Classification of squamous cell cervical cytology

Cervical cancer occurs significantly in women in developing countries every day and produces a high number of casualties, with a large economic and social cost. The World Health Organization, in the right against cervical cancer, promotes early detection screening programs by difeerent detection tec...

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Autores:
Camargo Casallas, Luz Helena
Tipo de recurso:
Fecha de publicación:
2012
Institución:
Universidad Nacional de Colombia
Repositorio:
Universidad Nacional de Colombia
Idioma:
spa
OAI Identifier:
oai:repositorio.unal.edu.co:unal/10525
Acceso en línea:
https://repositorio.unal.edu.co/handle/unal/10525
http://bdigital.unal.edu.co/7698/
Palabra clave:
61 Ciencias médicas; Medicina / Medicine and health
62 Ingeniería y operaciones afines / Engineering
Cervical Cancer
Papanicolaou
MPEG-7
Color Layout Descriptor
Scala-ble Color Descriptor
Edge Histogram Descriptor
Rights
openAccess
License
Atribución-NoComercial 4.0 Internacional
id UNACIONAL2_214266325d1b778c803b0f81a6c87e9d
oai_identifier_str oai:repositorio.unal.edu.co:unal/10525
network_acronym_str UNACIONAL2
network_name_str Universidad Nacional de Colombia
repository_id_str
dc.title.spa.fl_str_mv Classification of squamous cell cervical cytology
title Classification of squamous cell cervical cytology
spellingShingle Classification of squamous cell cervical cytology
61 Ciencias médicas; Medicina / Medicine and health
62 Ingeniería y operaciones afines / Engineering
Cervical Cancer
Papanicolaou
MPEG-7
Color Layout Descriptor
Scala-ble Color Descriptor
Edge Histogram Descriptor
title_short Classification of squamous cell cervical cytology
title_full Classification of squamous cell cervical cytology
title_fullStr Classification of squamous cell cervical cytology
title_full_unstemmed Classification of squamous cell cervical cytology
title_sort Classification of squamous cell cervical cytology
dc.creator.fl_str_mv Camargo Casallas, Luz Helena
dc.contributor.author.spa.fl_str_mv Camargo Casallas, Luz Helena
dc.contributor.spa.fl_str_mv Romero Castro, Eduardo
dc.subject.ddc.spa.fl_str_mv 61 Ciencias médicas; Medicina / Medicine and health
62 Ingeniería y operaciones afines / Engineering
topic 61 Ciencias médicas; Medicina / Medicine and health
62 Ingeniería y operaciones afines / Engineering
Cervical Cancer
Papanicolaou
MPEG-7
Color Layout Descriptor
Scala-ble Color Descriptor
Edge Histogram Descriptor
dc.subject.proposal.spa.fl_str_mv Cervical Cancer
Papanicolaou
MPEG-7
Color Layout Descriptor
Scala-ble Color Descriptor
Edge Histogram Descriptor
description Cervical cancer occurs significantly in women in developing countries every day and produces a high number of casualties, with a large economic and social cost. The World Health Organization, in the right against cervical cancer, promotes early detection screening programs by difeerent detection techniques such as conventional cytology (Pap), cytology liquid medium (CML), DNA test Human Papillomavirus (HPV), staining with dilute acetic acid and Lugol's iodine solution. Conventional cytology is the most used technique, being widely accepted, inexpensive, and with quality control mechanisms. The test has shown a sensitivity of 38% to 84% and a specificity of 90% in multiple studies and has been considered as the choice test for screening [14]. The cervical cancer is not a public health problems in developed countries since more than three decades, among others because of implementation of other tests such as the CML which has increased the sensitivity to a figures that vary between 76% and 99 %. This test in particular produces a thin monolayer of cells that are examined. In our countries this technique is really far from being applied because of its high cost. In consequence, the conventional cytology has remained in practice as the only possible examination of the cervix pathology. In this technique, a sample of cells from the transformation zone of the cervix is taken, using a brush or wooden spatula, spread onto a slide and fixed with a preservative solution. This sample is then sent to a laboratory for staining and microscopic examination to determine whether cells are normal or not. This task requires time and expertise for the diagnosis. Attempting to alleviate the work burden from the number of examinations in clinical routine scenario, some researchers have proposed the development of computational tools to detect and classify the cells of the transformation cervix zone. In the present work the transformation zone is firstly characterized using color and texture descriptors defined in the MPEG-7 standard, and the tissue descriptors are used as the input to a bank of binary classifiers, obtaining a precision of 90% and a sensitivity of 83 %. Unlike traditional approaches that extract cell features from previously segmented cells, the present strategy is completely independent of the particular shape. Yet most works in the domain report higher precision rates, the images used in these works for training and evaluation are really different from what is obtained in the cytology laboratories in Colombia. Overall, most of these methods are applied to monolayer techniques and therefore the recognition rates are better from what we found in the present investigation. However, the main aim of the present work was thus to develop a strategy applicable to our real conditions as a pre-screening method, case in which the method should be robust to many random factors that contaminate the image capture. A segmentation strategy is very easily misleaded by all these factor so that our method should use characteristics independently of the segmentation quality, while the reading time is minimized, as well as the intra-observer variability, facilitating thereby real application of such screening tools.
publishDate 2012
dc.date.issued.spa.fl_str_mv 2012
dc.date.accessioned.spa.fl_str_mv 2019-06-24T23:38:50Z
dc.date.available.spa.fl_str_mv 2019-06-24T23:38:50Z
dc.type.spa.fl_str_mv Trabajo de grado - Maestría
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/masterThesis
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/acceptedVersion
dc.type.content.spa.fl_str_mv Text
dc.type.redcol.spa.fl_str_mv http://purl.org/redcol/resource_type/TM
status_str acceptedVersion
dc.identifier.uri.none.fl_str_mv https://repositorio.unal.edu.co/handle/unal/10525
dc.identifier.eprints.spa.fl_str_mv http://bdigital.unal.edu.co/7698/
url https://repositorio.unal.edu.co/handle/unal/10525
http://bdigital.unal.edu.co/7698/
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.ispartof.spa.fl_str_mv Universidad Nacional de Colombia Sede Bogotá Facultad de Medicina Departamento de Imágenes Diagnósticas
Departamento de Imágenes Diagnósticas
dc.relation.references.spa.fl_str_mv Camargo Casallas, Luz Helena (2012) Classification of squamous cell cervical cytology. Maestría thesis, Universidad Nacional de Colombia.
dc.rights.spa.fl_str_mv Derechos reservados - Universidad Nacional de Colombia
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.license.spa.fl_str_mv Atribución-NoComercial 4.0 Internacional
dc.rights.uri.spa.fl_str_mv http://creativecommons.org/licenses/by-nc/4.0/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
rights_invalid_str_mv Atribución-NoComercial 4.0 Internacional
Derechos reservados - Universidad Nacional de Colombia
http://creativecommons.org/licenses/by-nc/4.0/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.mimetype.spa.fl_str_mv application/pdf
institution Universidad Nacional de Colombia
bitstream.url.fl_str_mv https://repositorio.unal.edu.co/bitstream/unal/10525/1/597882.2012.pdf
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repository.name.fl_str_mv Repositorio Institucional Universidad Nacional de Colombia
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spelling Atribución-NoComercial 4.0 InternacionalDerechos reservados - Universidad Nacional de Colombiahttp://creativecommons.org/licenses/by-nc/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Romero Castro, EduardoCamargo Casallas, Luz Helena5354686a-bcb0-47ac-ab7b-547a31b09ff13002019-06-24T23:38:50Z2019-06-24T23:38:50Z2012https://repositorio.unal.edu.co/handle/unal/10525http://bdigital.unal.edu.co/7698/Cervical cancer occurs significantly in women in developing countries every day and produces a high number of casualties, with a large economic and social cost. The World Health Organization, in the right against cervical cancer, promotes early detection screening programs by difeerent detection techniques such as conventional cytology (Pap), cytology liquid medium (CML), DNA test Human Papillomavirus (HPV), staining with dilute acetic acid and Lugol's iodine solution. Conventional cytology is the most used technique, being widely accepted, inexpensive, and with quality control mechanisms. The test has shown a sensitivity of 38% to 84% and a specificity of 90% in multiple studies and has been considered as the choice test for screening [14]. The cervical cancer is not a public health problems in developed countries since more than three decades, among others because of implementation of other tests such as the CML which has increased the sensitivity to a figures that vary between 76% and 99 %. This test in particular produces a thin monolayer of cells that are examined. In our countries this technique is really far from being applied because of its high cost. In consequence, the conventional cytology has remained in practice as the only possible examination of the cervix pathology. In this technique, a sample of cells from the transformation zone of the cervix is taken, using a brush or wooden spatula, spread onto a slide and fixed with a preservative solution. This sample is then sent to a laboratory for staining and microscopic examination to determine whether cells are normal or not. This task requires time and expertise for the diagnosis. Attempting to alleviate the work burden from the number of examinations in clinical routine scenario, some researchers have proposed the development of computational tools to detect and classify the cells of the transformation cervix zone. In the present work the transformation zone is firstly characterized using color and texture descriptors defined in the MPEG-7 standard, and the tissue descriptors are used as the input to a bank of binary classifiers, obtaining a precision of 90% and a sensitivity of 83 %. Unlike traditional approaches that extract cell features from previously segmented cells, the present strategy is completely independent of the particular shape. Yet most works in the domain report higher precision rates, the images used in these works for training and evaluation are really different from what is obtained in the cytology laboratories in Colombia. Overall, most of these methods are applied to monolayer techniques and therefore the recognition rates are better from what we found in the present investigation. However, the main aim of the present work was thus to develop a strategy applicable to our real conditions as a pre-screening method, case in which the method should be robust to many random factors that contaminate the image capture. A segmentation strategy is very easily misleaded by all these factor so that our method should use characteristics independently of the segmentation quality, while the reading time is minimized, as well as the intra-observer variability, facilitating thereby real application of such screening tools.Maestríaapplication/pdfspaUniversidad Nacional de Colombia Sede Bogotá Facultad de Medicina Departamento de Imágenes DiagnósticasDepartamento de Imágenes DiagnósticasCamargo Casallas, Luz Helena (2012) Classification of squamous cell cervical cytology. Maestría thesis, Universidad Nacional de Colombia.61 Ciencias médicas; Medicina / Medicine and health62 Ingeniería y operaciones afines / EngineeringCervical CancerPapanicolaouMPEG-7Color Layout DescriptorScala-ble Color DescriptorEdge Histogram DescriptorClassification of squamous cell cervical cytologyTrabajo de grado - Maestríainfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/acceptedVersionTexthttp://purl.org/redcol/resource_type/TMORIGINAL597882.2012.pdfapplication/pdf3245143https://repositorio.unal.edu.co/bitstream/unal/10525/1/597882.2012.pdf59f7d8c1c166ec4355fb086d553dbd86MD51THUMBNAIL597882.2012.pdf.jpg597882.2012.pdf.jpgGenerated Thumbnailimage/jpeg4093https://repositorio.unal.edu.co/bitstream/unal/10525/2/597882.2012.pdf.jpg0a33362e1dd72ce3466b56e05537f47fMD52unal/10525oai:repositorio.unal.edu.co:unal/105252023-09-12 23:04:31.776Repositorio Institucional Universidad Nacional de Colombiarepositorio_nal@unal.edu.co