_str_mv 2468-0427
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/1849
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1016/j.idm.2019.06.001
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
dc.identifier.repourl.none.fl_str_mv repourl:https://repositorio.unbosque.edu.co
identifier_str_mv 2468-0427
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
repourl:https://repositorio.unbosque.edu.co
url http://hdl.handle.net/20.500.12495/1849
https://doi.org/10.1016/j.idm.2019.06.001
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv Infectious disease modelling, 2468-0427, Vol. 4, 2019, p. 215-226
dc.relation.uri.none.fl_str_mv https://www.sciencedirect.com/science/article/pii/S2468042719300016?via%3Dihub
dc.rights.*.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf118
dc.rights.creativecommons.none.fl_str_mv 2019
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
Acceso abierto
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2019
http://purl.org/coar/access_right/c_abf2
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dc.publisher.spa.fl_str_mv KeAi Communications
dc.publisher.journal.spa.fl_str_mv Infectious disease modelling
institution Universidad El Bosque
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spelling Deng, NanRamirez, Juan C.Carey, MichelleMiao, HongyuArias, César A.Rice, Andrew P.Wu, Hulin2019-11-18T16:35:40Z2019-11-18T16:35:40Z20192468-0427http://hdl.handle.net/20.500.12495/1849https://doi.org/10.1016/j.idm.2019.06.001instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengKeAi CommunicationsInfectious disease modellingInfectious disease modelling, 2468-0427, Vol. 4, 2019, p. 215-226https://www.sciencedirect.com/science/article/pii/S2468042719300016?via%3DihubAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf1182019http://purl.org/coar/access_right/c_abf2Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression dataarticleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501Bordetella pertussisAlergia e inmunologíaResistencia a medicamentosBordetella pertussis(B. pertussis) is the causative agent of pertussis, also referenced aswhooping cough. Although pertussis has been appropriately controlled by routine im-munization of infants, it has experienced a resurgence since the beginning of the 21stcentury. Given that elucidating the immune response to pertussis is a crucial factor toimprove therapeutic and preventive treatments, we re-analyzed a time course microarraydataset ofB. pertussisinfection by applying a newly developed dynamic data analysispipeline. Our results indicate that the immune response toB. pertussisis highly dynamicand heterologous across different organs during infection. Th1 and Th17 cells, which aretwo critical types of T helper cell populations in the immune response toB. pertussis, andfollicular T helper cells (TFHs), which are also essential for generating antibodies, might begenerated at different time points and distinct locations after infection. This phenomenonmay indicate that different lymphoid organs may have their unique functions duringinfection. Thesefindings provide a better understanding of the basic immunology ofbacterial infection, which may provide valuable insights for the improvement of pertussisvaccine design in the future.ORIGINALDeng N., Ramirez J.C., Carey M., Miao H., Arias C.A., Rice A.P., Wu H._2019.pdfDeng N., Ramirez J.C., Carey M., Miao H., Arias C.A., Rice A.P., Wu H._2019.pdfapplication/pdf1848677https://repositorio.unbosque.edu.co/bitstreams/fe194a22-301c-4990-952b-fcba88033f3a/download0197321f571652a232cb34a316664fcaMD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8805https://repositorio.unbosque.edu.co/bitstreams/e45e60ae-3722-41f1-985d-085f07971094/download4460e5956bc1d1639be9ae6146a50347MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://repositorio.unbosque.edu.co/bitstreams/29d4d833-2d8f-419f-ab07-b8647b186c96/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILDeng N., Ramirez J.C., Carey M., Miao H., Arias C.A., Rice A.P., Wu H._2019.pdf.jpgDeng N., Ramirez J.C., Carey M., Miao H., Arias C.A., Rice A.P., Wu H._2019.pdf.jpgIM Thumbnailimage/jpeg11160https://repositorio.unbosque.edu.co/bitstreams/132dbd89-995d-4818-b51a-9699b5210004/downloadccf355ba61ce971eebab4d174fd81817MD54TEXTDeng N., Ramirez J.C., Carey M., Miao H., Arias C.A., Rice A.P., Wu H._2019.pdf.txtDeng N., Ramirez J.C., Carey M., Miao H., Arias C.A., Rice A.P., Wu H._2019.pdf.txtExtracted texttext/plain66131https://repositorio.unbosque.edu.co/bitstreams/275622e5-0571-478a-b90a-3603193486b8/download76c3c9ee865ddeaba5fee6a35a76c9b6MD5520.500.12495/1849oai:repositorio.unbosque.edu.co:20.500.12495/18492024-02-06 23:59:38.55http://creativecommons.org/licenses/by-nc-nd/4.0/Attribution-NonCommercial-NoDerivatives 4.0 Internationalopen.accesshttps://repositorio.unbosque.edu.coRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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