Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia
Ilustraciones, mapas
- Autores:
-
Castaño Tenorio, Isaí
- Tipo de recurso:
- Fecha de publicación:
- 2024
- Institución:
- Universidad Nacional de Colombia
- Repositorio:
- Universidad Nacional de Colombia
- Idioma:
- spa
- OAI Identifier:
- oai:repositorio.unal.edu.co:unal/86336
- Palabra clave:
- 570 - Biología::576 - Genética y evolución
Caquetaia kraussii - Investigaciones - Colombia
Cichlidae - Investigaciones - Colombia
Peces - Investigaciones - Colombia
Morfometría - Investigaciones - Colombia
Diversidad genética - Investigaciones - Colombia
Cichlidae
Diversidad genética
Diferenciación genética
Morfometría geométrica
Cichlidae
Genetic diversity
Genetic differentiation
Geometric morphometrics
- Rights
- openAccess
- License
- Atribución-NoComercial 4.0 Internacional
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| dc.title.spa.fl_str_mv |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| dc.title.translated.eng.fl_str_mv |
Population genetic and phenotypic variation of the cichlid Caquetaia kraussii (Steindachner, 1878) in the middle and low basin of the Cauca River, Colombia |
| title |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| spellingShingle |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia 570 - Biología::576 - Genética y evolución Caquetaia kraussii - Investigaciones - Colombia Cichlidae - Investigaciones - Colombia Peces - Investigaciones - Colombia Morfometría - Investigaciones - Colombia Diversidad genética - Investigaciones - Colombia Cichlidae Diversidad genética Diferenciación genética Morfometría geométrica Cichlidae Genetic diversity Genetic differentiation Geometric morphometrics |
| title_short |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| title_full |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| title_fullStr |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| title_full_unstemmed |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| title_sort |
Genética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, Colombia |
| dc.creator.fl_str_mv |
Castaño Tenorio, Isaí |
| dc.contributor.advisor.none.fl_str_mv |
Márquez Fernández, Edna Judith |
| dc.contributor.author.none.fl_str_mv |
Castaño Tenorio, Isaí |
| dc.contributor.researchgroup.spa.fl_str_mv |
Biotecnología Animal |
| dc.contributor.orcid.spa.fl_str_mv |
Castaño Tenorio, Isaí [0000-0003-4158-5159] |
| dc.subject.ddc.spa.fl_str_mv |
570 - Biología::576 - Genética y evolución |
| topic |
570 - Biología::576 - Genética y evolución Caquetaia kraussii - Investigaciones - Colombia Cichlidae - Investigaciones - Colombia Peces - Investigaciones - Colombia Morfometría - Investigaciones - Colombia Diversidad genética - Investigaciones - Colombia Cichlidae Diversidad genética Diferenciación genética Morfometría geométrica Cichlidae Genetic diversity Genetic differentiation Geometric morphometrics |
| dc.subject.agrovoc.none.fl_str_mv |
Caquetaia kraussii - Investigaciones - Colombia Cichlidae - Investigaciones - Colombia Peces - Investigaciones - Colombia Morfometría - Investigaciones - Colombia Diversidad genética - Investigaciones - Colombia |
| dc.subject.proposal.spa.fl_str_mv |
Cichlidae Diversidad genética Diferenciación genética Morfometría geométrica |
| dc.subject.proposal.eng.fl_str_mv |
Cichlidae Genetic diversity Genetic differentiation Geometric morphometrics |
| description |
Ilustraciones, mapas |
| publishDate |
2024 |
| dc.date.accessioned.none.fl_str_mv |
2024-07-02T13:45:57Z |
| dc.date.available.none.fl_str_mv |
2024-07-02T13:45:57Z |
| dc.date.issued.none.fl_str_mv |
2024 |
| dc.type.spa.fl_str_mv |
Trabajo de grado - Maestría |
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info:eu-repo/semantics/masterThesis |
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info:eu-repo/semantics/acceptedVersion |
| dc.type.content.spa.fl_str_mv |
Text |
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http://purl.org/redcol/resource_type/TM |
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acceptedVersion |
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https://repositorio.unal.edu.co/handle/unal/86336 |
| dc.identifier.instname.spa.fl_str_mv |
Universidad Nacional de Colombia |
| dc.identifier.reponame.spa.fl_str_mv |
Repositorio Institucional Universidad Nacional de Colombia |
| dc.identifier.repourl.spa.fl_str_mv |
https://repositorio.unal.edu.co/ |
| url |
https://repositorio.unal.edu.co/handle/unal/86336 https://repositorio.unal.edu.co/ |
| identifier_str_mv |
Universidad Nacional de Colombia Repositorio Institucional Universidad Nacional de Colombia |
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spa |
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spa |
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LaReferencia |
| dc.relation.references.spa.fl_str_mv |
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J., & Winemiller, K. O. (2019). Impacts of hydroelectric dams on fishes and fisheries in tropical rivers through the lens of functional traits. Current Opinion in Environmental Sustainability, 37, 28–40. https://doi.org/10.1016/j.cosust.2019.04.009 Arbour, J. H., Montaña, C. G., Winemiller, K. O., Pease, A. A., Soria-Barreto, M., Cochran-Biederman, J. L., & López-Fernández, H. (2020). Macroevolutionary analyses indicate that repeated adaptive shifts towards predatory diets affect functional diversity in Neotropical cichlids. Biological Journal of the Linnean Society, 129(4), 844–861. https://doi.org/10.1093/biolinnean/blaa001 Ardón, D. A., McMahan, C. D., Velázquez-Velázquez, E., & Matamoros, W. A. (2022). Testing spatial and environmental factors to explain body shape variation in the widespread Central American Blackbelt cichlid Vieja maculicauda (Teleostei: Cichlidae). Neotropical Ichthyology, 20(2), 1-14. https://doi.org/10.1590/1982-0224-2021-0139 Arnqvist, G., & Martensson, T. (1998). Measurement Error in Geometric Morphometrics: Empirical Strategies to Assess and Reduce its Impact on Measures of shape*. Acta Zoologica Academiae Scientiarum Hungaricae, 44(2), 73-96. Baggio, R. A., Araujo, S. B. L., Ayllón, D., & Boeger, W. A. (2018). Dams cause genetic homogenization in populations of fish that present homing behavior: Evidence from a demogenetic individual-based model. Ecological Modelling, 384, 209–220. https://doi.org/10.1016/j.ecolmodel.2018.06.019 Balshine, S., & Abate, M. E. (2021). Parental Care in Cichlids Fishes. In: Abate, M. E. & Noakes D. L. G. (Eds). The Behavior, Ecology and Evolution of Cichlid Fishes; Volume 40. (pp. 541-586). Springer. https://doi.org/https://doi.org/10.1007/978-94-024-2080-7 Barbarossa, V., Schmitt, R. J. P., Huijbregts, M. A. J., Zarfl, C., King, H., & Schipper, A. M. (2020). Impacts of current and future large dams on the geographic range connectivity of freshwater fish worldwide. Proceedings of the National Academy of Sciences of the United States of America, 117(7), 3648–3655. https://doi.org/10.1073/pnas.1912776117 Barlow, G. W. (2000). The cichlid fishes: nature’s grand experiment in evolution. Perseus, Cambridge, MA Barrientos-Villalobos, J., Schmitter-Soto, J. J., & De Los Monteros, A. J. E. (2018). Several Subspecies or Phenotypic Plasticity? A Geometric Morphometric and Molecular Analysis of Variability of the Mayan Cichlid Mayaheros urophthalmus in the Yucatan. Copeia, 106(2), 268–278. https://doi.org/10.1643/CI-17-657 Baudouin, L., & Lebrun, P. (2001). An Operational Bayesian Approach for the Identification of Sexually Reproduced Cross Fertilized Populations Using Molecular Markers. Acta Horticulturae, 546, 81–93. https://doi.org/10.17660/actahortic.2001.546.5 Beatty, S. J., Morgan, D. L., Keleher, J., Allen, M. G., & Sarre, G. A. (2013). The tropical south American cichlid, Geophagus brasiliensis in Mediterranean climatic south-western Australia. 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Sympatric and Allopatric Diversification in the adaptive Radiations of Midas Cichlids in Nicaraguan Lakes. In: Abate, M. E. & Noakes D. L. G. (Eds). The Behavior, Ecology and Evolution of Cichlid Fishes; Volume 40. (pp. 175-216). Springer. https://doi.org/https://doi.org/10.1007/978-94-024-2080-7 Toro-Ibacache, M. V., Manriquez-Soto, G., & Suazo-Galdames, I. (2010). Geometric morphometrics and the study of biologic shapes: From descriptive to quantitative morphology. International Journal of Morphology, 28(4), 977–990. https://doi.org/10.4067/s0717-95022010000400001 Turan, C., Oral, M., Öztürk, B., & Düzgüneş, E. (2006). Morphometric and meristic variation between stocks of Bluefish (Pomatomus saltatrix) in the Black, Marmara, Aegean and northeastern Mediterranean Seas. Fisheries Research, 79(1–2), 139–147. https://doi.org/10.1016/j.fishres.2006.01.015 Valderrama-Barco, M., Escobar-Cardona, J. L., Pardo, R., Toro, M., Gutiérrez, J. C., & López-Casas, S. (2020). 5.Servicios ecosistémicos generados por los peces de la cuenca del río Magdalena, Colombia. En: Jiménez-Segura, L. F. y Lasso, C. A. (Eds.). Peces de la cuenca del río magdalena, Colombia: diversidad, uso, estado de conservación y manejo (pp. 205-235). Bogotá, D. C. (Colombia): Instituto de Investigación de Recursos Biológicos Alexander von Humboldt. http://hdl.handle.net/20.500.11761/35752 Van Rijssel, J. C., de Jong, R. C. M., Kishe, M. A. & Witte, F. (2021) Rapid Evolutionary Responses in Cichlids: Genetics of Adaptation, Morphology and Taxonomic Implications. In: Abate, M. E. & Noakes D. L. G. (Eds). The Behavior, Ecology and Evolution of Cichlid Fishes; Volume 40. (pp. 247-283). Springer. https://doi.org/https://doi.org/10.1007/978-94-024-2080-7 Wagner, C. E., Harmon, L. J., & Seehausen, O. (2012). Ecological opportunity and sexual selection together predict adaptive radiation. Nature, 487(7407), 366–369. https://doi.org/10.1038/nature11144 Wagner, C. (2021). 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Elsevier. https://doi.org/10.1016/b978-0-12-386903-6.00002-2 Zelditch, M. L., Swiderski, D. L., & Sheets, H. D. (2012c). The Thin-plate Spline. In Geometric Morphometrics for Biologists (pp. 103–132). Elsevier. https://doi.org/10.1016/b978-0-12-386903-6.00005-8 Zimmerman, S. J., Aldridge, C. L., & Oyler-Mccance, S. J. (2020). An empirical comparison of population genetic analyses using microsatellite and SNP data for a species of conservation concern. BMC Genomics, 21(382), 1-16. https://doi.org/10.1186/s12864-020-06783-9 |
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Atribución-NoComercial 4.0 Internacionalhttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Márquez Fernández, Edna Judith011312b6f155d73475ea27a399444463Castaño Tenorio, Isaí3d0d0b4f9c64e2c7e94ac9050b26c4c6Biotecnología AnimalCastaño Tenorio, Isaí [0000-0003-4158-5159]2024-07-02T13:45:57Z2024-07-02T13:45:57Z2024https://repositorio.unal.edu.co/handle/unal/86336Universidad Nacional de ColombiaRepositorio Institucional Universidad Nacional de Colombiahttps://repositorio.unal.edu.co/Ilustraciones, mapasCichlidae constituye una de las familias de peces más diversas que han llamado la atención debido a sus respuestas adaptativas y la diversificación en los ambientes que habitan. Caquetaia kraussii, una especie de cíclido endémica de Colombia se utilizó como modelo en este estudio para determinar su estado genético y dilucidar las bases de su divergencia morfológica debido a su presencia en el área de influencia en el proyecto hidroeléctrico Ituango. Mediante el uso de 16 loci microsatélites especie-específicos, altamente polimórficos desarrollados de novo en este estudio, se estimó la diversidad y diferenciación genética en 403 individuos sectorizados geográficamente en poblaciones naturales en el área de influencia del proyecto hidroeléctrico Ituango, y en una población en cautiverio durante los años 2020 y 2022. Un subgrupo de 241 individuos se sometió a análisis de morfometría geométrica para determinar los efectos genéticos, ambientales y ontogénicos en la variación fenotípica de estas poblaciones. Caquetaia kraussii exhibe altos niveles de diversidad genética (Ho: 0.562-0.885; He: 0.583-0.884) comparada con el promedio de cíclidos neotropicales. Además, se observó una estructuración espacial en cuatro grupos genéticos; dos grupos naturales corriente arriba y corriente abajo de la desembocadura del río Nechí, y dos grupos posiblemente conformados por efecto fundador en la zona del embalse y en una piscícola de la región. Los cuatro grupos genéticos muestran evidencias de cuellos de botella reciente, pero solo los dos grupos naturales tienen números efectivos poblacionales que sugieren su permanencia a largo plazo. Además, los resultados morfométricos indican que la talla, la genética y el ambiente influencian la conformación corporal de la especie. La información generada en este estudio puede contribuir a la predicción de cambios genéticos y fenotípicos poblacionales en respuesta a alteraciones antropogénicas que afecten la eco-hidrología de las cuencas que habitan, información útil en programas de manejo y conservación de la especie. (Tomado de la fuente)Cichlidae constitutes one of the most diverse fish families, which has drawn attention due to its adaptive responses and diversification in the environments they inhabit. Caquetaia kraussii, a species of cichlid endemic to Colombia, was used as a model in this study to determine its genetic status and elucidate the basis of its morphological divergence because of its presence in the influence area of the Ituango hydroelectric project. Using 16 highly polymorphic, species-specific microsatellite loci developed de novo in this study, the genetic diversity and differentiation were estimated in 403 individuals geographically segmented into natural populations within the influence area of the Ituango hydroelectric project, and in a captive population between the years 2020 and 2022. A subgroup of 241 individuals underwent geometric morphometric analysis to determine the genetic, environmental, and ontogenetic effects on the phenotypic variation in these populations. Caquetaia kraussii exhibits high levels of genetic diversity (Ho: 0.562-0.885; He: 0.583-0.884) compared to the average of neotropical cichlids and a spatial structuring into four genetic groups: two natural groups upstream and downstream of the Nechí river mouth, and two groups possibly formed by founder effects in the reservoir area and a fish farm in the region. The four genetic groups show evidence of recent bottlenecks, but only the two natural groups have effective population sizes suggesting their long-term permanence. Additionally, the results indicate that size, genetics, and the environment influence the species' body shape. The information generated in this study can contribute to predicting population-level genetic and phenotypic changes in response to anthropogenic alterations affecting the eco-hydrology of the habitats they inhabit, providing valuable insights for species management and conservation programsMaestríaMagíster en Ciencias - BiotecnologíaBiotecnología.Sede Medellín104 páginasapplication/pdfspaUniversidad Nacional de ColombiaMedellín - Ciencias - Maestría en Ciencias - BiotecnologíaFacultad de CienciasMedellín, ColombiaUniversidad Nacional de Colombia - Sede Medellín570 - Biología::576 - Genética y evoluciónCaquetaia kraussii - Investigaciones - ColombiaCichlidae - Investigaciones - ColombiaPeces - Investigaciones - ColombiaMorfometría - Investigaciones - ColombiaDiversidad genética - Investigaciones - ColombiaCichlidaeDiversidad genéticaDiferenciación genéticaMorfometría geométricaCichlidaeGenetic diversityGenetic differentiationGeometric morphometricsGenética poblacional y variación fenotípica del cíclido Caquetaia kraussii (Steindachner, 1878) en la cuenca media y baja del río Cauca, ColombiaPopulation genetic and phenotypic variation of the cichlid Caquetaia kraussii (Steindachner, 1878) in the middle and low basin of the Cauca River, ColombiaTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/acceptedVersionTexthttp://purl.org/redcol/resource_type/TMColombiaLaReferenciaAbate, M. E., & Noakes, D. L. G. (2021). Chance, Choice, and Cichlids. In: Abate, M. E. & Noakes D. L. G. (Eds). The Behavior, Ecology and Evolution of Cichlid Fishes; Volume 40. (pp. 1-11). Springer. https://doi.org/https://doi.org/10.1007/978-94-024-2080-7Abdul-Muneer, P. M. (2014). Application of Microsatellite Markers in Conservation Genetics and Fisheries Management: Recent Advances in Population Structure Analysis and Conservation Strategies. Genetics Research International, 2014, 1–11. https://doi.org/10.1155/2014/691759Adams, D. C., Rohlf, F. J., & Slice, D. E. (2004). Geometric morphometrics: Ten years of progress following the ‘revolution.’ Italian Journal of Zoology, 71(1), 5–16. https://doi.org/10.1080/11250000409356545Agostinho, A. A., Pelicice, F. M., & Gomes, L. C. (2008). Dams and the fish fauna of the Neotropical region: Impacts and management related to diversity and fisheries. Brazilian Journal of Biology, 68(4), 1119–1132. https://doi.org/10.1590/S1519-69842008000500019Agostinho, A. A., Ortega, J. C.G., Bailly, D., da Graca, W. J., Pelicice, F. M., & Júlio H.F. (2021). Introduced Cichlids in the Americas: Distribution Patterns, Invasion Ecology, and Impacts. In: Abate, M. E. & Noakes D. L. G. (Eds). The Behavior, Ecology and Evolution of Cichlid Fishes; Volume 40. (pp. 313-361). Springer. https://doi.org/https://doi.org/10.1007/978-94-024-2080-7Akin, D. R., & Geheber, A. D. (2020). Conforming to the status flow: The influence of altered habitat on fish body-shape characteristics. Freshwater Biology, 65(11), 1883–1893. https://doi.org/10.1111/fwb.13585Alarcón-Durán, I., Castillo-Rivera, M. A., Figueroa-Lucero, G., Arroyo-Cabrales, J., & Barriga-Sosa, I. de los Á. (2017). Diversidad morfológica en 6 poblaciones del pescado blanco Chirostoma humboldtianum. Revista Mexicana de Biodiversidad, 88(1), 207–214. https://doi.org/10.1016/j.rmb.2017.01.018Albert, J. S., & Reis, R. E. (2011). Historical Biogeography of Neotropical Freshwater Fishes (1st ed.). University of California Press. https://doi.org/10.1111/j.1095-8312.2011.01766.xAlda, F., Ludt, W. B., Elías, D. J., McMahan, C. D., & Chakrabarty, P. (2021). Comparing Ultraconserved Elements and Exons for Phylogenomic Analyses of Middle American Cichlids: When Data Agree to Disagree. Genome Biology and Evolution, 13(8), 1-19 https://doi.org/10.1093/gbe/evab161Allendorf, F. W., Hohenlohe, P. A., & Luikart, G. (2010). Genomics and the future of conservation genetics. Nature Reviews Genetics, 11(10), 697–709. https://doi.org/10.1038/nrg2844Alonso, J.C., Escobar, F.D., Polo, C.J., & Puentes, V. (2014). Aguas continentales. En: Puentes, V., Escobar, F. D., Polo, C. J., & Alonso, J. C (Eds.). Estado de los Principales Recursos Pesqueros de Colombia, 2014. Serie Recursos Pesqueros de Colombia-AUNAP (pp 169-170). 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An empirical comparison of population genetic analyses using microsatellite and SNP data for a species of conservation concern. BMC Genomics, 21(382), 1-16. https://doi.org/10.1186/s12864-020-06783-9EstudiantesInvestigadoresMaestrosLICENSElicense.txtlicense.txttext/plain; charset=utf-85879https://repositorio.unal.edu.co/bitstream/unal/86336/1/license.txteb34b1cf90b7e1103fc9dfd26be24b4aMD51ORIGINAL1020458754.2024.pdf1020458754.2024.pdfTesis de Maestría en Ciencias - Biotecnologíaapplication/pdf2158651https://repositorio.unal.edu.co/bitstream/unal/86336/2/1020458754.2024.pdf2fa9ee2e2e5aa2fe87de0b9911bdc230MD52THUMBNAIL1020458754.2024.pdf.jpg1020458754.2024.pdf.jpgGenerated Thumbnailimage/jpeg5060https://repositorio.unal.edu.co/bitstream/unal/86336/3/1020458754.2024.pdf.jpg5933f4aa91d587972192a6124ec26693MD53unal/86336oai:repositorio.unal.edu.co:unal/863362024-07-02 23:05:03.794Repositorio Institucional Universidad Nacional de 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