Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo

ilustraciones, graficas

Autores:
Rubio Fernández, Diego
Tipo de recurso:
Doctoral thesis
Fecha de publicación:
2021
Institución:
Universidad Nacional de Colombia
Repositorio:
Universidad Nacional de Colombia
Idioma:
spa
OAI Identifier:
oai:repositorio.unal.edu.co:unal/81149
Acceso en línea:
https://repositorio.unal.edu.co/handle/unal/81149
https://repositorio.unal.edu.co/
Palabra clave:
630 - Agricultura y tecnologías relacionadas
Suelos agrícolas
productividad agrícola
agricultural soils
agricultural productivity
Agricultural Soil
Agricultural Productivity
Soil Microbiota
Carbon and Nitrogen Metabolism
Microbiota Functional DIversity
Agent Based Modeling
Carbon metabolism
Nitrogen metabolism
Microbiome
Functional diversity
Suelos Agricolas
Microbiota edáfica
Metabolismo del carbono y del nitrógeno
Modelamiento Basado en Agentes
Netlogo
Productividad agrícola del suelo
Diversidad Funcional
Rights
openAccess
License
Reconocimiento 4.0 Internacional
id UNACIONAL2_3c2ffbf9b37054734b8d29eb02a32eff
oai_identifier_str oai:repositorio.unal.edu.co:unal/81149
network_acronym_str UNACIONAL2
network_name_str Universidad Nacional de Colombia
repository_id_str
dc.title.spa.fl_str_mv Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
dc.title.translated.eng.fl_str_mv Modeling agricultural productivity: correlation with rhizospheric microbial diversity, metabolic processes and physicochemical soil properties
title Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
spellingShingle Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
630 - Agricultura y tecnologías relacionadas
Suelos agrícolas
productividad agrícola
agricultural soils
agricultural productivity
Agricultural Soil
Agricultural Productivity
Soil Microbiota
Carbon and Nitrogen Metabolism
Microbiota Functional DIversity
Agent Based Modeling
Carbon metabolism
Nitrogen metabolism
Microbiome
Functional diversity
Suelos Agricolas
Microbiota edáfica
Metabolismo del carbono y del nitrógeno
Modelamiento Basado en Agentes
Netlogo
Productividad agrícola del suelo
Diversidad Funcional
title_short Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
title_full Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
title_fullStr Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
title_full_unstemmed Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
title_sort Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del suelo
dc.creator.fl_str_mv Rubio Fernández, Diego
dc.contributor.advisor.none.fl_str_mv Barreto Hernández, Emiliano
dc.contributor.author.none.fl_str_mv Rubio Fernández, Diego
dc.contributor.researchgroup.spa.fl_str_mv Bioinformática
dc.subject.ddc.spa.fl_str_mv 630 - Agricultura y tecnologías relacionadas
topic 630 - Agricultura y tecnologías relacionadas
Suelos agrícolas
productividad agrícola
agricultural soils
agricultural productivity
Agricultural Soil
Agricultural Productivity
Soil Microbiota
Carbon and Nitrogen Metabolism
Microbiota Functional DIversity
Agent Based Modeling
Carbon metabolism
Nitrogen metabolism
Microbiome
Functional diversity
Suelos Agricolas
Microbiota edáfica
Metabolismo del carbono y del nitrógeno
Modelamiento Basado en Agentes
Netlogo
Productividad agrícola del suelo
Diversidad Funcional
dc.subject.agrovocuri.spa.fl_str_mv Suelos agrícolas
productividad agrícola
dc.subject.agrovocuri.eng.fl_str_mv agricultural soils
agricultural productivity
dc.subject.proposal.eng.fl_str_mv Agricultural Soil
Agricultural Productivity
Soil Microbiota
Carbon and Nitrogen Metabolism
Microbiota Functional DIversity
Agent Based Modeling
Carbon metabolism
Nitrogen metabolism
Microbiome
Functional diversity
dc.subject.proposal.spa.fl_str_mv Suelos Agricolas
Microbiota edáfica
Metabolismo del carbono y del nitrógeno
Modelamiento Basado en Agentes
Netlogo
Productividad agrícola del suelo
dc.subject.proposal.fra.fl_str_mv Diversidad Funcional
description ilustraciones, graficas
publishDate 2021
dc.date.issued.none.fl_str_mv 2021
dc.date.accessioned.none.fl_str_mv 2022-03-08T15:07:33Z
dc.date.available.none.fl_str_mv 2022-03-08T15:07:33Z
dc.type.spa.fl_str_mv Trabajo de grado - Doctorado
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/doctoralThesis
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/acceptedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_db06
dc.type.content.spa.fl_str_mv Text
dc.type.redcol.spa.fl_str_mv http://purl.org/redcol/resource_type/TD
format http://purl.org/coar/resource_type/c_db06
status_str acceptedVersion
dc.identifier.uri.none.fl_str_mv https://repositorio.unal.edu.co/handle/unal/81149
dc.identifier.instname.spa.fl_str_mv Universidad Nacional de Colombia
dc.identifier.reponame.spa.fl_str_mv Repositorio Institucional Universidad Nacional de Colombia
dc.identifier.repourl.spa.fl_str_mv https://repositorio.unal.edu.co/
url https://repositorio.unal.edu.co/handle/unal/81149
https://repositorio.unal.edu.co/
identifier_str_mv Universidad Nacional de Colombia
Repositorio Institucional Universidad Nacional de Colombia
dc.language.iso.spa.fl_str_mv spa
language spa
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dc.publisher.spa.fl_str_mv Universidad Nacional de Colombia
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dc.publisher.branch.spa.fl_str_mv Universidad Nacional de Colombia - Sede Bogotá
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spelling Reconocimiento 4.0 Internacionalhttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Barreto Hernández, Emilianob7a2cae2c08b5d6a549e173576c6c82dRubio Fernández, Diego33d16f7df6919a1e4de79dcdcc8396d5Bioinformática2022-03-08T15:07:33Z2022-03-08T15:07:33Z2021https://repositorio.unal.edu.co/handle/unal/81149Universidad Nacional de ColombiaRepositorio Institucional Universidad Nacional de Colombiahttps://repositorio.unal.edu.co/ilustraciones, graficasEl modelamiento de suelos agrícolas ha evolucionado de acuerdo con las cuestiones asociadas a problemas específicos como su productividad, en términos de la biodisponibilidad de nutrientes así como de las variables climáticas y de los parámetros de manejo; sin embargo, la microbiota edáfica ha sido establecida en la mayoría de los casos, como una fracción de la materia orgánica y la redundancia funcional se definió como característica predominante en suelos, cuya representación se hace a través de ecuaciones matemáticas que definen la cinética del crecimiento microbiano evitando los aspectos relacionados con la estructura de las comunidades . Nuevas propuestas de modelos de suelos agrícolas, en los que la microbiota es un elemento fundamental, pueden contribuir al entendimiento de los procesos microbiológicos asociados al metabolismo de sustratos y como estos procesos influyen por otra parte en el crecimiento de las plantas. En este trabajo se propone el modelamiento de suelos agrícolas, considerando de manera explícita la diversidad microbiana en términos funcionales y su asociación a procesos concretos como el metabolismo de la celulosa y del nitrógeno orgánico. Se ha considerado como objetivo del trabajo, diseñar e implementar un modelo de la productividad agrícola del suelo basado en la correlación de la diversidad funcional y taxonómica de las comunidades microbianas a nivel rizosférico, sus procesos metabólicos relacionados con el carbono y nitrógeno, y las características fisicoquímicas del suelo. Se han obtenido como resultados, de acuerdo con el objetivo propuesto, la construcción de un sistema con diferentes componentes en los que el suelo se explica desde la diversidad funcional de la microbiota y el procesamiento de dos elementos estructurales (carbono y el nitrógeno), y cuya representación está basada en conceptos de Dinámica de Sistemas. Por otra parte, la implementación del sistema, es decir, el modelo de simulación se construye con base en el concepto de Modelamiento Basado en Agentes en la plataforma de modelamiento Netlogo. La simulación ha permitido definir la dinámica de la microbiota bajo diferentes condiciones en función de su relación con el crecimiento de la planta. (Texto tomado de la fuente)Agricultural soil modeling has evolved based on questions associated with productivity, nutrients bioavailability, climate and management variables; nonetheless, soil microbiome has been considered and established as a fraction of organic matter pools and the functional redundancy defined, in most models, as a prevailing factor in agricultural soils, represented by mathematical equations describing microbial growth kinetics and avoiding details of the microbiome dynamics and structure. Recently, new agricultural soil model approaches based on the microbiome dynamics have been proposed. They can contribute to understand microbiological soil processes directly linked to substrate metabolism and the influence of these processes on plant growth. This work presents an approach to the modelling of agricultural rhizospheric soils that considers explicitly microbial diversity in terms of functions associated to specific processes like cellulose and organic nitrogen metabolism. The work goal was to design and implement a model of soil agricultural productivity based on the correlation between functional and taxonomic diversity of microbial communities at the rhizosphere level, their metabolic processes linked to carbon and nitrogen, and some physicochemical soil aspects. As result, it has been possible to simulate an agricultural soil based on the concept of system dynamics and agent-based modeling. Soil is explained from the microbiome functional diversity and the processing of the structural elements carbon and nitrogen, through a representation based on systems dynamics. On the other hand, the simulation of the system was based on agent-based modelling developed on the Netlogo Platform. The simulations allowed to represent the dynamics of the microbiome in terms of microorganisms and enzymes associated with agricultural parameters of soil managementDoctoradoDoctor en BiotecnologíaModelamiento de Sistemas Biológicosxix, 222 páginasapplication/pdfspaUniversidad Nacional de ColombiaBogotá - Ciencias - Doctorado en BiotecnologíaInstituto de Biotecnología (IBUN)Facultad de CienciasBogotá, ColombiaUniversidad Nacional de Colombia - Sede Bogotá630 - Agricultura y tecnologías relacionadasSuelos agrícolasproductividad agrícolaagricultural soilsagricultural productivityAgricultural SoilAgricultural ProductivitySoil MicrobiotaCarbon and Nitrogen MetabolismMicrobiota Functional DIversityAgent Based ModelingCarbon metabolismNitrogen metabolismMicrobiomeFunctional diversitySuelos AgricolasMicrobiota edáficaMetabolismo del carbono y del nitrógenoModelamiento Basado en AgentesNetlogoProductividad agrícola del sueloDiversidad FuncionalModelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del sueloModeling agricultural productivity: correlation with rhizospheric microbial diversity, metabolic processes and physicochemical soil propertiesTrabajo de grado - Doctoradoinfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/acceptedVersionhttp://purl.org/coar/resource_type/c_db06Texthttp://purl.org/redcol/resource_type/TDAckoff, R. 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Wageningen: Wageningen Academic Publishers.Modelamiento de la productividad agrícola: correlación con la diversidad microbiana rizosférica, sus procesos metabólicos y las propiedades fisicoquímicas del sueloInstituto de Biotecnología - Universidad Nacional de ColombiaInvestigadoresORIGINAL79688976.2021.pdf79688976.2021.pdfTesis de Doctorado en Biotecnologíaapplication/pdf8940311https://repositorio.unal.edu.co/bitstream/unal/81149/1/79688976.2021.pdf863ed5a6c99c8db3410e5a85dc0d9710MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-84074https://repositorio.unal.edu.co/bitstream/unal/81149/2/license.txt8153f7789df02f0a4c9e079953658ab2MD52THUMBNAIL79688976.2021.pdf.jpg79688976.2021.pdf.jpgGenerated Thumbnailimage/jpeg5439https://repositorio.unal.edu.co/bitstream/unal/81149/3/79688976.2021.pdf.jpg1ac054cbb3abadb19efac26d8c88f636MD53unal/81149oai:repositorio.unal.edu.co:unal/811492024-08-04 23:09:51.365Repositorio Institucional Universidad Nacional de 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EVESURBIFBPUiBMQSBTRUNSRVRBUsONQSBHRU5FUkFMLiAqTEEgVEVTSVMgQSBQVUJMSUNBUiBERUJFIFNFUiBMQSBWRVJTScOTTiBGSU5BTCBBUFJPQkFEQS4gCgpBbCBoYWNlciBjbGljIGVuIGVsIHNpZ3VpZW50ZSBib3TDs24sIHVzdGVkIGluZGljYSBxdWUgZXN0w6EgZGUgYWN1ZXJkbyBjb24gZXN0b3MgdMOpcm1pbm9zLiBTaSB0aWVuZSBhbGd1bmEgZHVkYSBzb2JyZSBsYSBsaWNlbmNpYSwgcG9yIGZhdm9yLCBjb250YWN0ZSBjb24gZWwgYWRtaW5pc3RyYWRvciBkZWwgc2lzdGVtYS4KClVOSVZFUlNJREFEIE5BQ0lPTkFMIERFIENPTE9NQklBIC0gw5psdGltYSBtb2RpZmljYWNpw7NuIDE5LzEwLzIwMjEK

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