Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna
The family Neritidae has representatives in tropical and subtropical regions that occur in a variety of environments, and its known fossil record dates back to the late Cretaceous. However there have been few studies of molecular phylogeny in this family. We performed a phylogenetic reconstruction o...
- Autores:
-
Quintero Galvis, Julián Fernando
Castro, Lyda Raquel
- Tipo de recurso:
- Article of journal
- Fecha de publicación:
- 2013
- Institución:
- Universidad Nacional de Colombia
- Repositorio:
- Universidad Nacional de Colombia
- Idioma:
- spa
- OAI Identifier:
- oai:repositorio.unal.edu.co:unal/71974
- Acceso en línea:
- https://repositorio.unal.edu.co/handle/unal/71974
http://bdigital.unal.edu.co/36446/
http://bdigital.unal.edu.co/36446/2/
- Palabra clave:
- Ciencias Biologicas
Sistematica
Invertebrados
Moluscos
Colombian Caribbean
mitochondrial genes
mtDNA
Nerita
Neritina
radiation
Caribe colombiano
genoma mitocondrial
ADNmt
Nerita
Neritina
radiación.
- Rights
- openAccess
- License
- Atribución-NoComercial 4.0 Internacional
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Universidad Nacional de Colombia |
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|
dc.title.spa.fl_str_mv |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
title |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
spellingShingle |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna Ciencias Biologicas Sistematica Invertebrados Moluscos Colombian Caribbean mitochondrial genes mtDNA Nerita Neritina radiation Caribe colombiano genoma mitocondrial ADNmt Nerita Neritina radiación. |
title_short |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
title_full |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
title_fullStr |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
title_full_unstemmed |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
title_sort |
Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna |
dc.creator.fl_str_mv |
Quintero Galvis, Julián Fernando Castro, Lyda Raquel |
dc.contributor.author.spa.fl_str_mv |
Quintero Galvis, Julián Fernando Castro, Lyda Raquel |
dc.subject.proposal.spa.fl_str_mv |
Ciencias Biologicas Sistematica Invertebrados Moluscos Colombian Caribbean mitochondrial genes mtDNA Nerita Neritina radiation Caribe colombiano genoma mitocondrial ADNmt Nerita Neritina radiación. |
topic |
Ciencias Biologicas Sistematica Invertebrados Moluscos Colombian Caribbean mitochondrial genes mtDNA Nerita Neritina radiation Caribe colombiano genoma mitocondrial ADNmt Nerita Neritina radiación. |
description |
The family Neritidae has representatives in tropical and subtropical regions that occur in a variety of environments, and its known fossil record dates back to the late Cretaceous. However there have been few studies of molecular phylogeny in this family. We performed a phylogenetic reconstruction of the family Neritidae using the COI (722 bp) and the 16S rRNA (559 bp) regions of the mitochondrial genome. Neighbor-joining, maximum parsimony and Bayesian inference were performed.The best phylogenetic reconstruction was obtained using the COI region, and we consider it an appropriate marker for phylogenetic studies within the group. Consensus analysis (COI +16S rRNA) generally obtained the same tree topologies and confirmed that the genus Nerita is monophyletic. The consensus analysis using parsimony recovered a monophyletic group consisting of the genera Neritina, Septaria, Theodoxus, Puperita, and Clithon, while in the Bayesian analyses Theodoxus is separated from the other genera. The phylogenetic status of the species from the genus Nerita from the Colombian Caribbean generated in this study was consistent with that reported for the genus in previous studies. In the resulting consensus tree obtained using maximum parsimony, we included information on habitat type for each species, to map the evolution by habitat. Species of the family Neritidae possibly have their origin in marine environments, which is consistent with conclusions from previous reports based on anatomical studies.Filogenia molecular de la familia Neritidae (Gastropoda: Neritimorpha) con base en los genes mitocondriales citocromo oxidasa I (COI) y 16S rRNALa familia Neritidae cuenta con representantes en regiones tropicales y subtropicales adaptadas a diferentes ambientes, con un registro fósil que data para finales del Cretáceo. Sin embargo no se han realizado estudios de filogenia molecular en la familia. En este estudio se realizó una reconstrucción filogenética de la familia Neritidae utilizando las regiones COI (722 pb) y 16S rRNA (559 pb) del genoma mitocondrial. Se realizaron análisis de distancias de Neighbor-Joining, Máxima Parsimonia e Inferencia Bayesiana. La mejor reconstrucción filogenética fue mediante la región COI, considerándola un marcador apropiado para realizar estudios filogenéticos dentro del grupo. El consenso de las relaciones filogenéticas (COI+16S rRNA) permitió confirmar que el género Nerita es monofilético. El consenso del análisis de parsimonia reveló un grupo monofilético formado por los géneros Neritina, Septaria, Theodoxus, Puperita y Clithon, mientras que en el análisis bayesiano Theodoxus se encuentra separado de los otros géneros. El resultado en las especies del género Nerita del Caribe colombiano fue consistente con lo reportado para el género en estudios previos. En el árbol resultante del análisis de parsimonia se sobrepuso la |
publishDate |
2013 |
dc.date.issued.spa.fl_str_mv |
2013 |
dc.date.accessioned.spa.fl_str_mv |
2019-07-03T14:47:15Z |
dc.date.available.spa.fl_str_mv |
2019-07-03T14:47:15Z |
dc.type.spa.fl_str_mv |
Artículo de revista |
dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 |
dc.type.coarversion.spa.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.content.spa.fl_str_mv |
Text |
dc.type.redcol.spa.fl_str_mv |
http://purl.org/redcol/resource_type/ART |
format |
http://purl.org/coar/resource_type/c_6501 |
status_str |
publishedVersion |
dc.identifier.uri.none.fl_str_mv |
https://repositorio.unal.edu.co/handle/unal/71974 |
dc.identifier.eprints.spa.fl_str_mv |
http://bdigital.unal.edu.co/36446/ http://bdigital.unal.edu.co/36446/2/ |
url |
https://repositorio.unal.edu.co/handle/unal/71974 http://bdigital.unal.edu.co/36446/ http://bdigital.unal.edu.co/36446/2/ |
dc.language.iso.spa.fl_str_mv |
spa |
language |
spa |
dc.relation.spa.fl_str_mv |
http://revistas.unal.edu.co/index.php/actabiol/article/view/37173 |
dc.relation.ispartof.spa.fl_str_mv |
Universidad Nacional de Colombia Revistas electrónicas UN Acta Biológica Colombiana Acta Biológica Colombiana |
dc.relation.ispartofseries.none.fl_str_mv |
Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 1900-1649 0120-548X |
dc.relation.references.spa.fl_str_mv |
Quintero Galvis, Julián Fernando and Castro, Lyda Raquel (2013) Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna. Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 1900-1649 0120-548X . |
dc.rights.spa.fl_str_mv |
Derechos reservados - Universidad Nacional de Colombia |
dc.rights.coar.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.license.spa.fl_str_mv |
Atribución-NoComercial 4.0 Internacional |
dc.rights.uri.spa.fl_str_mv |
http://creativecommons.org/licenses/by-nc/4.0/ |
dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Atribución-NoComercial 4.0 Internacional Derechos reservados - Universidad Nacional de Colombia http://creativecommons.org/licenses/by-nc/4.0/ http://purl.org/coar/access_right/c_abf2 |
eu_rights_str_mv |
openAccess |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Universidad Nacional de Colombia, Facultad de Ciencias, Departamento de Biología |
institution |
Universidad Nacional de Colombia |
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Atribución-NoComercial 4.0 InternacionalDerechos reservados - Universidad Nacional de Colombiahttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Quintero Galvis, Julián Fernandob491758f-b0da-4b61-99db-b9a1fd6e8ea3300Castro, Lyda Raquele46a8802-da5e-46bc-bda5-cb43c9145b033002019-07-03T14:47:15Z2019-07-03T14:47:15Z2013https://repositorio.unal.edu.co/handle/unal/71974http://bdigital.unal.edu.co/36446/http://bdigital.unal.edu.co/36446/2/The family Neritidae has representatives in tropical and subtropical regions that occur in a variety of environments, and its known fossil record dates back to the late Cretaceous. However there have been few studies of molecular phylogeny in this family. We performed a phylogenetic reconstruction of the family Neritidae using the COI (722 bp) and the 16S rRNA (559 bp) regions of the mitochondrial genome. Neighbor-joining, maximum parsimony and Bayesian inference were performed.The best phylogenetic reconstruction was obtained using the COI region, and we consider it an appropriate marker for phylogenetic studies within the group. Consensus analysis (COI +16S rRNA) generally obtained the same tree topologies and confirmed that the genus Nerita is monophyletic. The consensus analysis using parsimony recovered a monophyletic group consisting of the genera Neritina, Septaria, Theodoxus, Puperita, and Clithon, while in the Bayesian analyses Theodoxus is separated from the other genera. The phylogenetic status of the species from the genus Nerita from the Colombian Caribbean generated in this study was consistent with that reported for the genus in previous studies. In the resulting consensus tree obtained using maximum parsimony, we included information on habitat type for each species, to map the evolution by habitat. Species of the family Neritidae possibly have their origin in marine environments, which is consistent with conclusions from previous reports based on anatomical studies.Filogenia molecular de la familia Neritidae (Gastropoda: Neritimorpha) con base en los genes mitocondriales citocromo oxidasa I (COI) y 16S rRNALa familia Neritidae cuenta con representantes en regiones tropicales y subtropicales adaptadas a diferentes ambientes, con un registro fósil que data para finales del Cretáceo. Sin embargo no se han realizado estudios de filogenia molecular en la familia. En este estudio se realizó una reconstrucción filogenética de la familia Neritidae utilizando las regiones COI (722 pb) y 16S rRNA (559 pb) del genoma mitocondrial. Se realizaron análisis de distancias de Neighbor-Joining, Máxima Parsimonia e Inferencia Bayesiana. La mejor reconstrucción filogenética fue mediante la región COI, considerándola un marcador apropiado para realizar estudios filogenéticos dentro del grupo. El consenso de las relaciones filogenéticas (COI+16S rRNA) permitió confirmar que el género Nerita es monofilético. El consenso del análisis de parsimonia reveló un grupo monofilético formado por los géneros Neritina, Septaria, Theodoxus, Puperita y Clithon, mientras que en el análisis bayesiano Theodoxus se encuentra separado de los otros géneros. El resultado en las especies del género Nerita del Caribe colombiano fue consistente con lo reportado para el género en estudios previos. En el árbol resultante del análisis de parsimonia se sobrepuso laapplication/pdfspaUniversidad Nacional de Colombia, Facultad de Ciencias, Departamento de Biologíahttp://revistas.unal.edu.co/index.php/actabiol/article/view/37173Universidad Nacional de Colombia Revistas electrónicas UN Acta Biológica ColombianaActa Biológica ColombianaActa Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 1900-1649 0120-548XQuintero Galvis, Julián Fernando and Castro, Lyda Raquel (2013) Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrna. Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 Acta Biológica Colombiana; Vol. 18, núm. 2 (2013); 307-318 1900-1649 0120-548X .Molecular phylogeny of the neritidae (gastropoda: neritimorpha) based on the mitochondrial genes cytochrome oxidase i (coi) and 16s rrnaArtículo de revistainfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/ARTCiencias BiologicasSistematicaInvertebradosMoluscosColombian Caribbeanmitochondrial genesmtDNANeritaNeritinaradiationCaribe colombianogenoma mitocondrialADNmtNeritaNeritinaradiación.ORIGINAL37173-160317-1-SP.pdfapplication/pdf522017https://repositorio.unal.edu.co/bitstream/unal/71974/1/37173-160317-1-SP.pdf5ec5d9a10c005d66d5189ef11e450926MD5137173-172956-3-PB.pdfapplication/pdf1562939https://repositorio.unal.edu.co/bitstream/unal/71974/2/37173-172956-3-PB.pdf13ec8f837bb712b3fece76f78520d95dMD52THUMBNAIL37173-160317-1-SP.pdf.jpg37173-160317-1-SP.pdf.jpgGenerated Thumbnailimage/jpeg6365https://repositorio.unal.edu.co/bitstream/unal/71974/3/37173-160317-1-SP.pdf.jpgd802880d5c61a89d23d9cfcb034df291MD5337173-172956-3-PB.pdf.jpg37173-172956-3-PB.pdf.jpgGenerated Thumbnailimage/jpeg9507https://repositorio.unal.edu.co/bitstream/unal/71974/4/37173-172956-3-PB.pdf.jpg822d478b6b135be808bf0e80c1a57747MD54unal/71974oai:repositorio.unal.edu.co:unal/719742023-06-21 23:03:25.24Repositorio Institucional Universidad Nacional de Colombiarepositorio_nal@unal.edu.co |