Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia
ABSTARCT: Pregnant women frequently show low-density Plasmodium infections that require more sensitive methods for accurate diagnosis and early treatment of malaria. This is particularly relevant in low-malaria transmission areas, where intermittent preventive treatment is not recommended. Molecular...
- Autores:
-
Vasquez Cardona, Ana Maria
Zuluaga Idarraga, Lina Marcela
Tobon Castaño, Alberto
Posada Vélez, Maritza Paola
Vélez Tobón, Gabriel Jaime
González Jiménez, Iveth Jimena
Campillo Pérez, Ana Karina
Ding, Xavier
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2018
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- spa
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/12926
- Acceso en línea:
- http://hdl.handle.net/10495/12926
- Palabra clave:
- Malaria in pregnancy
Diagnostics, Rapid diagnostic test
Rapid diagnostic test
Light microscopy
Loop mediated isothermal amplifcatio
Polymerase chain reaction
- Rights
- openAccess
- License
- Atribución 2.5
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UDEA2 |
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|
dc.title.spa.fl_str_mv |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
title |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
spellingShingle |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia Malaria in pregnancy Diagnostics, Rapid diagnostic test Rapid diagnostic test Light microscopy Loop mediated isothermal amplifcatio Polymerase chain reaction |
title_short |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
title_full |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
title_fullStr |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
title_full_unstemmed |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
title_sort |
Diagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia |
dc.creator.fl_str_mv |
Vasquez Cardona, Ana Maria Zuluaga Idarraga, Lina Marcela Tobon Castaño, Alberto Posada Vélez, Maritza Paola Vélez Tobón, Gabriel Jaime González Jiménez, Iveth Jimena Campillo Pérez, Ana Karina Ding, Xavier |
dc.contributor.author.none.fl_str_mv |
Vasquez Cardona, Ana Maria Zuluaga Idarraga, Lina Marcela Tobon Castaño, Alberto Posada Vélez, Maritza Paola Vélez Tobón, Gabriel Jaime González Jiménez, Iveth Jimena Campillo Pérez, Ana Karina Ding, Xavier |
dc.subject.none.fl_str_mv |
Malaria in pregnancy Diagnostics, Rapid diagnostic test Rapid diagnostic test Light microscopy Loop mediated isothermal amplifcatio Polymerase chain reaction |
topic |
Malaria in pregnancy Diagnostics, Rapid diagnostic test Rapid diagnostic test Light microscopy Loop mediated isothermal amplifcatio Polymerase chain reaction |
description |
ABSTARCT: Pregnant women frequently show low-density Plasmodium infections that require more sensitive methods for accurate diagnosis and early treatment of malaria. This is particularly relevant in low-malaria transmission areas, where intermittent preventive treatment is not recommended. Molecular methods, such as polymerase chain reaction (PCR) are highly sensitive, but require sophisticated equipment and advanced training. Instead, loop mediated isothermal amplifcation (LAMP) provides an opportunity for molecular detection of malaria infections in remote endemic areas, outside a reference laboratory. The aim of the study is to evaluate the performance of LAMP for the screening of malaria in pregnant women in Colombia. Methods: This is a nested prospective study that uses data and samples from a larger cross-sectional project conducted from May 2016 to January 2017 in three Colombian endemic areas (El Bagre, Quibdó, and Tumaco). A total of 531 peripheral and placental samples from pregnant women self-presenting at local hospitals for antenatal care visits, at delivery or seeking medical care for suspected malaria were collected. Samples were analysed for Plasmodium parasites by light microscopy (LM), rapid diagnostic test (RDT) and LAMP. Diagnostic accuracy endpoints (sensitivity, specifcity, predictive values, and kappa scores) of LM, RDT and LAMP were compared with nested PCR (nPCR) as the reference standard. Results: In peripheral samples, LAMP showed an improved sensitivity (100.0%) when compared with LM 79.5% and RDT 76.9% (p<0.01), particularly in afebrile women, for which LAMP sensitivity was two-times higher than LM and RDT. Overall agreement among LAMP and nPCR was high (kappa value=1.0). Specifcity was similar in all tests (100%). In placental blood, LAMP evidenced a four-fold improvement in sensitivity (88.9%) when compared with LM and RDT (22.2%), being the only method, together with nPCR, able to detect placental infections in peripheral blood. Conclusions: LAMP is a simple, rapid and accurate molecular tool for detecting gestational and placental malaria, being able to overcome the limited sensitivity of LM and RDT. These fndings could guide maternal health programs in low-transmission settings to integrate LAMP in their surveillance systems for the active detection of low-density infections and asymptomatic malaria cases. |
publishDate |
2018 |
dc.date.issued.none.fl_str_mv |
2018 |
dc.date.accessioned.none.fl_str_mv |
2020-01-09T20:34:05Z |
dc.date.available.none.fl_str_mv |
2020-01-09T20:34:05Z |
dc.type.spa.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.hasversion.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
dc.type.local.spa.fl_str_mv |
Artículo de investigación |
format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
status_str |
publishedVersion |
dc.identifier.citation.spa.fl_str_mv |
Vásquez Cardona AM, Zuluaga Idarraga LM, Tobón Castaño A, Posada Vélez MP, Vélez Tobón GJ, González Jiménez IJ, ... Ding X. Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia. Malar J. 2018 Jul 13; 17(1):262. doi: 10.1186/s12936-018-2403-5 |
dc.identifier.issn.none.fl_str_mv |
1475-2875 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10495/12926 |
dc.identifier.doi.none.fl_str_mv |
10.1186/s12936-018-2403-5 |
identifier_str_mv |
Vásquez Cardona AM, Zuluaga Idarraga LM, Tobón Castaño A, Posada Vélez MP, Vélez Tobón GJ, González Jiménez IJ, ... Ding X. Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia. Malar J. 2018 Jul 13; 17(1):262. doi: 10.1186/s12936-018-2403-5 1475-2875 10.1186/s12936-018-2403-5 |
url |
http://hdl.handle.net/10495/12926 |
dc.language.iso.spa.fl_str_mv |
spa |
language |
spa |
dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Malar J |
dc.rights.*.fl_str_mv |
Atribución 2.5 |
dc.rights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by/2.5/co/ |
dc.rights.accessrights.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.creativecommons.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
rights_invalid_str_mv |
Atribución 2.5 http://creativecommons.org/licenses/by/2.5/co/ http://purl.org/coar/access_right/c_abf2 https://creativecommons.org/licenses/by/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.extent.spa.fl_str_mv |
10 |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
BioMed Central Ltd. |
dc.publisher.group.spa.fl_str_mv |
Grupo Malaria |
dc.publisher.place.spa.fl_str_mv |
Reino Unido |
institution |
Universidad de Antioquia |
bitstream.url.fl_str_mv |
http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/1/VasquezAna_2018_ScreeningMalariaPregnancy.pdf http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/2/license_url http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/3/license_text http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/4/license_rdf http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/5/license.txt |
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MD5 MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio Institucional Universidad de Antioquia |
repository.mail.fl_str_mv |
andres.perez@udea.edu.co |
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1812173247821643776 |
spelling |
Vasquez Cardona, Ana MariaZuluaga Idarraga, Lina MarcelaTobon Castaño, AlbertoPosada Vélez, Maritza PaolaVélez Tobón, Gabriel JaimeGonzález Jiménez, Iveth JimenaCampillo Pérez, Ana KarinaDing, Xavier2020-01-09T20:34:05Z2020-01-09T20:34:05Z2018Vásquez Cardona AM, Zuluaga Idarraga LM, Tobón Castaño A, Posada Vélez MP, Vélez Tobón GJ, González Jiménez IJ, ... Ding X. Diagnostic accuracy of loop-mediated isothermal amplification (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in Colombia. Malar J. 2018 Jul 13; 17(1):262. doi: 10.1186/s12936-018-2403-51475-2875http://hdl.handle.net/10495/1292610.1186/s12936-018-2403-5ABSTARCT: Pregnant women frequently show low-density Plasmodium infections that require more sensitive methods for accurate diagnosis and early treatment of malaria. This is particularly relevant in low-malaria transmission areas, where intermittent preventive treatment is not recommended. Molecular methods, such as polymerase chain reaction (PCR) are highly sensitive, but require sophisticated equipment and advanced training. Instead, loop mediated isothermal amplifcation (LAMP) provides an opportunity for molecular detection of malaria infections in remote endemic areas, outside a reference laboratory. The aim of the study is to evaluate the performance of LAMP for the screening of malaria in pregnant women in Colombia. Methods: This is a nested prospective study that uses data and samples from a larger cross-sectional project conducted from May 2016 to January 2017 in three Colombian endemic areas (El Bagre, Quibdó, and Tumaco). A total of 531 peripheral and placental samples from pregnant women self-presenting at local hospitals for antenatal care visits, at delivery or seeking medical care for suspected malaria were collected. Samples were analysed for Plasmodium parasites by light microscopy (LM), rapid diagnostic test (RDT) and LAMP. Diagnostic accuracy endpoints (sensitivity, specifcity, predictive values, and kappa scores) of LM, RDT and LAMP were compared with nested PCR (nPCR) as the reference standard. Results: In peripheral samples, LAMP showed an improved sensitivity (100.0%) when compared with LM 79.5% and RDT 76.9% (p<0.01), particularly in afebrile women, for which LAMP sensitivity was two-times higher than LM and RDT. Overall agreement among LAMP and nPCR was high (kappa value=1.0). Specifcity was similar in all tests (100%). In placental blood, LAMP evidenced a four-fold improvement in sensitivity (88.9%) when compared with LM and RDT (22.2%), being the only method, together with nPCR, able to detect placental infections in peripheral blood. Conclusions: LAMP is a simple, rapid and accurate molecular tool for detecting gestational and placental malaria, being able to overcome the limited sensitivity of LM and RDT. These fndings could guide maternal health programs in low-transmission settings to integrate LAMP in their surveillance systems for the active detection of low-density infections and asymptomatic malaria cases.10application/pdfspaBioMed Central Ltd.Grupo MalariaReino Unidoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85Atribución 2.5info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by/4.0/Malaria in pregnancyDiagnostics, Rapid diagnostic testRapid diagnostic testLight microscopyLoop mediated isothermal amplifcatioPolymerase chain reactionDiagnostic accuracy of loop-mediated isothermal amplifcation (LAMP) for screening malaria in peripheral and placental blood samples from pregnant women in ColombiaMalar JMalaria Journal111171ORIGINALVasquezAna_2018_ScreeningMalariaPregnancy.pdfVasquezAna_2018_ScreeningMalariaPregnancy.pdfArtículo de investigaciónapplication/pdf1201654http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/1/VasquezAna_2018_ScreeningMalariaPregnancy.pdfac95545da1dd658ee0cb92a576f404cbMD51CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/2/license_url4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-80http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/3/license_textd41d8cd98f00b204e9800998ecf8427eMD53license_rdflicense_rdfapplication/rdf+xml; charset=utf-80http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/4/license_rdfd41d8cd98f00b204e9800998ecf8427eMD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/12926/5/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5510495/12926oai:bibliotecadigital.udea.edu.co:10495/129262021-03-24 20:42:36.113Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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 |