Climate-based risk models for Fasciola hepatica in Colombia

ABSTRACT : A predictive Fasciola hepatica model, based on the growing degree day-water budget (GDD-WB) concept and the known biological requirements of the parasite, was developed within a geographical information system (GIS) in Colombia. Climate-based forecast index (CFI) values were calculated an...

Full description

Autores:
Valencia López, Natalia Eugenia
Malone, John B.
Gómez Carmona, Catalina
Velásquez Trujillo, Luz Elena
Tipo de recurso:
Article of investigation
Fecha de publicación:
2012
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/24104
Acceso en línea:
http://hdl.handle.net/10495/24104
Palabra clave:
Fasciola hepatica
Geographic Information Systems
Sistemas de Información Geográfica
Colombia
Vectores de Enfermedades
Disease Vectors
Modelos Teóricos
Models, Theoretical
Clima
Climate
Pronóstico del tiempo
Weather forecasting
http://aims.fao.org/aos/agrovoc/c_8340
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc/2.5/co/
id UDEA2_d3ceed4abcb53ecc29792294c479fd40
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/24104
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Climate-based risk models for Fasciola hepatica in Colombia
title Climate-based risk models for Fasciola hepatica in Colombia
spellingShingle Climate-based risk models for Fasciola hepatica in Colombia
Fasciola hepatica
Geographic Information Systems
Sistemas de Información Geográfica
Colombia
Vectores de Enfermedades
Disease Vectors
Modelos Teóricos
Models, Theoretical
Clima
Climate
Pronóstico del tiempo
Weather forecasting
http://aims.fao.org/aos/agrovoc/c_8340
title_short Climate-based risk models for Fasciola hepatica in Colombia
title_full Climate-based risk models for Fasciola hepatica in Colombia
title_fullStr Climate-based risk models for Fasciola hepatica in Colombia
title_full_unstemmed Climate-based risk models for Fasciola hepatica in Colombia
title_sort Climate-based risk models for Fasciola hepatica in Colombia
dc.creator.fl_str_mv Valencia López, Natalia Eugenia
Malone, John B.
Gómez Carmona, Catalina
Velásquez Trujillo, Luz Elena
dc.contributor.author.none.fl_str_mv Valencia López, Natalia Eugenia
Malone, John B.
Gómez Carmona, Catalina
Velásquez Trujillo, Luz Elena
dc.subject.decs.none.fl_str_mv Fasciola hepatica
Geographic Information Systems
Sistemas de Información Geográfica
Colombia
Vectores de Enfermedades
Disease Vectors
Modelos Teóricos
Models, Theoretical
Clima
Climate
topic Fasciola hepatica
Geographic Information Systems
Sistemas de Información Geográfica
Colombia
Vectores de Enfermedades
Disease Vectors
Modelos Teóricos
Models, Theoretical
Clima
Climate
Pronóstico del tiempo
Weather forecasting
http://aims.fao.org/aos/agrovoc/c_8340
dc.subject.agrovoc.none.fl_str_mv Pronóstico del tiempo
Weather forecasting
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_8340
description ABSTRACT : A predictive Fasciola hepatica model, based on the growing degree day-water budget (GDD-WB) concept and the known biological requirements of the parasite, was developed within a geographical information system (GIS) in Colombia. Climate-based forecast index (CFI) values were calculated and represented in a national-scale, climate grid (18 x 18 km) using ArcGIS 9.3. A mask overlay was used to exclude unsuitable areas where mean annual temperature exceeded 25 °C, the upper threshold for development and propagation of the F. hepatica life cycle. The model was then validated and further developed by studies limited to one department in northwest Colombia. F. hepatica prevalence data was obtained from a 2008-2010 survey in 10 municipalities of 6,016 dairy cattle at 673 herd study sites, for which global positioning system coordinates were recorded. The CFI map results were compared to F. hepatica environmental risk models for the survey data points that had over 5% prevalence (231 of the 673 sites) at the 1 km2 scale using two independent approaches: (i) a GIS map query based on satellite data parameters including elevation, enhanced vegetation index and land surface temperature day-night difference; and (ii) an ecological niche model (MaxEnt), for which geographic point coordinates of F. hepatica survey farms were used with BioClim data as environmental variables to develop a probability map. The predicted risk pattern of both approaches was similar to that seen in the forecast index grid. The temporal risk, evaluated by the monthly CFIs and a daily GDD-WB forecast software for 2007 and 2008, revealed a major July-August to January transmission period with considerable inter-annual differences.
publishDate 2012
dc.date.issued.none.fl_str_mv 2012
dc.date.accessioned.none.fl_str_mv 2021-11-14T20:47:33Z
dc.date.available.none.fl_str_mv 2021-11-14T20:47:33Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.hasversion.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.local.spa.fl_str_mv Artículo de investigación
format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv Valencia-López N, Malone JB, Carmona CG, Velásquez LE. Climate-based risk models for Fasciola hepatica in Colombia. Geospat Health. 2012 Sep;6(3):S67-85. doi: 10.4081/gh.2012.125.
dc.identifier.issn.none.fl_str_mv 1827-1987
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/24104
dc.identifier.doi.none.fl_str_mv 10.4081/gh.2012.125.
dc.identifier.eissn.none.fl_str_mv 1970-7096
identifier_str_mv Valencia-López N, Malone JB, Carmona CG, Velásquez LE. Climate-based risk models for Fasciola hepatica in Colombia. Geospat Health. 2012 Sep;6(3):S67-85. doi: 10.4081/gh.2012.125.
1827-1987
10.4081/gh.2012.125.
1970-7096
url http://hdl.handle.net/10495/24104
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Geospat Health
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc/2.5/co/
dc.rights.accessrights.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc/2.5/co/
http://purl.org/coar/access_right/c_abf2
https://creativecommons.org/licenses/by-nc/4.0/
dc.format.extent.spa.fl_str_mv 11
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Università degli Studi di Napoli Federico II, Dipartimento di Medicina Veterinaria e Produzioni Animali
dc.publisher.group.spa.fl_str_mv Microbiología Ambiental
Programa de Estudio y Control de Enfermedades Tropicales (PECET)
dc.publisher.place.spa.fl_str_mv Nápoles, Italia
institution Universidad de Antioquia
bitstream.url.fl_str_mv http://bibliotecadigital.udea.edu.co/bitstream/10495/24104/1/ValenciaNatalia_2012_ClimateModelsColombia.pdf
http://bibliotecadigital.udea.edu.co/bitstream/10495/24104/2/license_rdf
http://bibliotecadigital.udea.edu.co/bitstream/10495/24104/3/license.txt
bitstream.checksum.fl_str_mv 9a12577bd18e0a99a23c693de364eb95
c0c92b0ffc8b7d22d9cf56754a416a76
8a4605be74aa9ea9d79846c1fba20a33
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional Universidad de Antioquia
repository.mail.fl_str_mv andres.perez@udea.edu.co
_version_ 1812173208319688704
spelling Valencia López, Natalia EugeniaMalone, John B.Gómez Carmona, CatalinaVelásquez Trujillo, Luz Elena2021-11-14T20:47:33Z2021-11-14T20:47:33Z2012Valencia-López N, Malone JB, Carmona CG, Velásquez LE. Climate-based risk models for Fasciola hepatica in Colombia. Geospat Health. 2012 Sep;6(3):S67-85. doi: 10.4081/gh.2012.125.1827-1987http://hdl.handle.net/10495/2410410.4081/gh.2012.125.1970-7096ABSTRACT : A predictive Fasciola hepatica model, based on the growing degree day-water budget (GDD-WB) concept and the known biological requirements of the parasite, was developed within a geographical information system (GIS) in Colombia. Climate-based forecast index (CFI) values were calculated and represented in a national-scale, climate grid (18 x 18 km) using ArcGIS 9.3. A mask overlay was used to exclude unsuitable areas where mean annual temperature exceeded 25 °C, the upper threshold for development and propagation of the F. hepatica life cycle. The model was then validated and further developed by studies limited to one department in northwest Colombia. F. hepatica prevalence data was obtained from a 2008-2010 survey in 10 municipalities of 6,016 dairy cattle at 673 herd study sites, for which global positioning system coordinates were recorded. The CFI map results were compared to F. hepatica environmental risk models for the survey data points that had over 5% prevalence (231 of the 673 sites) at the 1 km2 scale using two independent approaches: (i) a GIS map query based on satellite data parameters including elevation, enhanced vegetation index and land surface temperature day-night difference; and (ii) an ecological niche model (MaxEnt), for which geographic point coordinates of F. hepatica survey farms were used with BioClim data as environmental variables to develop a probability map. The predicted risk pattern of both approaches was similar to that seen in the forecast index grid. The temporal risk, evaluated by the monthly CFIs and a daily GDD-WB forecast software for 2007 and 2008, revealed a major July-August to January transmission period with considerable inter-annual differences.COL0040189COL001509911application/pdfengUniversità degli Studi di Napoli Federico II, Dipartimento di Medicina Veterinaria e Produzioni AnimaliMicrobiología AmbientalPrograma de Estudio y Control de Enfermedades Tropicales (PECET)Nápoles, Italiainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc/4.0/Climate-based risk models for Fasciola hepatica in ColombiaFasciola hepaticaGeographic Information SystemsSistemas de Información GeográficaColombiaVectores de EnfermedadesDisease VectorsModelos TeóricosModels, TheoreticalClimaClimatePronóstico del tiempoWeather forecastinghttp://aims.fao.org/aos/agrovoc/c_8340Geospat HealthGeospatial Health758563ORIGINALValenciaNatalia_2012_ClimateModelsColombia.pdfValenciaNatalia_2012_ClimateModelsColombia.pdfArtículo de investigaciónapplication/pdf514234http://bibliotecadigital.udea.edu.co/bitstream/10495/24104/1/ValenciaNatalia_2012_ClimateModelsColombia.pdf9a12577bd18e0a99a23c693de364eb95MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8933http://bibliotecadigital.udea.edu.co/bitstream/10495/24104/2/license_rdfc0c92b0ffc8b7d22d9cf56754a416a76MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/24104/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/24104oai:bibliotecadigital.udea.edu.co:10495/241042022-04-22 10:21:16.014Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.coTk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=