Genetic diversity of Colombian sheep by microsatellite markers
RESUMEN: In Colombia the sheep production systems are managed under extensive conditions and mainly correspond to peasant production systems so their genetic management has led to increased homozygosity and hence productivity loss. The aim of this study was to determine the genetic diversity in 549...
- Autores:
-
Ocampo Gallego, Ricardo José
Cardona Cadavid, Henry
Martínez, Rodrigo A.
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2016
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/11033
- Acceso en línea:
- http://hdl.handle.net/10495/11033
- Palabra clave:
- Genetic
Diversity
Microsatellite
Colombian Sheep
- Rights
- openAccess
- License
- Atribución 2.5 Colombia
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Genetic diversity of Colombian sheep by microsatellite markers |
| title |
Genetic diversity of Colombian sheep by microsatellite markers |
| spellingShingle |
Genetic diversity of Colombian sheep by microsatellite markers Genetic Diversity Microsatellite Colombian Sheep |
| title_short |
Genetic diversity of Colombian sheep by microsatellite markers |
| title_full |
Genetic diversity of Colombian sheep by microsatellite markers |
| title_fullStr |
Genetic diversity of Colombian sheep by microsatellite markers |
| title_full_unstemmed |
Genetic diversity of Colombian sheep by microsatellite markers |
| title_sort |
Genetic diversity of Colombian sheep by microsatellite markers |
| dc.creator.fl_str_mv |
Ocampo Gallego, Ricardo José Cardona Cadavid, Henry Martínez, Rodrigo A. |
| dc.contributor.author.none.fl_str_mv |
Ocampo Gallego, Ricardo José Cardona Cadavid, Henry Martínez, Rodrigo A. |
| dc.subject.none.fl_str_mv |
Genetic Diversity Microsatellite Colombian Sheep |
| topic |
Genetic Diversity Microsatellite Colombian Sheep |
| description |
RESUMEN: In Colombia the sheep production systems are managed under extensive conditions and mainly correspond to peasant production systems so their genetic management has led to increased homozygosity and hence productivity loss. The aim of this study was to determine the genetic diversity in 549 individuals corresponding to 13 sheep breeds in Colombia, using a panel of 11 microsatellite molecular markers. One hundred and fifty seven alleles were found (average of 14.27 alleles/locus), with a range of observed and expected heterozygosity from 0.44 to 0.84 and 0.67 to 0.86, respectively. Thirty-three of 143 Hardy Weinberg tests performed showed significant deviations (p < 0.05) due to a general lack of heterozygous individuals. The Fis ranged from 0.01 in Corriedale to 0.15 for the Persian Black Head breed, suggesting that there are presenting low to moderate levels of inbreeding. Overall, Colombian sheep showed high levels of genetic diversity which is very important for future selection and animalbreeding programs. |
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2016 |
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2016 |
| dc.date.accessioned.none.fl_str_mv |
2019-05-09T14:34:08Z |
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2019-05-09T14:34:08Z |
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info:eu-repo/semantics/article |
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Artículo de investigación |
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Ocampo R, Cardona H, Martínez R. Genetic diversity of Colombian sheep by microsatellite markers. Chilean Journal of Agricultural Research. 2016; 76(1): 40-7 |
| dc.identifier.issn.none.fl_str_mv |
0718-5820 |
| dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10495/11033 |
| dc.identifier.doi.none.fl_str_mv |
10.4067/S0718-58392016000100006 |
| dc.identifier.eissn.none.fl_str_mv |
0718-5839 |
| identifier_str_mv |
Ocampo R, Cardona H, Martínez R. Genetic diversity of Colombian sheep by microsatellite markers. Chilean Journal of Agricultural Research. 2016; 76(1): 40-7 0718-5820 10.4067/S0718-58392016000100006 0718-5839 |
| url |
http://hdl.handle.net/10495/11033 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Chil. J. Agric. Res. |
| dc.rights.*.fl_str_mv |
Atribución 2.5 Colombia |
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info:eu-repo/semantics/openAccess |
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https://creativecommons.org/licenses/by/2.5/co/ |
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Atribución 2.5 Colombia https://creativecommons.org/licenses/by/2.5/co/ http://purl.org/coar/access_right/c_abf2 https://creativecommons.org/licenses/by/4.0/ |
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openAccess |
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application/pdf |
| dc.publisher.spa.fl_str_mv |
Instituto de Investigaciones Agropecuarias |
| dc.publisher.group.spa.fl_str_mv |
Grupo de Investigación en Agrociencias, Biodiversidad y Territorio GAMMA |
| dc.publisher.place.spa.fl_str_mv |
Santiago de Chile, Chile |
| institution |
Universidad de Antioquia |
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Ocampo Gallego, Ricardo JoséCardona Cadavid, HenryMartínez, Rodrigo A.2019-05-09T14:34:08Z2019-05-09T14:34:08Z2016Ocampo R, Cardona H, Martínez R. Genetic diversity of Colombian sheep by microsatellite markers. Chilean Journal of Agricultural Research. 2016; 76(1): 40-70718-5820http://hdl.handle.net/10495/1103310.4067/S0718-583920160001000060718-5839RESUMEN: In Colombia the sheep production systems are managed under extensive conditions and mainly correspond to peasant production systems so their genetic management has led to increased homozygosity and hence productivity loss. The aim of this study was to determine the genetic diversity in 549 individuals corresponding to 13 sheep breeds in Colombia, using a panel of 11 microsatellite molecular markers. One hundred and fifty seven alleles were found (average of 14.27 alleles/locus), with a range of observed and expected heterozygosity from 0.44 to 0.84 and 0.67 to 0.86, respectively. Thirty-three of 143 Hardy Weinberg tests performed showed significant deviations (p < 0.05) due to a general lack of heterozygous individuals. The Fis ranged from 0.01 in Corriedale to 0.15 for the Persian Black Head breed, suggesting that there are presenting low to moderate levels of inbreeding. Overall, Colombian sheep showed high levels of genetic diversity which is very important for future selection and animalbreeding programs.COL0006779application/pdfengInstituto de Investigaciones AgropecuariasGrupo de Investigación en Agrociencias, Biodiversidad y Territorio GAMMASantiago de Chile, Chileinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85Atribución 2.5 Colombiainfo:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by/4.0/GeneticDiversityMicrosatelliteColombian SheepGenetic diversity of Colombian sheep by microsatellite markersChil. J. Agric. Res.Chilean Journal of Agricultural Research4047761CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849https://bibliotecadigital.udea.edu.co/bitstream/10495/11033/2/license_url4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-80https://bibliotecadigital.udea.edu.co/bitstream/10495/11033/3/license_textd41d8cd98f00b204e9800998ecf8427eMD53license_rdflicense_rdfLicenciaapplication/rdf+xml; charset=utf-80https://bibliotecadigital.udea.edu.co/bitstream/10495/11033/4/license_rdfd41d8cd98f00b204e9800998ecf8427eMD54LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/11033/5/license.txt8a4605be74aa9ea9d79846c1fba20a33MD55ORIGINALOcampoRicardo_2016_GeneticSheepMicrosatellite.pdfOcampoRicardo_2016_GeneticSheepMicrosatellite.pdfArtículo de investigaciónapplication/pdf3316761https://bibliotecadigital.udea.edu.co/bitstream/10495/11033/1/OcampoRicardo_2016_GeneticSheepMicrosatellite.pdfd8f35cf3c5579d69d707474c3085e407MD5110495/11033oai:bibliotecadigital.udea.edu.co:10495/110332022-10-30 07:52:34.006Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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 |