Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia
ABSTRACT: The present study aimed to determine Mycobacterium avium subsp. paratuberculosis (MAP) prevalence according to environmental samples and to explore the herd-level risk factors associated to MAP infection in dairy herds under mechanical milking parlor and pasture grazing-based systems. The...
- Autores:
-
Correa Valencia, Nathalia María del Pilar
Ramírez Vásquez, Nicolás Fernando
Fernández Silva, Jorge Arturo
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2022
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/31943
- Acceso en línea:
- https://hdl.handle.net/10495/31943
- Palabra clave:
- Ganado Holstein - Friesian
Holstein - Friesian Cattle
Mycobacterium avium subsp. paratuberculosis
Paratuberculosis
Ganado Jersey
http://aims.fao.org/aos/agrovoc/c_37851
http://aims.fao.org/aos/agrovoc/c_16452
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-sa/2.5/co/
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oai:bibliotecadigital.udea.edu.co:10495/31943 |
network_acronym_str |
UDEA2 |
network_name_str |
Repositorio UdeA |
repository_id_str |
|
dc.title.spa.fl_str_mv |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
title |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
spellingShingle |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia Ganado Holstein - Friesian Holstein - Friesian Cattle Mycobacterium avium subsp. paratuberculosis Paratuberculosis Ganado Jersey http://aims.fao.org/aos/agrovoc/c_37851 http://aims.fao.org/aos/agrovoc/c_16452 |
title_short |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
title_full |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
title_fullStr |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
title_full_unstemmed |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
title_sort |
Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, Colombia |
dc.creator.fl_str_mv |
Correa Valencia, Nathalia María del Pilar Ramírez Vásquez, Nicolás Fernando Fernández Silva, Jorge Arturo |
dc.contributor.author.none.fl_str_mv |
Correa Valencia, Nathalia María del Pilar Ramírez Vásquez, Nicolás Fernando Fernández Silva, Jorge Arturo |
dc.subject.lemb.none.fl_str_mv |
Ganado Holstein - Friesian Holstein - Friesian Cattle |
topic |
Ganado Holstein - Friesian Holstein - Friesian Cattle Mycobacterium avium subsp. paratuberculosis Paratuberculosis Ganado Jersey http://aims.fao.org/aos/agrovoc/c_37851 http://aims.fao.org/aos/agrovoc/c_16452 |
dc.subject.agrovoc.none.fl_str_mv |
Mycobacterium avium subsp. paratuberculosis Paratuberculosis |
dc.subject.proposal.spa.fl_str_mv |
Ganado Jersey |
dc.subject.agrovocuri.none.fl_str_mv |
http://aims.fao.org/aos/agrovoc/c_37851 http://aims.fao.org/aos/agrovoc/c_16452 |
description |
ABSTRACT: The present study aimed to determine Mycobacterium avium subsp. paratuberculosis (MAP) prevalence according to environmental samples and to explore the herd-level risk factors associated to MAP infection in dairy herds under mechanical milking parlor and pasture grazing-based systems. The study herds (n= 94) were located in 60 districts from five municipalities in the Northern region of the province of Antioquia, Colombia. Herds were visited once in 2016 to collect two composite environmental samples and to complete a risk assessment questionnaire. MAP identification was carried out using a quantitative real-time PCR method based on the IS900 sequence. A herd was considered as MAP-positive if one or both of the environmental samples were found positive by the molecular technique. The information on risk factors was analyzed using a multivariable logistic regression model. The apparent herd-level prevalence found was 14.9 % (14/94; 95 % CI: 7.7-22.1), ranging from 0 to 33.3 % at municipality-level. Herds where other than Pure-Holstein breeds were predominant (i.e. Jersey, Jersey crossbreeds) were more likely to be MAP-qPCR positively infected than those on which where pure-Holstein cattle was predominant (OR=3.7; 95 % CI: 1.1-15.2). The present study reports MAP prevalence in dairy herds in the province of Antioquia (Colombia), and the association between MAP environmental positivity with the predominant breed in the herd. |
publishDate |
2022 |
dc.date.accessioned.none.fl_str_mv |
2022-11-10T17:19:06Z |
dc.date.available.none.fl_str_mv |
2022-11-10T17:19:06Z |
dc.date.issued.none.fl_str_mv |
2022 |
dc.type.spa.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.hasversion.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
dc.type.local.spa.fl_str_mv |
Artículo de investigación |
format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
status_str |
publishedVersion |
dc.identifier.issn.none.fl_str_mv |
2007-1124 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/10495/31943 |
dc.identifier.doi.none.fl_str_mv |
10.22319/rmcp.v13i3.5776 |
dc.identifier.eissn.none.fl_str_mv |
2448-6698 |
identifier_str_mv |
2007-1124 10.22319/rmcp.v13i3.5776 2448-6698 |
url |
https://hdl.handle.net/10495/31943 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Rev. Mex. de Cienc. Pecuarias |
dc.rights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-sa/2.5/co/ |
dc.rights.accessrights.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.creativecommons.spa.fl_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-sa/2.5/co/ http://purl.org/coar/access_right/c_abf2 https://creativecommons.org/licenses/by-nc-sa/4.0/ |
dc.format.extent.spa.fl_str_mv |
15 |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias |
dc.publisher.group.spa.fl_str_mv |
CENTAURO |
dc.publisher.place.spa.fl_str_mv |
Ciudad de México, México |
institution |
Universidad de Antioquia |
bitstream.url.fl_str_mv |
https://bibliotecadigital.udea.edu.co/bitstream/10495/31943/1/CorreaNathalia_2022_PrevalenceMycobacterium-avium-subsp.Paratuberculosis.pdf https://bibliotecadigital.udea.edu.co/bitstream/10495/31943/2/license_rdf https://bibliotecadigital.udea.edu.co/bitstream/10495/31943/3/license.txt |
bitstream.checksum.fl_str_mv |
746c9517d26f68150e3b979259fbb397 e2060682c9c70d4d30c83c51448f4eed 8a4605be74aa9ea9d79846c1fba20a33 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio Institucional Universidad de Antioquia |
repository.mail.fl_str_mv |
andres.perez@udea.edu.co |
_version_ |
1812173170686296064 |
spelling |
Correa Valencia, Nathalia María del PilarRamírez Vásquez, Nicolás FernandoFernández Silva, Jorge Arturo2022-11-10T17:19:06Z2022-11-10T17:19:06Z20222007-1124https://hdl.handle.net/10495/3194310.22319/rmcp.v13i3.57762448-6698ABSTRACT: The present study aimed to determine Mycobacterium avium subsp. paratuberculosis (MAP) prevalence according to environmental samples and to explore the herd-level risk factors associated to MAP infection in dairy herds under mechanical milking parlor and pasture grazing-based systems. The study herds (n= 94) were located in 60 districts from five municipalities in the Northern region of the province of Antioquia, Colombia. Herds were visited once in 2016 to collect two composite environmental samples and to complete a risk assessment questionnaire. MAP identification was carried out using a quantitative real-time PCR method based on the IS900 sequence. A herd was considered as MAP-positive if one or both of the environmental samples were found positive by the molecular technique. The information on risk factors was analyzed using a multivariable logistic regression model. The apparent herd-level prevalence found was 14.9 % (14/94; 95 % CI: 7.7-22.1), ranging from 0 to 33.3 % at municipality-level. Herds where other than Pure-Holstein breeds were predominant (i.e. Jersey, Jersey crossbreeds) were more likely to be MAP-qPCR positively infected than those on which where pure-Holstein cattle was predominant (OR=3.7; 95 % CI: 1.1-15.2). The present study reports MAP prevalence in dairy herds in the province of Antioquia (Colombia), and the association between MAP environmental positivity with the predominant breed in the herd.COL000126215application/pdfengInstituto Nacional de Investigaciones Forestales, Agrícolas y PecuariasCENTAUROCiudad de México, Méxicoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-sa/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-sa/4.0/Prevalence of Mycobacterium avium subsp. paratuberculosis and associated risk factors in dairies under mechanical milking parlor- systems in Antioquia, ColombiaGanado Holstein - FriesianHolstein - Friesian CattleMycobacterium avium subsp. paratuberculosisParatuberculosisGanado Jerseyhttp://aims.fao.org/aos/agrovoc/c_37851http://aims.fao.org/aos/agrovoc/c_16452Rev. Mex. de Cienc. PecuariasRevista Mexicana de Ciencias Pecuarias643657133ORIGINALCorreaNathalia_2022_PrevalenceMycobacterium-avium-subsp.Paratuberculosis.pdfCorreaNathalia_2022_PrevalenceMycobacterium-avium-subsp.Paratuberculosis.pdfArtículo de investigaciónapplication/pdf502690https://bibliotecadigital.udea.edu.co/bitstream/10495/31943/1/CorreaNathalia_2022_PrevalenceMycobacterium-avium-subsp.Paratuberculosis.pdf746c9517d26f68150e3b979259fbb397MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-81051https://bibliotecadigital.udea.edu.co/bitstream/10495/31943/2/license_rdfe2060682c9c70d4d30c83c51448f4eedMD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/31943/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/31943oai:bibliotecadigital.udea.edu.co:10495/319432022-11-10 12:19:07.483Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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 |