First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador

Our aim was identify of the pandemic B2-ST131 Escherichia coli clone by to the Institute Pasteur and Achtman scheme, and investigate the resistance profile phenotypic-genotypic, with identification of class 1 integron. Of thirty-five ESBL-producing isolates recovered of patients with diagnosis of ur...

Full description

Autores:
Chiluisa-Guacho, Carlos
Dutra-Asensi, Marise
Escobar-Pérez, Javier
Tipo de recurso:
Fecha de publicación:
2019
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/1471
Acceso en línea:
http://hdl.handle.net/20.500.12495/1471
https://doi.org/10.3390/pathogens7020042
Palabra clave:
Inmunología
Clonación molecular
Genética
Escherichia coli
Resistance
ST131
ESBL
Rights
License
Attribution 4.0 International
id UNBOSQUE2_16ae416a23105cf1556a233b28df31f2
oai_identifier_str oai:repositorio.unbosque.edu.co:20.500.12495/1471
network_acronym_str UNBOSQUE2
network_name_str Repositorio U. El Bosque
repository_id_str
dc.title.spa.fl_str_mv First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
title First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
spellingShingle First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
Inmunología
Clonación molecular
Genética
Escherichia coli
Resistance
ST131
ESBL
title_short First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
title_full First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
title_fullStr First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
title_full_unstemmed First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
title_sort First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuador
dc.creator.fl_str_mv Chiluisa-Guacho, Carlos
Dutra-Asensi, Marise
Escobar-Pérez, Javier
dc.contributor.author.none.fl_str_mv Chiluisa-Guacho, Carlos
Dutra-Asensi, Marise
Escobar-Pérez, Javier
dc.contributor.orcid.none.fl_str_mv Escobar-Pérez, Javier [0000-0002-0432-6978]
dc.subject.decs.spa.fl_str_mv Inmunología
Clonación molecular
Genética
topic Inmunología
Clonación molecular
Genética
Escherichia coli
Resistance
ST131
ESBL
dc.subject.keywords.spa.fl_str_mv Escherichia coli
Resistance
ST131
ESBL
description Our aim was identify of the pandemic B2-ST131 Escherichia coli clone by to the Institute Pasteur and Achtman scheme, and investigate the resistance profile phenotypic-genotypic, with identification of class 1 integron. Of thirty-five ESBL-producing isolates recovered of patients with diagnosis of urinary tract infections (UTI), six E. coli strains serotype O25 were identified with resistance antimicrobial to several groups of antibiotics such as broad-spectrum cephalosporins, fluoroquinolones and aminoglycosides, harboring blaSHV, blaCTX-M genes in all isolates and blaTEM in two isolates. Sequencing of blaCTX-M revealed CTX-M-15 in all strains. The PMQR aac(6’)-Ib-cr and qnrB19 genes were presented in five and four isolates respectively, AMEs genes aac(6’)-Ib and aac(3)-IIa were presented in strain amikacin-gentamicin-resistant. Sequencing of the variable regions of the class 1 integron revealed dfrA and aadA genes cassette. The analysis of multilocus sequence typing (MLST) confirms the presence of the pandemic B2-ST131 E. coli clone by Achtman scheme in all ST43 isolates obtained by of the Institute Pasteur scheme. The results presented herein, reveal the presence of B2-ST131 E. coli clone in Ecuador, disseminated in hospitals and community settings.
publishDate 2019
dc.date.accessioned.none.fl_str_mv 2019-06-28T18:41:20Z
dc.date.available.none.fl_str_mv 2019-06-28T18:41:20Z
dc.date.issued.none.fl_str_mv 2019
dc.type.spa.fl_str_mv article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.local.spa.fl_str_mv artículo
dc.identifier.issn.none.fl_str_mv 2076-0817
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12495/1471
dc.identifier.doi.none.fl_str_mv https://doi.org/10.3390/pathogens7020042
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
dc.identifier.repourl.none.fl_str_mv repourl:https://repositorio.unbosque.edu.co
identifier_str_mv 2076-0817
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
repourl:https://repositorio.unbosque.edu.co
url http://hdl.handle.net/20.500.12495/1471
https://doi.org/10.3390/pathogens7020042
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.uri.none.fl_str_mv https://www.mdpi.com/2076-0817/7/2/42
dc.rights.*.fl_str_mv Attribution 4.0 International
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/4.0/
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv http://purl.org/coar/access_right/c_abf364
dc.rights.creativecommons.none.fl_str_mv 2018
rights_invalid_str_mv Attribution 4.0 International
http://creativecommons.org/licenses/by/4.0/
Acceso abierto
http://purl.org/coar/access_right/c_abf364
2018
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv MDPI
institution Universidad El Bosque
bitstream.url.fl_str_mv http://18.204.144.38/bitstreams/05f93d96-fe2e-4541-bca3-7eb4f6c33b8b/download
http://18.204.144.38/bitstreams/2363f6c8-bc8a-449e-b220-2cb6a80c879d/download
http://18.204.144.38/bitstreams/7b9c21e2-6e7a-4fa0-9431-c38279744f53/download
http://18.204.144.38/bitstreams/9f388043-f258-4844-8188-8a6cbad2e6f5/download
http://18.204.144.38/bitstreams/165af240-65db-45a3-b794-4b7cdc249b8f/download
http://18.204.144.38/bitstreams/f7416331-a81b-4523-a5a0-4dbe4f3b9ae3/download
bitstream.checksum.fl_str_mv 0b8ed9da66fec05f0ec2cb17ec7fe0a2
0175ea4a2d4caec4bbcc37e300941108
8a4605be74aa9ea9d79846c1fba20a33
5c65838846e1796e41eb51b83f2eebf3
85381eb7e762ae2c802a28820da12423
7ab5818ddc026f824db8c91f50542325
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
MD5
MD5
repository.name.fl_str_mv DSpace Pre-instalado Biteca S.A.S
repository.mail.fl_str_mv bibliotecas@biteca.com
_version_ 1814100681050554368
spelling Chiluisa-Guacho, CarlosDutra-Asensi, MariseEscobar-Pérez, JavierEscobar-Pérez, Javier [0000-0002-0432-6978]2019-06-28T18:41:20Z2019-06-28T18:41:20Z20192076-0817http://hdl.handle.net/20.500.12495/1471https://doi.org/10.3390/pathogens7020042instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquerepourl:https://repositorio.unbosque.edu.coapplication/pdfengMDPIhttps://www.mdpi.com/2076-0817/7/2/42Attribution 4.0 Internationalhttp://creativecommons.org/licenses/by/4.0/Acceso abiertohttp://purl.org/coar/access_right/c_abf3642018http://purl.org/coar/access_right/c_abf2First Detection of the CTXM-15 Producing Escherichia coli O25-ST131 Pandemic Clone in Ecuadorarticleartículohttp://purl.org/coar/version/c_970fb48d4fbd8a85http://purl.org/coar/resource_type/c_6501InmunologíaClonación molecularGenéticaEscherichia coliResistanceST131ESBLOur aim was identify of the pandemic B2-ST131 Escherichia coli clone by to the Institute Pasteur and Achtman scheme, and investigate the resistance profile phenotypic-genotypic, with identification of class 1 integron. Of thirty-five ESBL-producing isolates recovered of patients with diagnosis of urinary tract infections (UTI), six E. coli strains serotype O25 were identified with resistance antimicrobial to several groups of antibiotics such as broad-spectrum cephalosporins, fluoroquinolones and aminoglycosides, harboring blaSHV, blaCTX-M genes in all isolates and blaTEM in two isolates. Sequencing of blaCTX-M revealed CTX-M-15 in all strains. The PMQR aac(6’)-Ib-cr and qnrB19 genes were presented in five and four isolates respectively, AMEs genes aac(6’)-Ib and aac(3)-IIa were presented in strain amikacin-gentamicin-resistant. Sequencing of the variable regions of the class 1 integron revealed dfrA and aadA genes cassette. The analysis of multilocus sequence typing (MLST) confirms the presence of the pandemic B2-ST131 E. coli clone by Achtman scheme in all ST43 isolates obtained by of the Institute Pasteur scheme. The results presented herein, reveal the presence of B2-ST131 E. coli clone in Ecuador, disseminated in hospitals and community settings.ORIGINALChiluisa-Guacho C., Escobar-Perez J., Dutra-Asensi M._2018.pdfChiluisa-Guacho C., Escobar-Perez J., Dutra-Asensi M._2018.pdfapplication/pdf2515534http://18.204.144.38/bitstreams/05f93d96-fe2e-4541-bca3-7eb4f6c33b8b/download0b8ed9da66fec05f0ec2cb17ec7fe0a2MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8908http://18.204.144.38/bitstreams/2363f6c8-bc8a-449e-b220-2cb6a80c879d/download0175ea4a2d4caec4bbcc37e300941108MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://18.204.144.38/bitstreams/7b9c21e2-6e7a-4fa0-9431-c38279744f53/download8a4605be74aa9ea9d79846c1fba20a33MD53THUMBNAILCaratula 5.jpgCaratula 5.jpgimage/jpeg16151http://18.204.144.38/bitstreams/9f388043-f258-4844-8188-8a6cbad2e6f5/download5c65838846e1796e41eb51b83f2eebf3MD54Chiluisa-Guacho C., Escobar-Perez J., Dutra-Asensi M._2018.pdf.jpgChiluisa-Guacho C., Escobar-Perez J., Dutra-Asensi M._2018.pdf.jpgIM Thumbnailimage/jpeg11476http://18.204.144.38/bitstreams/165af240-65db-45a3-b794-4b7cdc249b8f/download85381eb7e762ae2c802a28820da12423MD55TEXTChiluisa-Guacho C., Escobar-Perez J., Dutra-Asensi M._2018.pdf.txtChiluisa-Guacho C., Escobar-Perez J., Dutra-Asensi M._2018.pdf.txtExtracted texttext/plain12709http://18.204.144.38/bitstreams/f7416331-a81b-4523-a5a0-4dbe4f3b9ae3/download7ab5818ddc026f824db8c91f50542325MD5620.500.12495/1471oai:18.204.144.38:20.500.12495/14712024-02-06 22:15:18.485http://creativecommons.org/licenses/by/4.0/Attribution 4.0 Internationalopen.accesshttp://18.204.144.38DSpace Pre-instalado Biteca S.A.Sbibliotecas@biteca.comTk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=