Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía

ilustraciones, fotografías

Autores:
Gallego Suárez, Laura Juliana
Tipo de recurso:
Fecha de publicación:
2023
Institución:
Universidad Nacional de Colombia
Repositorio:
Universidad Nacional de Colombia
Idioma:
spa
OAI Identifier:
oai:repositorio.unal.edu.co:unal/83367
Acceso en línea:
https://repositorio.unal.edu.co/handle/unal/83367
https://repositorio.unal.edu.co/
Palabra clave:
medicina
Biochemical markers
Eye diseases
Marcadores bioquímicos
Enfermedades de los ojos
Inteligencia
Artificial
Oclusión
Venosa
Tomografia
Coherencia
Optica
Rights
openAccess
License
Atribución-NoComercial-SinDerivadas 4.0 Internacional
id UNACIONAL2_ac8f601f6f848e17bae0d64b23cede73
oai_identifier_str oai:repositorio.unal.edu.co:unal/83367
network_acronym_str UNACIONAL2
network_name_str Universidad Nacional de Colombia
repository_id_str
dc.title.spa.fl_str_mv Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
dc.title.translated.eng.fl_str_mv Biomarkers of retinal vein occlusions using a deep learning strategy applied to images obtained by OCT angiography.
title Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
spellingShingle Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
medicina
Biochemical markers
Eye diseases
Marcadores bioquímicos
Enfermedades de los ojos
Inteligencia
Artificial
Oclusión
Venosa
Tomografia
Coherencia
Optica
title_short Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
title_full Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
title_fullStr Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
title_full_unstemmed Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
title_sort Biomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografía
dc.creator.fl_str_mv Gallego Suárez, Laura Juliana
dc.contributor.advisor.none.fl_str_mv Quijano Nieto, Bernardo Alfonso
dc.contributor.author.none.fl_str_mv Gallego Suárez, Laura Juliana
dc.contributor.educationalvalidator.none.fl_str_mv Perdomo Charry Oscar Julian
dc.contributor.orcid.spa.fl_str_mv 0000-0001-5056-5956
dc.subject.ddc.spa.fl_str_mv medicina
topic medicina
Biochemical markers
Eye diseases
Marcadores bioquímicos
Enfermedades de los ojos
Inteligencia
Artificial
Oclusión
Venosa
Tomografia
Coherencia
Optica
dc.subject.lemb.eng.fl_str_mv Biochemical markers
Eye diseases
dc.subject.lemb.spa.fl_str_mv Marcadores bioquímicos
Enfermedades de los ojos
dc.subject.proposal.spa.fl_str_mv Inteligencia
Artificial
Oclusión
Venosa
Tomografia
Coherencia
Optica
description ilustraciones, fotografías
publishDate 2023
dc.date.accessioned.none.fl_str_mv 2023-02-07T19:37:18Z
dc.date.available.none.fl_str_mv 2023-02-07T19:37:18Z
dc.date.issued.none.fl_str_mv 2023-02
dc.type.spa.fl_str_mv Trabajo de grado - Especialidad Médica
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/masterThesis
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/acceptedVersion
dc.type.content.spa.fl_str_mv Text
dc.type.redcol.spa.fl_str_mv http://purl.org/redcol/resource_type/TM
status_str acceptedVersion
dc.identifier.uri.none.fl_str_mv https://repositorio.unal.edu.co/handle/unal/83367
dc.identifier.instname.spa.fl_str_mv Universidad Nacional de Colombia
dc.identifier.reponame.spa.fl_str_mv Repositorio Institucional Universidad Nacional de Colombia
dc.identifier.repourl.spa.fl_str_mv https://repositorio.unal.edu.co/
url https://repositorio.unal.edu.co/handle/unal/83367
https://repositorio.unal.edu.co/
identifier_str_mv Universidad Nacional de Colombia
Repositorio Institucional Universidad Nacional de Colombia
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.references.spa.fl_str_mv Rogers S, McIntosh RL, Cheung N, Lim L, Wang JJ, Mitchell P, et al. The Prevalence of Retinal Vein Occlusion: Pooled Data from Population Studies from the United States, Europe, Asia, and Australia. Ophthalmology. 2010 Feb;117(2):313-319.e1.
Yasuda M, Kiyohara Y, Arakawa S, Hata Y, Yonemoto K, Doi Y, et al. Prevalence and Systemic Risk Factors for Retinal Vein Occlusion in a General Japanese Population: The Hisayama Study. Investigative Opthalmology & Visual Science. 2010 Jun 1;51(6):3205.
Cugati S. Ten-Year Incidence of Retinal Vein Occlusion in an Older Population. Archives of Ophthalmology. 2006 May 1;124(5):726.
Klein R. The 15-Year Cumulative Incidence of Retinal Vein Occlusion. Archives of Ophthalmology. 2008 Apr 1;126(4):513.
Buehl W, Sacu S, Schmidt-Erfurth U. Retinal Vein Occlusions. In 2010. p. 54–72.
Brown G, Yoo J, Brown M, Turpcu A, Rajput Y, Benson W, et al. The Burden of Retinal Venous Occlusion: An Assessment of Fellow Eyes in 1000 Cases. Ophthalmol Retina. 2017 Sep;1(5):404–12.
Chang A. The role of artificial intelligence in digital health. Digital health entrepreneurship. 2020;71–81.
Topol EJ. High-performance medicine: the convergence of human and artificial intelligence. Nat Med. 2019 Jan 7;25(1):44–56.
Rispoli M, Savastano MC, Lumbroso B. Capillary network anomalies in branch retinal vein occlusion on optical coherence tomography angiography. Retina. 2015 Nov;35(11):2332–8.
Simon J, Conliffe T, Kitei P. Non-operative management: An evidence-based approach. In: Seminars in Spine Surgery. Elsevier; 2016. p. 8–13.
Hamet P, Tremblay J. Artificial intelligence in medicine. Metabolism. 2017 Apr;69:S36–40.
Kapoor R, Walters SP, Al-Aswad LA. The current state of artificial intelligence in ophthalmology. Surv Ophthalmol. 2019 Mar;64(2):233–40
Tsai G, Banaee T, Conti F, Singh R. Optical coherence tomography angiography in eyes with retinal vein occlusion. J Ophthalmic Vis Res. 2018;13(3):315.
Glanville J, Patterson J, McCool R, Ferreira A, Gairy K, Pearce I. Efficacy and safety of widely used treatments for macular oedema secondary to retinal vein occlusion: a systematic review. BMC Ophthalmol. 2014 Dec 21;14(1):7.
Hayreh SS, Podhajsky PA, Zimmerman MB. Natural History of Visual Outcome in Central Retinal Vein Occlusion. Ophthalmology. 2011 Jan;118(1):119-133.e2.
Hayreh SS, Klugman MR, Beri M, Kimura AE, Podhajsky P. Differentiation of ischemic from non-ischemic central retinal vein occlusion during the early acute phase. Graefe’s Archive for Clinical and Experimental Ophthalmology. 1990;228(3):201–17.
Patel A, Nguyen C, Lu S. Central retinal vein occlusion: A review of current Evidence-based treatment options. Middle East Afr J Ophthalmol. 2016;23(1):44.
Bowers dk, finkelstein d, wolff sm, green wr. Branch retinal vein occlusion. Retina. 1987;7(4):252–9.
Newman-Casey PA, Stem M, Talwar N, Musch DC, Besirli CG, Stein JD. Risk Factors Associated with Developing Branch Retinal Vein Occlusion Among Enrollees in a United States Managed Care Plan. Ophthalmology. 2014 Oct;121(10):1939–48.
Jaulim A, Ahmed B, Khanam T, Chatziralli IP. Branch retinal vein occlusion: epidemiology, pathogenesis, risk factors, clinical features, diagnosis, and complications. An update of the literature. Retina. 2013;33(5):901–10.
Ho JD, Tsai CY, Liou SW, Tsai RJF, Lin HC. Seasonal Variations in the Occurrence of Retinal Vein Occlusion: A Five-Year Nationwide Population-Based Study from Taiwan. Am J Ophthalmol. 2008 Apr;145(4):722-728.e3.
Oh J, Ahn J. Comparison of Retinal Layer Thickness and Vascular Density between Acute and Chronic Branch Retinal Vein Occlusion. Korean Journal of Ophthalmology. 2019;33(3):238.
Zawadzki RJ, Capps AG, Dae Yu Kim, Panorgias A, Stevenson SB, Hamann B, et al. Progress on Developing Adaptive Optics–Optical Coherence Tomography for In Vivo Retinal Imaging: Monitoring and Correction of Eye Motion Artifacts. IEEE Journal of Selected Topics in Quantum Electronics. 2014 Mar;20(2):322–33.
Coscas F, Glacet-Bernard A, Miere A, Caillaux V, Uzzan J, Lupidi M, et al. Optical Coherence Tomography Angiography in Retinal Vein Occlusion: Evaluation of Superficial and Deep Capillary Plexa. Am J Ophthalmol. 2016 Jan;161:160- 171.e2.
Adhi M, Filho MAB, Louzada RN, Kuehlewein L, de Carlo TE, Baumal CR, et al. Retinal Capillary Network and Foveal Avascular Zone in Eyes with Vein Occlusion and Fellow Eyes Analyzed With Optical Coherence Tomography Angiography. Investigative Opthalmology & Visual Science. 2016 Jul 21;57(9):OCT486.
Kashani AH, Lee SY, Moshfeghi A, Durbin MK, Puliafito CA. Optical coherence tomography angiography of retinal venous occlusion. Retina. 2015 Nov;35(11):2323–31.
Novais EA, Waheed NK. Optical Coherence Tomography Angiography of Retinal Vein Occlusion. In 2016. p. 132–8.
Mastropasqua R, Toto L, di Antonio L, Borrelli E, Senatore A, di Nicola M, et al. Optical coherence tomography angiography microvascular findings in macular edema due to central and branch retinal vein occlusions. Sci Rep. 2017 Jan 18;7(1):40763.
Suzuki N, Hirano Y, Yoshida M, Tomiyasu T, Uemura A, Yasukawa T, et al. Microvascular Abnormalities on Optical Coherence Tomography Angiography in Macular Edema Associated With Branch Retinal Vein Occlusion. Am J Ophthalmol. 2016 Jan;161:126-132.e1.
Glacet-Bernard A, Sellam A, Coscas F, Coscas G, Souied EH. Optical Coherence Tomography Angiography in Retinal Vein Occlusion Treated with Dexamethasone Implant: A New Test for Follow-Up Evaluation. Eur J Ophthalmol. 2016 Sep 7;26(5):460–8.
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Savastano MC, Lumbroso B, Rispoli M. In vivo characterization of retinal vascularization morphology using optical coherence tomography angiography. Retina. 2015 Nov;35(11):2196–203.
Kadomoto S, Muraoka Y, Ooto S, Miwa Y, Iida Y, Suzuma K, et al. EVALUATION OF MACULAR ISCHEMIA IN EYES WITH BRANCH RETINAL VEIN OCCLUSION. Retina. 2018 Feb;38(2):272–82.
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Roy AG, Conjeti S, Karri SPK, Sheet D, Katouzian A, Wachinger C, et al. ReLayNet: retinal layer and fluid segmentation of macular optical coherence tomography using fully convolutional networks. Biomed Opt Express. 2017 Aug 1;8(8):3627
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dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.license.spa.fl_str_mv Atribución-NoComercial-SinDerivadas 4.0 Internacional
dc.rights.uri.spa.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/4.0/
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dc.format.extent.spa.fl_str_mv xiii, 37 páginas
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad Nacional de Colombia
dc.publisher.program.spa.fl_str_mv Bogotá - Medicina - Especialidad en Oftalmología
dc.publisher.faculty.spa.fl_str_mv Facultad de Medicina
dc.publisher.place.spa.fl_str_mv Bogotá, Colombia
dc.publisher.branch.spa.fl_str_mv Universidad Nacional de Colombia - Sede Bogotá
institution Universidad Nacional de Colombia
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spelling Atribución-NoComercial-SinDerivadas 4.0 Internacionalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Quijano Nieto, Bernardo Alfonso8137fdb85aaa121f419c1b92e9ebfb42Gallego Suárez, Laura Juliana9947fc0e56dd8d4320a469e139f8f07cPerdomo Charry Oscar Julian0000-0001-5056-59562023-02-07T19:37:18Z2023-02-07T19:37:18Z2023-02https://repositorio.unal.edu.co/handle/unal/83367Universidad Nacional de ColombiaRepositorio Institucional Universidad Nacional de Colombiahttps://repositorio.unal.edu.co/ilustraciones, fotografíasPropósito: Desarrollar un método computacional basado en Deep Learning (DL) para detectar automáticamente biomarcadores de oclusiones de venas retinianas en imágenes adquiridas por angiografía por tomografía de coherencia óptica (OCT-A) Diseño: Desarrollo de algoritmo para detectar biomarcadores de oclusiones de venas retinianas utilizando datos retrospectivos. (Texto tomado de la fuente)Purpose: To develop a computational method based on Deep Learning (DL) to automatically detect biomarkers of retinal vein occlusions in images acquired by optical coherence tomography angiography (OCT- A) Design: Algorithm development for detect biomarkers of retinal vein occlusions using retrospective data. Participants: Images of the superficial, deep, en face, choriocapillaris and outer retina to choriocapillaris (ORCC) layers obtained from 254 patients attended in an Ophthalmology Clinic were used to train and test an artificial intelligence (AI) model. Methods: The OCT-A scans were manually annotated with four biomarkers (BMs): disruption of the perifoveal capillary plexus, non-perfusion areas (NPAs), vascular tortuosity and cystoid spaces. Segmentation and identification were subsequently provided to build and training the DL model using Deep Convolutional Neural Networks (DNN) Main Outcome Measures: detection rate and jaccard index Results: The detection rate of the model for disruption of the perifoveal capillary plexus, non-perfusion areas (NPAs), vascular tortuosity and cystoid spaces were 93%, 92%, 91% and 84% respectively. The Jaccard index values were 0.85, 0.77, 0.72 and 0.73 respectively Conclusion: The proposed DL model may idEspecialidades MédicasEspecialista en Oftalmologíaxiii, 37 páginasapplication/pdfspaUniversidad Nacional de ColombiaBogotá - Medicina - Especialidad en OftalmologíaFacultad de MedicinaBogotá, ColombiaUniversidad Nacional de Colombia - Sede BogotámedicinaBiochemical markersEye diseasesMarcadores bioquímicosEnfermedades de los ojosInteligenciaArtificialOclusiónVenosaTomografiaCoherenciaOpticaBiomarcadores de oclusiones venosas retinianas mediante estrategia de aprendizaje profundo aplicada en imágenes adquiridas por OCT angiografíaBiomarkers of retinal vein occlusions using a deep learning strategy applied to images obtained by OCT angiography.Trabajo de grado - Especialidad Médicainfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/acceptedVersionTexthttp://purl.org/redcol/resource_type/TMRogers S, McIntosh RL, Cheung N, Lim L, Wang JJ, Mitchell P, et al. The Prevalence of Retinal Vein Occlusion: Pooled Data from Population Studies from the United States, Europe, Asia, and Australia. Ophthalmology. 2010 Feb;117(2):313-319.e1.Yasuda M, Kiyohara Y, Arakawa S, Hata Y, Yonemoto K, Doi Y, et al. Prevalence and Systemic Risk Factors for Retinal Vein Occlusion in a General Japanese Population: The Hisayama Study. Investigative Opthalmology & Visual Science. 2010 Jun 1;51(6):3205.Cugati S. Ten-Year Incidence of Retinal Vein Occlusion in an Older Population. Archives of Ophthalmology. 2006 May 1;124(5):726.Klein R. The 15-Year Cumulative Incidence of Retinal Vein Occlusion. Archives of Ophthalmology. 2008 Apr 1;126(4):513.Buehl W, Sacu S, Schmidt-Erfurth U. Retinal Vein Occlusions. In 2010. p. 54–72.Brown G, Yoo J, Brown M, Turpcu A, Rajput Y, Benson W, et al. The Burden of Retinal Venous Occlusion: An Assessment of Fellow Eyes in 1000 Cases. Ophthalmol Retina. 2017 Sep;1(5):404–12.Chang A. The role of artificial intelligence in digital health. Digital health entrepreneurship. 2020;71–81.Topol EJ. High-performance medicine: the convergence of human and artificial intelligence. Nat Med. 2019 Jan 7;25(1):44–56.Rispoli M, Savastano MC, Lumbroso B. Capillary network anomalies in branch retinal vein occlusion on optical coherence tomography angiography. Retina. 2015 Nov;35(11):2332–8.Simon J, Conliffe T, Kitei P. Non-operative management: An evidence-based approach. In: Seminars in Spine Surgery. Elsevier; 2016. p. 8–13.Hamet P, Tremblay J. Artificial intelligence in medicine. Metabolism. 2017 Apr;69:S36–40.Kapoor R, Walters SP, Al-Aswad LA. The current state of artificial intelligence in ophthalmology. Surv Ophthalmol. 2019 Mar;64(2):233–40Tsai G, Banaee T, Conti F, Singh R. Optical coherence tomography angiography in eyes with retinal vein occlusion. J Ophthalmic Vis Res. 2018;13(3):315.Glanville J, Patterson J, McCool R, Ferreira A, Gairy K, Pearce I. Efficacy and safety of widely used treatments for macular oedema secondary to retinal vein occlusion: a systematic review. BMC Ophthalmol. 2014 Dec 21;14(1):7.Hayreh SS, Podhajsky PA, Zimmerman MB. Natural History of Visual Outcome in Central Retinal Vein Occlusion. Ophthalmology. 2011 Jan;118(1):119-133.e2.Hayreh SS, Klugman MR, Beri M, Kimura AE, Podhajsky P. Differentiation of ischemic from non-ischemic central retinal vein occlusion during the early acute phase. Graefe’s Archive for Clinical and Experimental Ophthalmology. 1990;228(3):201–17.Patel A, Nguyen C, Lu S. Central retinal vein occlusion: A review of current Evidence-based treatment options. Middle East Afr J Ophthalmol. 2016;23(1):44.Bowers dk, finkelstein d, wolff sm, green wr. Branch retinal vein occlusion. Retina. 1987;7(4):252–9.Newman-Casey PA, Stem M, Talwar N, Musch DC, Besirli CG, Stein JD. Risk Factors Associated with Developing Branch Retinal Vein Occlusion Among Enrollees in a United States Managed Care Plan. Ophthalmology. 2014 Oct;121(10):1939–48.Jaulim A, Ahmed B, Khanam T, Chatziralli IP. Branch retinal vein occlusion: epidemiology, pathogenesis, risk factors, clinical features, diagnosis, and complications. An update of the literature. Retina. 2013;33(5):901–10.Ho JD, Tsai CY, Liou SW, Tsai RJF, Lin HC. Seasonal Variations in the Occurrence of Retinal Vein Occlusion: A Five-Year Nationwide Population-Based Study from Taiwan. Am J Ophthalmol. 2008 Apr;145(4):722-728.e3.Oh J, Ahn J. Comparison of Retinal Layer Thickness and Vascular Density between Acute and Chronic Branch Retinal Vein Occlusion. Korean Journal of Ophthalmology. 2019;33(3):238.Zawadzki RJ, Capps AG, Dae Yu Kim, Panorgias A, Stevenson SB, Hamann B, et al. Progress on Developing Adaptive Optics–Optical Coherence Tomography for In Vivo Retinal Imaging: Monitoring and Correction of Eye Motion Artifacts. IEEE Journal of Selected Topics in Quantum Electronics. 2014 Mar;20(2):322–33.Coscas F, Glacet-Bernard A, Miere A, Caillaux V, Uzzan J, Lupidi M, et al. Optical Coherence Tomography Angiography in Retinal Vein Occlusion: Evaluation of Superficial and Deep Capillary Plexa. Am J Ophthalmol. 2016 Jan;161:160- 171.e2.Adhi M, Filho MAB, Louzada RN, Kuehlewein L, de Carlo TE, Baumal CR, et al. Retinal Capillary Network and Foveal Avascular Zone in Eyes with Vein Occlusion and Fellow Eyes Analyzed With Optical Coherence Tomography Angiography. Investigative Opthalmology & Visual Science. 2016 Jul 21;57(9):OCT486.Kashani AH, Lee SY, Moshfeghi A, Durbin MK, Puliafito CA. Optical coherence tomography angiography of retinal venous occlusion. Retina. 2015 Nov;35(11):2323–31.Novais EA, Waheed NK. Optical Coherence Tomography Angiography of Retinal Vein Occlusion. In 2016. p. 132–8.Mastropasqua R, Toto L, di Antonio L, Borrelli E, Senatore A, di Nicola M, et al. 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