Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia

Lulo (Solanum quitoense Lam.) is an exotic fruit with major economic importance in the Andean region. It has gained importance in the agricultural sector due to organoleptic and cultivation characteristics. There are not studies on this plant genetic resource in the province of Neira, Boyaca departm...

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Autores:
Morillo Coronado, Ana Cruz
Rodriguez Fagua, Andrea Del Pilar
Morillo Coronado, Yacenia
Tipo de recurso:
Article of journal
Fecha de publicación:
2017
Institución:
Universidad Nacional de Colombia
Repositorio:
Universidad Nacional de Colombia
Idioma:
spa
OAI Identifier:
oai:repositorio.unal.edu.co:unal/61084
Acceso en línea:
https://repositorio.unal.edu.co/handle/unal/61084
http://bdigital.unal.edu.co/59892/
Palabra clave:
55 Ciencias de la tierra / Earth sciences and geology
63 Agricultura y tecnologías relacionadas / Agriculture
Andean fruit
RAM microsatellites
Solanum
variability
Rights
openAccess
License
Atribución-NoComercial 4.0 Internacional
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spelling Atribución-NoComercial 4.0 InternacionalDerechos reservados - Universidad Nacional de Colombiahttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Morillo Coronado, Ana Cruz9cdffc3f-73d5-4435-b409-17b4283aef89300Rodriguez Fagua, Andrea Del Pilar72349824-08d3-4577-a8f5-240238cc16d8300Morillo Coronado, Yaceniaad0cb1fa-72d8-4fd7-a089-6b9628bf7a323002019-07-02T19:53:01Z2019-07-02T19:53:01Z2017-07-01ISSN: 2323-0118https://repositorio.unal.edu.co/handle/unal/61084http://bdigital.unal.edu.co/59892/Lulo (Solanum quitoense Lam.) is an exotic fruit with major economic importance in the Andean region. It has gained importance in the agricultural sector due to organoleptic and cultivation characteristics. There are not studies on this plant genetic resource in the province of Neira, Boyaca department, Colombia. Given these concerns, the aim of this research was to characterize the genetic diversity with random amplified microsatellite markers (RAM). Twenty-one lulo materials were collected in the Soaquira and Sacaneca, Boyaca-Colombia districts to calculate genetic diversity and similarity indices. In addition, the analysis with the Nei-Li coefficient formed three groups at 0.60 similarity level showing a loose distribution of the materials without a relationship with the geographical site or the presence or absence of thorns. The seven RAM markers generated 346 alleles, ranging between 43 and 48 for CT and TG, respectively. The average estimated heterozygosity values ranged from 0.33 for TG and 0.40 for CGA. The average value for all evaluated lulo materials was 0.36, higher than the reported value in other studies on lulo genetic diversity in Colombia. The average Fst value for the 20 evaluated materials was 0.14, showing a moderate genetic differentiation. Overall, the RAM markers identified genetic variability in the study area, the need for levels of subdivision and hierarchization greater than those considered in this research, which would have allowed a better use of the plant genetic diversity present in the lulo materials in the province of Neira-Boyaca, Colombia.application/pdfspaUniversidad Nacional de Colombia - Sede Palmirahttps://revistas.unal.edu.co/index.php/acta_agronomica/article/view/58997Universidad Nacional de Colombia Revistas electrónicas UN Acta AgronómicaActa AgronómicaMorillo Coronado, Ana Cruz and Rodriguez Fagua, Andrea Del Pilar and Morillo Coronado, Yacenia (2017) Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia. Acta Agronómica, 66 (3). pp. 430-435. ISSN 2323-011855 Ciencias de la tierra / Earth sciences and geology63 Agricultura y tecnologías relacionadas / AgricultureAndean fruitRAM microsatellitesSolanumvariabilityCharacterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, ColombiaArtículo de revistainfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/ARTORIGINAL58997-318003-6-PB.pdfapplication/pdf947815https://repositorio.unal.edu.co/bitstream/unal/61084/1/58997-318003-6-PB.pdfa414244f84e3f8025f6785970e548104MD51THUMBNAIL58997-318003-6-PB.pdf.jpg58997-318003-6-PB.pdf.jpgGenerated Thumbnailimage/jpeg8818https://repositorio.unal.edu.co/bitstream/unal/61084/2/58997-318003-6-PB.pdf.jpg6f1844a22452e41ccb2b949adc2cadd1MD52unal/61084oai:repositorio.unal.edu.co:unal/610842023-04-10 23:05:19.555Repositorio Institucional Universidad Nacional de Colombiarepositorio_nal@unal.edu.co
dc.title.spa.fl_str_mv Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
title Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
spellingShingle Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
55 Ciencias de la tierra / Earth sciences and geology
63 Agricultura y tecnologías relacionadas / Agriculture
Andean fruit
RAM microsatellites
Solanum
variability
title_short Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
title_full Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
title_fullStr Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
title_full_unstemmed Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
title_sort Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia
dc.creator.fl_str_mv Morillo Coronado, Ana Cruz
Rodriguez Fagua, Andrea Del Pilar
Morillo Coronado, Yacenia
dc.contributor.author.spa.fl_str_mv Morillo Coronado, Ana Cruz
Rodriguez Fagua, Andrea Del Pilar
Morillo Coronado, Yacenia
dc.subject.ddc.spa.fl_str_mv 55 Ciencias de la tierra / Earth sciences and geology
63 Agricultura y tecnologías relacionadas / Agriculture
topic 55 Ciencias de la tierra / Earth sciences and geology
63 Agricultura y tecnologías relacionadas / Agriculture
Andean fruit
RAM microsatellites
Solanum
variability
dc.subject.proposal.spa.fl_str_mv Andean fruit
RAM microsatellites
Solanum
variability
description Lulo (Solanum quitoense Lam.) is an exotic fruit with major economic importance in the Andean region. It has gained importance in the agricultural sector due to organoleptic and cultivation characteristics. There are not studies on this plant genetic resource in the province of Neira, Boyaca department, Colombia. Given these concerns, the aim of this research was to characterize the genetic diversity with random amplified microsatellite markers (RAM). Twenty-one lulo materials were collected in the Soaquira and Sacaneca, Boyaca-Colombia districts to calculate genetic diversity and similarity indices. In addition, the analysis with the Nei-Li coefficient formed three groups at 0.60 similarity level showing a loose distribution of the materials without a relationship with the geographical site or the presence or absence of thorns. The seven RAM markers generated 346 alleles, ranging between 43 and 48 for CT and TG, respectively. The average estimated heterozygosity values ranged from 0.33 for TG and 0.40 for CGA. The average value for all evaluated lulo materials was 0.36, higher than the reported value in other studies on lulo genetic diversity in Colombia. The average Fst value for the 20 evaluated materials was 0.14, showing a moderate genetic differentiation. Overall, the RAM markers identified genetic variability in the study area, the need for levels of subdivision and hierarchization greater than those considered in this research, which would have allowed a better use of the plant genetic diversity present in the lulo materials in the province of Neira-Boyaca, Colombia.
publishDate 2017
dc.date.issued.spa.fl_str_mv 2017-07-01
dc.date.accessioned.spa.fl_str_mv 2019-07-02T19:53:01Z
dc.date.available.spa.fl_str_mv 2019-07-02T19:53:01Z
dc.type.spa.fl_str_mv Artículo de revista
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status_str publishedVersion
dc.identifier.issn.spa.fl_str_mv ISSN: 2323-0118
dc.identifier.uri.none.fl_str_mv https://repositorio.unal.edu.co/handle/unal/61084
dc.identifier.eprints.spa.fl_str_mv http://bdigital.unal.edu.co/59892/
identifier_str_mv ISSN: 2323-0118
url https://repositorio.unal.edu.co/handle/unal/61084
http://bdigital.unal.edu.co/59892/
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.spa.fl_str_mv https://revistas.unal.edu.co/index.php/acta_agronomica/article/view/58997
dc.relation.ispartof.spa.fl_str_mv Universidad Nacional de Colombia Revistas electrónicas UN Acta Agronómica
Acta Agronómica
dc.relation.references.spa.fl_str_mv Morillo Coronado, Ana Cruz and Rodriguez Fagua, Andrea Del Pilar and Morillo Coronado, Yacenia (2017) Characterization of lulo (Solanum quitoense Lam.) genetic diversity in the department of Boyaca, Colombia. Acta Agronómica, 66 (3). pp. 430-435. ISSN 2323-0118
dc.rights.spa.fl_str_mv Derechos reservados - Universidad Nacional de Colombia
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.license.spa.fl_str_mv Atribución-NoComercial 4.0 Internacional
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dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
rights_invalid_str_mv Atribución-NoComercial 4.0 Internacional
Derechos reservados - Universidad Nacional de Colombia
http://creativecommons.org/licenses/by-nc/4.0/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad Nacional de Colombia - Sede Palmira
institution Universidad Nacional de Colombia
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