Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens

One of the most challenging questions in plant breeding and molecular plant pathology research is what are the genetic and molecular bases of quantitative disease resistance (QDR)?. The scarce knowledge of how this type of resistance works has hindered plant breeders to fully take advantage of it. T...

Full description

Autores:
Vásquez, Andrea Ximena
Soto Sedano, Johana Carolina
López Carrascal, Camilo Ernesto
Tipo de recurso:
Article of journal
Fecha de publicación:
2018
Institución:
Universidad Nacional de Colombia
Repositorio:
Universidad Nacional de Colombia
Idioma:
spa
OAI Identifier:
oai:repositorio.unal.edu.co:unal/68167
Acceso en línea:
https://repositorio.unal.edu.co/handle/unal/68167
http://bdigital.unal.edu.co/69200/
Palabra clave:
57 Ciencias de la vida; Biología / Life sciences; biology
breeding
complex traits
genome
gene expression
plant immunity
quantitative disease resistance (QDR)
quantitative trait loci (QTL).
expresión génica
fitomejoramiento
genoma
inmunidad vegetal
loci de caracteres cuantitativos
rasgos complejos
resistencia cuantitativa a enfermedades.
Rights
openAccess
License
Atribución-NoComercial 4.0 Internacional
id UNACIONAL2_3e65515eccb7a77060e812172c97531b
oai_identifier_str oai:repositorio.unal.edu.co:unal/68167
network_acronym_str UNACIONAL2
network_name_str Universidad Nacional de Colombia
repository_id_str
dc.title.spa.fl_str_mv Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
title Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
spellingShingle Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
57 Ciencias de la vida; Biología / Life sciences; biology
breeding
complex traits
genome
gene expression
plant immunity
quantitative disease resistance (QDR)
quantitative trait loci (QTL).
expresión génica
fitomejoramiento
genoma
inmunidad vegetal
loci de caracteres cuantitativos
rasgos complejos
resistencia cuantitativa a enfermedades.
title_short Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
title_full Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
title_fullStr Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
title_full_unstemmed Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
title_sort Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens
dc.creator.fl_str_mv Vásquez, Andrea Ximena
Soto Sedano, Johana Carolina
López Carrascal, Camilo Ernesto
dc.contributor.author.spa.fl_str_mv Vásquez, Andrea Ximena
Soto Sedano, Johana Carolina
López Carrascal, Camilo Ernesto
dc.subject.ddc.spa.fl_str_mv 57 Ciencias de la vida; Biología / Life sciences; biology
topic 57 Ciencias de la vida; Biología / Life sciences; biology
breeding
complex traits
genome
gene expression
plant immunity
quantitative disease resistance (QDR)
quantitative trait loci (QTL).
expresión génica
fitomejoramiento
genoma
inmunidad vegetal
loci de caracteres cuantitativos
rasgos complejos
resistencia cuantitativa a enfermedades.
dc.subject.proposal.spa.fl_str_mv breeding
complex traits
genome
gene expression
plant immunity
quantitative disease resistance (QDR)
quantitative trait loci (QTL).
expresión génica
fitomejoramiento
genoma
inmunidad vegetal
loci de caracteres cuantitativos
rasgos complejos
resistencia cuantitativa a enfermedades.
description One of the most challenging questions in plant breeding and molecular plant pathology research is what are the genetic and molecular bases of quantitative disease resistance (QDR)?. The scarce knowledge of how this type of resistance works has hindered plant breeders to fully take advantage of it. To overcome these obstacles new methodologies for the study of quantitative traits have been developed. Approaches such as genetic mapping, identification of quantitative trait loci (QTL) and association mapping, including candidate gene approach and genome wide association studies, have been historically undertaken to dissect quantitative traits and therefore to study QDR. Additionally, great advances in quantitative phenotypic data collection have been provided to improve these analyses. Recently, genes associated to QDR have been cloned, leading to new hypothesis concerning the molecular bases of this type of resistance. In this review we present the more recent advances about QDR and corresponding application, which have allowed postulating new ideas that can help to construct new QDR models. Some of the hypotheses presented here as possible explanations for QDR are related to the expression level and alternative splicing of some defense-related genes expression, the action of “weak alleles” of R genes, the presence of allelic variants in genes involved in the defense response and a central role of kinases or pseudokinases. With the information recapitulated in this review it is possible to conclude that the conceptual distinction between qualitative and quantitative resistance may be questioned since both share important components.
publishDate 2018
dc.date.issued.spa.fl_str_mv 2018-01-01
dc.date.accessioned.spa.fl_str_mv 2019-07-03T06:02:22Z
dc.date.available.spa.fl_str_mv 2019-07-03T06:02:22Z
dc.type.spa.fl_str_mv Artículo de revista
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_6501
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.content.spa.fl_str_mv Text
dc.type.redcol.spa.fl_str_mv http://purl.org/redcol/resource_type/ART
format http://purl.org/coar/resource_type/c_6501
status_str publishedVersion
dc.identifier.issn.spa.fl_str_mv ISSN: 1900-1649
dc.identifier.uri.none.fl_str_mv https://repositorio.unal.edu.co/handle/unal/68167
dc.identifier.eprints.spa.fl_str_mv http://bdigital.unal.edu.co/69200/
identifier_str_mv ISSN: 1900-1649
url https://repositorio.unal.edu.co/handle/unal/68167
http://bdigital.unal.edu.co/69200/
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.spa.fl_str_mv https://revistas.unal.edu.co/index.php/actabiol/article/view/66487
dc.relation.ispartof.spa.fl_str_mv Universidad Nacional de Colombia Revistas electrónicas UN Acta Biológica Colombiana
Acta Biológica Colombiana
dc.relation.references.spa.fl_str_mv Vásquez, Andrea Ximena and Soto Sedano, Johana Carolina and López Carrascal, Camilo Ernesto (2018) Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens. Acta Biológica Colombiana, 23 (1). pp. 5-16. ISSN 1900-1649
dc.rights.spa.fl_str_mv Derechos reservados - Universidad Nacional de Colombia
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.license.spa.fl_str_mv Atribución-NoComercial 4.0 Internacional
dc.rights.uri.spa.fl_str_mv http://creativecommons.org/licenses/by-nc/4.0/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
rights_invalid_str_mv Atribución-NoComercial 4.0 Internacional
Derechos reservados - Universidad Nacional de Colombia
http://creativecommons.org/licenses/by-nc/4.0/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad Nacional de Colombia - Sede Bogotá - Faculdad de Ciencias - Departamento de Biología
institution Universidad Nacional de Colombia
bitstream.url.fl_str_mv https://repositorio.unal.edu.co/bitstream/unal/68167/1/66487-363766-6-PB.pdf
https://repositorio.unal.edu.co/bitstream/unal/68167/2/66487-363766-6-PB.pdf.jpg
bitstream.checksum.fl_str_mv c46d99f43e266641a0a4e5551f903157
fbb9ee179d8750f5f3cd959d2408aed4
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
repository.name.fl_str_mv Repositorio Institucional Universidad Nacional de Colombia
repository.mail.fl_str_mv repositorio_nal@unal.edu.co
_version_ 1806886481958010880
spelling Atribución-NoComercial 4.0 InternacionalDerechos reservados - Universidad Nacional de Colombiahttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Vásquez, Andrea Ximenac0e0a7b3-b930-4953-8962-4484e73ca23e300Soto Sedano, Johana Carolina5c1faa5a-66c2-460f-bf10-6571fcf88f7f300López Carrascal, Camilo Ernestoc1f555c1-29e2-49fb-9923-641e2519545c3002019-07-03T06:02:22Z2019-07-03T06:02:22Z2018-01-01ISSN: 1900-1649https://repositorio.unal.edu.co/handle/unal/68167http://bdigital.unal.edu.co/69200/One of the most challenging questions in plant breeding and molecular plant pathology research is what are the genetic and molecular bases of quantitative disease resistance (QDR)?. The scarce knowledge of how this type of resistance works has hindered plant breeders to fully take advantage of it. To overcome these obstacles new methodologies for the study of quantitative traits have been developed. Approaches such as genetic mapping, identification of quantitative trait loci (QTL) and association mapping, including candidate gene approach and genome wide association studies, have been historically undertaken to dissect quantitative traits and therefore to study QDR. Additionally, great advances in quantitative phenotypic data collection have been provided to improve these analyses. Recently, genes associated to QDR have been cloned, leading to new hypothesis concerning the molecular bases of this type of resistance. In this review we present the more recent advances about QDR and corresponding application, which have allowed postulating new ideas that can help to construct new QDR models. Some of the hypotheses presented here as possible explanations for QDR are related to the expression level and alternative splicing of some defense-related genes expression, the action of “weak alleles” of R genes, the presence of allelic variants in genes involved in the defense response and a central role of kinases or pseudokinases. With the information recapitulated in this review it is possible to conclude that the conceptual distinction between qualitative and quantitative resistance may be questioned since both share important components.Una de las preguntas más desafiantes del fitomejoramiento y de la fitopatología molecular es ¿cuáles son las bases genéticas y moleculares de la resistencia cuantitativa a enfermedades?. El escaso conocimiento de cómo este tipo de resistencia funciona ha obstaculizado que los fitomejoradores la aprovecharlo plenamente. Para superar estos obstáculos se han desarrollado nuevas metodologías para el estudio de rasgos cuantitativos. Los enfoques como el mapeo genético, la identificación de loci de rasgos cuantitativos (QTL) y el mapeo por asociaciones, incluyendo el enfoque de genes candidatos y los estudios de asociación amplia del genoma, se han llevado a cabo históricamente para describir rasgos cuantitativos y por lo tanto para estudiar QDR. Además, se han proporcionado grandes avances en la obtención de datos fenotípicos cuantitativos para mejorar estos análisis. Recientemente, algunos genes asociados a QDR han sido clonados, lo que conduce a nuevas hipótesis sobre las bases moleculares de este tipo de resistencia. En esta revisión presentamos los avances más recientes sobre QDR y la correspondiente aplicación, que han permitido postular nuevas ideas que pueden ayudar a construir nuevos modelos. Algunas de las hipótesis presentadas aquí como posibles explicaciones para QDR están relacionadas con el nivel de expresión y el splicing alternativo de algunos genes relacionados con la defensa, la acción de "alelos débiles" de genes R, la presencia de variantes alélicas en los genes implicados en la respuesta de defensa y un papel central de quinasas o pseudoqinasas. Con la información recapitulada en esta revisión es posible concluir que la distinción conceptual entre resistencia cualitativa y cuantitativa puede ser cuestionada ya que ambos comparten importantes componentes.application/pdfspaUniversidad Nacional de Colombia - Sede Bogotá - Faculdad de Ciencias - Departamento de Biologíahttps://revistas.unal.edu.co/index.php/actabiol/article/view/66487Universidad Nacional de Colombia Revistas electrónicas UN Acta Biológica ColombianaActa Biológica ColombianaVásquez, Andrea Ximena and Soto Sedano, Johana Carolina and López Carrascal, Camilo Ernesto (2018) Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogens. Acta Biológica Colombiana, 23 (1). pp. 5-16. ISSN 1900-164957 Ciencias de la vida; Biología / Life sciences; biologybreedingcomplex traitsgenomegene expressionplant immunityquantitative disease resistance (QDR)quantitative trait loci (QTL).expresión génicafitomejoramientogenomainmunidad vegetalloci de caracteres cuantitativosrasgos complejosresistencia cuantitativa a enfermedades.Unraveling the molecules hidden in the gray shadows of quantitative disease resistance to pathogensArtículo de revistainfo:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1http://purl.org/coar/version/c_970fb48d4fbd8a85Texthttp://purl.org/redcol/resource_type/ARTORIGINAL66487-363766-6-PB.pdfapplication/pdf240998https://repositorio.unal.edu.co/bitstream/unal/68167/1/66487-363766-6-PB.pdfc46d99f43e266641a0a4e5551f903157MD51THUMBNAIL66487-363766-6-PB.pdf.jpg66487-363766-6-PB.pdf.jpgGenerated Thumbnailimage/jpeg9849https://repositorio.unal.edu.co/bitstream/unal/68167/2/66487-363766-6-PB.pdf.jpgfbb9ee179d8750f5f3cd959d2408aed4MD52unal/68167oai:repositorio.unal.edu.co:unal/681672024-05-25 23:09:20.746Repositorio Institucional Universidad Nacional de Colombiarepositorio_nal@unal.edu.co