Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca
ilustraciones, diagramas, fotografías, mapas, tablas
- Autores:
-
Galindo Acosta, Camilo Andrés
- Tipo de recurso:
- Fecha de publicación:
- 2021
- Institución:
- Universidad Nacional de Colombia
- Repositorio:
- Universidad Nacional de Colombia
- Idioma:
- spa
- OAI Identifier:
- oai:repositorio.unal.edu.co:unal/81453
- Palabra clave:
- 570 - Biología::576 - Genética y evolución
Avícola
Alphitobius diaperinus
Carcinops troglodytes
Citocromo Oxidasa I
16sRNA
Enterobacteriaceae
Salmonella enterica
Escherichia coli
Staphylococcaceae
Poultry
Alphitobius diaperinus
Carcinops troglodytes
Cytochrome Oxidase I
16sRNA
Enterobacteriaceae
Salmonella enterica
Escherichia coli
Staphylococcaceae
Biología molecular
Veterinaria
Ave de corral
Biología celular
Molecular biology
- Rights
- openAccess
- License
- Atribución-SinDerivadas 4.0 Internacional
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oai:repositorio.unal.edu.co:unal/81453 |
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UNACIONAL2 |
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Universidad Nacional de Colombia |
repository_id_str |
|
dc.title.spa.fl_str_mv |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
dc.title.translated.eng.fl_str_mv |
Molecular identification through the COI gene of beetles of sanitary importance in the poultry region of Fusagasugá, Cundinamarca |
title |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
spellingShingle |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca 570 - Biología::576 - Genética y evolución Avícola Alphitobius diaperinus Carcinops troglodytes Citocromo Oxidasa I 16sRNA Enterobacteriaceae Salmonella enterica Escherichia coli Staphylococcaceae Poultry Alphitobius diaperinus Carcinops troglodytes Cytochrome Oxidase I 16sRNA Enterobacteriaceae Salmonella enterica Escherichia coli Staphylococcaceae Biología molecular Veterinaria Ave de corral Biología celular Molecular biology |
title_short |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
title_full |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
title_fullStr |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
title_full_unstemmed |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
title_sort |
Identificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, Cundinamarca |
dc.creator.fl_str_mv |
Galindo Acosta, Camilo Andrés |
dc.contributor.advisor.none.fl_str_mv |
Vargas Duarte, Jimmy Jolman Gómez Ramírez, Arlen Patricia |
dc.contributor.author.none.fl_str_mv |
Galindo Acosta, Camilo Andrés |
dc.contributor.researchgroup.spa.fl_str_mv |
Control Genetico en Salud Animal |
dc.subject.ddc.spa.fl_str_mv |
570 - Biología::576 - Genética y evolución |
topic |
570 - Biología::576 - Genética y evolución Avícola Alphitobius diaperinus Carcinops troglodytes Citocromo Oxidasa I 16sRNA Enterobacteriaceae Salmonella enterica Escherichia coli Staphylococcaceae Poultry Alphitobius diaperinus Carcinops troglodytes Cytochrome Oxidase I 16sRNA Enterobacteriaceae Salmonella enterica Escherichia coli Staphylococcaceae Biología molecular Veterinaria Ave de corral Biología celular Molecular biology |
dc.subject.proposal.spa.fl_str_mv |
Avícola |
dc.subject.proposal.none.fl_str_mv |
Alphitobius diaperinus Carcinops troglodytes Citocromo Oxidasa I 16sRNA Enterobacteriaceae Salmonella enterica Escherichia coli Staphylococcaceae |
dc.subject.proposal.eng.fl_str_mv |
Poultry Alphitobius diaperinus Carcinops troglodytes Cytochrome Oxidase I 16sRNA Enterobacteriaceae Salmonella enterica Escherichia coli Staphylococcaceae |
dc.subject.unesco.spa.fl_str_mv |
Biología molecular Veterinaria Ave de corral Biología celular |
dc.subject.unesco.eng.fl_str_mv |
Molecular biology |
description |
ilustraciones, diagramas, fotografías, mapas, tablas |
publishDate |
2021 |
dc.date.issued.none.fl_str_mv |
2021-04 |
dc.date.accessioned.none.fl_str_mv |
2022-04-08T20:03:53Z |
dc.date.available.none.fl_str_mv |
2022-04-08T20:03:53Z |
dc.type.spa.fl_str_mv |
Trabajo de grado - Maestría |
dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/masterThesis |
dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/acceptedVersion |
dc.type.content.spa.fl_str_mv |
Text |
dc.type.redcol.spa.fl_str_mv |
http://purl.org/redcol/resource_type/TM |
status_str |
acceptedVersion |
dc.identifier.uri.none.fl_str_mv |
https://repositorio.unal.edu.co/handle/unal/81453 |
dc.identifier.instname.spa.fl_str_mv |
Universidad Nacional de Colombia |
dc.identifier.reponame.spa.fl_str_mv |
Repositorio Institucional Universidad Nacional de Colombia |
dc.identifier.repourl.spa.fl_str_mv |
https://repositorio.unal.edu.co/ |
url |
https://repositorio.unal.edu.co/handle/unal/81453 https://repositorio.unal.edu.co/ |
identifier_str_mv |
Universidad Nacional de Colombia Repositorio Institucional Universidad Nacional de Colombia |
dc.language.iso.spa.fl_str_mv |
spa |
language |
spa |
dc.relation.references.spa.fl_str_mv |
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E. (2017). A Hister Beetle Carcinops pumilio (Erichson) (Insecta: Coleoptera: Histeridae: Dendrophilinae: Paromalini). Edis, 2017(1), 13. https://doi.org/10.32473/edis-in1163-2017 Moraes, D. M. C., Andrade, M. A., Duarte, S. C., Bastos, T. S. A., Arnhold, E., Jayme, V. de S., & Nunes, I. A. (2016). Phenotypic and molecular detection of Salmonella sp. on growing, rearing and production phases in a commercial group of laying hens. Pesquisa Veterinaria Brasileira, 36(6), 503–508. https://doi.org/10.1590/S0100-736X2016000600007 Mottet, A., & Tempio, G. (2017). L1 Global poultry production: current state and future outlook and challenges. Mustač, S., Merdic, E., Drvenkar, D., & Skvorc, V. (2016). Distribution of lesser mealworm, Alphitobius diaperinus (coleoptera:Tenebrionidae) in poultry house throughout three successive poultry breeding cycles. Moscenicka Draga. Nei, M., & Kumar, S. (2000). Molecular Evolution and Phylogenetics. New York: Oxford University Press. Nolan, L. K., Barnes, H. J., Vaillancourt, J., Abdul-aziz, T., & Logue, C. M. (2013). Colibacillosis. En Diseases of Poultry: Thirteenth Edition (pp. 751–805). Oakley, B. B., Morales, C. A., Line, J., Berrang, M. E., Meinersmann, R. J., Tillman, G. E., … Seal, B. S. (2013). The Poultry-Associated Microbiome: Network Analysis and Farm-to-Fork Characterizations. PLoS ONE, 8(2). https://doi.org/10.1371/journal.pone.0057190 Olsen, R. H., Bisgaard, M., Christensen, J. P., Kabell, S., & Christensen, H. (2016). Pathology and Molecular Characterization of Escherichia Coli Associated With the Avian Salpingitis-Peritonitis Disease Syndrome . Avian Diseases, 60(1), 1–7. https://doi.org/10.1637/11237-071715-reg.1 Osimani, A., Milanović, V., Garofalo, C., Cardinali, F., Roncolini, A., Sabbatini, R., … Aquilanti, L. (2018). Revealing the microbiota of marketed edible insects through PCR-DGGE, metagenomic sequencing and real-time PCR. International Journal of Food Microbiology, 276(March), 54–62. https://doi.org/10.1016/j.ijfoodmicro.2018.04.013 Payne, L. N., & Venugopal, K. (2000). Neoplastic diseases: Marek’s disease, avian leukosis and reticuloendotheliosis. OIE Revue Scientifique et Technique, 19(2), 544–564. https://doi.org/10.20506/rst.19.2.1226 Pentinsaari, M., Hebert, P. D. N., & Mutanen, M. (2014). Barcoding beetles: A regional survey of 1872 species reveals high identification success and unusually deep interspecific divergences. PLoS ONE, 9(9), e108651. https://doi.org/10.1371/journal.pone.0108651 Pereira, P. R. V. da S., & Almeida, L. M. de. (2001). Chaves para a identificação dos principais Coleoptera (Insecta) associados com produtos armazenados. Revista Brasileira de Zoologia, 18(1), 271–283. https://doi.org/10.1590/s0101-81752001000100031 Petherbridge, L., Brown, A. C., Baigent, S. J., Howes, K., Sacco, M. A., Osterrieder, N., & Nair, V. K. (2004). Oncogenicity of Virulent Marek’s Disease Virus Cloned as Bacterial Artificial Chromosomes. Journal of Virology, 78(23), 13376–13380. https://doi.org/10.1128/jvi.78.23.13376-13380.2004 Pfeiffer, D., & Axtell, R. (1980). Coleoptera of Poultry Manure in Caged-layer Houses in North Carolina. Environmental Entomology, 9(1), 21–28. https://doi.org/10.1093/ee/9.1.21 Pinto, D. M., Duarte, J., Ribeiro, P., Silveira Júnior, P., & Silveira, P. (2009). Collection of Coleoptera from a poultry farm in Pelotas, Rio Grande do Sul, Brazil. Ciência Rural, 39(2), 319–324. https://doi.org/10.1590/s0103-84782008005000060 Pinto, D. M., Ribeiro, P. B., & Silveira Jr, P. (2010). Comparison of methods to monitor populations of Alphitobius diaperinus (PANZER, 1797) (Coleoptera: Tenebrionidae) in poultry farm, Pelotas, RS, Brazil. Semina: Ciencias Agrarias, 31(2), 295–300. Pinto, D., Ribeiro, P., & Bernardi, E. (2007). 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The Role of Litter Beetles as Potential Reservoir for Salmonella enterica and Thermophilic Campylobacter spp. Between Broiler Flocks. Avian Diseases, 48(1), 9–18. https://doi.org/10.1637/5698 Stafford III, K., Collison, C., Burg, J., & Cloud, J. (1988). Distribution and monitoring lesser mealworms, hide beetles, and other fauna in high-rise, caged-layer poultry houses’. J. Agrie. Entornol., 5(2), 89–102. Templeton, J., De Jong, A., Blackall, P., & Miflin, J. (2006). Survival of Campylobacter spp. in darkling beetles (Alphitobius diaperinus) and their larvae in Australia. Applied and Environmental Microbiology, 72(12), 7909–7911. https://doi.org/10.1128/AEM.01471-06 Teshome, M., Fentahunand, T., & Admassu, B. (2015). Infectious bursal disease (Gumboro disease) in chickens. British Journal of Poultry Sciences, 4(1), 22–28. https://doi.org/10.5829/idosi.bjps.2015.4.1.95172 Tobin, P. C., & Pitts, C. W. (1999). Flotation method for extracting insects from poultry manure samples. 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L., Sheffield, C. L., Poole, T. L., Yu, Z., & Tomberlin, J. K. (2012). Evaluation of Salmonella movement through the gut of the lesser mealworm, Alphitobius diaperinus (Coleoptera: Tenebrionidae). Vector-Borne and Zoonotic Diseases, 12(4), 287–292. https://doi.org/10.1089/vbz.2011.0613 Zhou, Y. ying, Kang, X. long, Meng, C., Xiong, D., Xu, Y., Geng, S. zhong, … Jiao, X. an. (2020). Multiple PCR assay based on the cigR gene for detection of Salmonella spp. and Salmonella Pullorum/Gallinarum identification. Poultry Science, 99(11), 5991–5998. https://doi.org/10.1016/j.psj.2020.07.026 Zurek, L., & Ghosh, A. (2014). Insects represent a link between food animal farms and the urban environment for antibiotic resistance traits. Applied and Environmental Microbiology, 80(12), 3562–3567. https://doi.org/10.1128/AEM.00600-14 |
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Universidad Nacional de Colomboia |
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Bogotá - Ciencias - Maestría en Ciencias - Microbiología |
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Universidad Nacional de Colombia - Sede Bogotá |
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Universidad Nacional de Colombia |
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Atribución-SinDerivadas 4.0 Internacionalhttp://creativecommons.org/licenses/by-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Vargas Duarte, Jimmy Jolmanf69988842efc4f35c25967bd63947f30Gómez Ramírez, Arlen Patriciae0f2ba167dee4ba51c0b3b78cd57c83dGalindo Acosta, Camilo Andrés0d9bb94c888c59d970bf47265f353922Control Genetico en Salud Animal2022-04-08T20:03:53Z2022-04-08T20:03:53Z2021-04https://repositorio.unal.edu.co/handle/unal/81453Universidad Nacional de ColombiaRepositorio Institucional Universidad Nacional de Colombiahttps://repositorio.unal.edu.co/ilustraciones, diagramas, fotografías, mapas, tablasLas principales especies de escarabajos asociados a las instalaciones avícolas son Alphitobius diaperinus, Carcinops pumilio y Carcinops troglodytes y pueden actuar como reservorios y/o vectores de microorganismos. El objetivo de este trabajo fue identificar la población coleópteros presentes en granjas de pollo de engorde en una de las regiones avícolas más importantes del país como lo es Fusagasugá, Cundinamarca. Se tomaron muestras cada 7 días hasta el día 35, se realizó conteo de coleópteros y posteriormente se hizo una clasificación taxonómica y genómica con el uso del gen de ADN mitocondrial (mtDNA) citocromo oxidasa I (COI); también se realizó un estudio de poblaciones bacterianas presentes en A. diaperinus y en cama de los galpones con el uso del gen 16S rRNA. La clasificación taxonómica de los coleópteros dio como más frecuente a A. diaperinus con 95,1% y C. troglodytes con 4,9%. Del gen COI se obtuvo que A. diaperinus tiene una similitud del 98,68% con genes de referencia pertenecientes a la misma especie, C. troglodytes no posee un genoma de referencia con el cual hacer un comparativo, por lo tanto, el gen COI detectado en esta investigación se convierte en el primer reporte para la construcción del genoma de esta especie. El microbioma presente en A. diaperinus dio una alta presencia de bacterias de la familia Enterobacteriaceae, principalmente Salmonella enterica y Escherichia coli. En la cama de la unidad productiva muestreada, la familia con mayor presencia fue Staphylococcaceae. Los resultados de esta investigación corroboran la utilidad de las herramientas moleculares para la caracterización de insectos como complemento a las claves taxonómicas reportadas. Asimismo, los análisis del gen 16S rRNA demuestran la importancia que desempeñan estos coleópteros como reservorios de patógenos de interés en salud pública humana y veterinaria. Esta investigación también se destaca como el primer reporte de secuencias y microbiota de coleópteros asociados a granjas avícolas. (Texto tomado de la fuente)The main species of beetles associated with poultry facilities are Alphitobius diaperinus, Carcinops pumilio and Carcinops troglodytes and can act as reservoirs and / or vectors for microorganisms. The objective of this work was to identify the coleopteran population present in broiler chicken farms in one of the most important poultry regions of the country, such as Fusagasugá, Cundinamarca. Samples were taken every 7 days until day 35, a coleopteran content was made and later a taxonomic and genomic classification was made with the use of the mitochondrial DNA (mtDNA) cytochrome oxidase I (COI) gene; A study of bacterial populations present in A. diaperinus and in the litter of the houses was also carried out with the use of the 16S rRNA gene. The taxonomic classification of coleopterans gave the most frequent A. diaperinus with 95.1% and C. troglodytes with 4.9%. From the COI gene it was obtained that A. diaperinus has a similarity of 98.68% with reference genes belonging to the same species, C. troglodytes does not have a reference genome with which to make a comparison, therefore, the COI gene detected in this research becomes the first report for the construction of the genome of this species. The microbiome present in A. diaperinus gave a high presence of bacteria of the Enterobacteriaceae family, mainly Salmonella enterica and Escherichia coli. In the litter of the sampled productive unit, the family with the highest presence was Staphylococcaceae. The results of this research corroborate the usefulness of molecular tools for the characterization of insects as a complement to the reported taxonomic keys. Likewise, the analysis of the 16S rRNA gene shows the importance that these coleopterans play as reservoirs of pathogens of interest in human and veterinary public health. This research also stands out as the first report of sequences and microbiota of coleopterans associated with poultry farms.MaestríaMagíster en Ciencias - MicrobiologíaBiología molecular de agentes infecciososxx, 127 páginasapplication/pdfspaUniversidad Nacional de ColomboiaBogotá - Ciencias - Maestría en Ciencias - MicrobiologíaInstituto de Biotecnología (IBUN)Facultad de CienciasBogota, ColombiaUniversidad Nacional de Colombia - Sede Bogotá570 - Biología::576 - Genética y evoluciónAvícolaAlphitobius diaperinusCarcinops troglodytesCitocromo Oxidasa I16sRNAEnterobacteriaceaeSalmonella entericaEscherichia coliStaphylococcaceaePoultryAlphitobius diaperinusCarcinops troglodytesCytochrome Oxidase I16sRNAEnterobacteriaceaeSalmonella entericaEscherichia coliStaphylococcaceaeBiología molecularVeterinariaAve de corralBiología celularMolecular biologyIdentificación molecular por medio del Gen COI de escarabajos de importancia sanitaria en la región avícola de Fusagasugá, CundinamarcaMolecular identification through the COI gene of beetles of sanitary importance in the poultry region of Fusagasugá, CundinamarcaTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/acceptedVersionTexthttp://purl.org/redcol/resource_type/TMFusagasugáColombiaAballay, F. 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Applied and Environmental Microbiology, 80(12), 3562–3567. https://doi.org/10.1128/AEM.00600-14EstudiantesInvestigadoresMaestrosORIGINAL80738034.2021.pdf80738034.2021.pdfTesis de Maestría en Ciencias Microbiologíaapplication/pdf5434697https://repositorio.unal.edu.co/bitstream/unal/81453/3/80738034.2021.pdf5c7e40f1e8a88916aae8aaaf8350186bMD53LICENSElicense.txtlicense.txttext/plain; charset=utf-84074https://repositorio.unal.edu.co/bitstream/unal/81453/4/license.txt8153f7789df02f0a4c9e079953658ab2MD54THUMBNAIL80738034.2021.pdf.jpg80738034.2021.pdf.jpgGenerated Thumbnailimage/jpeg5043https://repositorio.unal.edu.co/bitstream/unal/81453/5/80738034.2021.pdf.jpga9feb676528d58823ea348c62e27e0acMD55unal/81453oai:repositorio.unal.edu.co:unal/814532024-08-05 23:10:43.538Repositorio Institucional Universidad Nacional de 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