Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples

ABSTRACT : The thermally dimorphic fungus Histoplasma capsulatum is the causative agent of histoplasmosis, one of the most prevalent endemic mycosis in the Americas. In tropical regions, agro-ecosystems require organic matter replacement, therefore, the use of organic fertilizers has increased disre...

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Autores:
Gómez Londoño, Luisa Fernanda
Arango Arteaga, Myrtha
McEwen Ochoa, Juan Guillermo
Gómez Guzmán, Oscar Mauricio
Zuluaga Rodríguez, Alejandra
Peláez Jaramillo, Carlos Alberto
Acevedo Ruiz, José Miguel
Taylor, María
Jiménez Alzate, María del Pilar
Tipo de recurso:
Article of investigation
Fecha de publicación:
2019
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/31126
Acceso en línea:
https://hdl.handle.net/10495/31126
Palabra clave:
Agricultura
Agriculture
Ciencias de la Tierra
Earth Sciences
Histoplasmosis
Compostaje
Composting
Ciencias del medio ambiente
Environmental sciences
Fertilizantes orgánicos
Organic fertilizers
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_b2b5dd97e959f10b2df140084bce6f94
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/31126
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
title Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
spellingShingle Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
Agricultura
Agriculture
Ciencias de la Tierra
Earth Sciences
Histoplasmosis
Compostaje
Composting
Ciencias del medio ambiente
Environmental sciences
Fertilizantes orgánicos
Organic fertilizers
title_short Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
title_full Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
title_fullStr Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
title_full_unstemmed Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
title_sort Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples
dc.creator.fl_str_mv Gómez Londoño, Luisa Fernanda
Arango Arteaga, Myrtha
McEwen Ochoa, Juan Guillermo
Gómez Guzmán, Oscar Mauricio
Zuluaga Rodríguez, Alejandra
Peláez Jaramillo, Carlos Alberto
Acevedo Ruiz, José Miguel
Taylor, María
Jiménez Alzate, María del Pilar
dc.contributor.author.none.fl_str_mv Gómez Londoño, Luisa Fernanda
Arango Arteaga, Myrtha
McEwen Ochoa, Juan Guillermo
Gómez Guzmán, Oscar Mauricio
Zuluaga Rodríguez, Alejandra
Peláez Jaramillo, Carlos Alberto
Acevedo Ruiz, José Miguel
Taylor, María
Jiménez Alzate, María del Pilar
dc.subject.decs.none.fl_str_mv Agricultura
Agriculture
Ciencias de la Tierra
Earth Sciences
Histoplasmosis
Compostaje
Composting
topic Agricultura
Agriculture
Ciencias de la Tierra
Earth Sciences
Histoplasmosis
Compostaje
Composting
Ciencias del medio ambiente
Environmental sciences
Fertilizantes orgánicos
Organic fertilizers
dc.subject.lemb.none.fl_str_mv Ciencias del medio ambiente
Environmental sciences
Fertilizantes orgánicos
Organic fertilizers
description ABSTRACT : The thermally dimorphic fungus Histoplasma capsulatum is the causative agent of histoplasmosis, one of the most prevalent endemic mycosis in the Americas. In tropical regions, agro-ecosystems require organic matter replacement, therefore, the use of organic fertilizers has increased disregarding the fact that certain number of such fertilizers might be contaminated with the fungus, and with their handling resulting in human cases and even outbreaks of histoplasmosis. Additionally, in Colombia, chicken manure is the most common raw material used in the production of organic fertilizers. In this work, we reported the isolation of this fungus from chicken manure, and genetically compared with 42 clinical isolates. The genetically compared environmental isolates grouped together with the clinical ones. Our result suggests that chicken manure may be one of H. capsulatum infection sources. Also, the phylogenetic analyses done with other H. capsulatum isolates indicate that the Colombian isolates are widely distributed in the relational tree thus reveling towards the great genetic diversity among the H. capsulatum Colombian isolates.
publishDate 2019
dc.date.issued.none.fl_str_mv 2019
dc.date.accessioned.none.fl_str_mv 2022-10-07T15:31:54Z
dc.date.available.none.fl_str_mv 2022-10-07T15:31:54Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
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dc.type.local.spa.fl_str_mv Artículo de investigación
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dc.identifier.citation.spa.fl_str_mv Gómez LF, Arango M, McEwen JG, Gómez OM, Zuluaga A, Peláez CA, Acevedo JM, Taylor ML, Jiménez MDP. Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples. Heliyon. 2019 Jul 23;5(7):e02084. doi: 10.1016/j.heliyon.2019.e02084.
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/31126
dc.identifier.doi.none.fl_str_mv 10.1016/j.heliyon.2019.e02084
dc.identifier.eissn.none.fl_str_mv 2405-8440
identifier_str_mv Gómez LF, Arango M, McEwen JG, Gómez OM, Zuluaga A, Peláez CA, Acevedo JM, Taylor ML, Jiménez MDP. Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples. Heliyon. 2019 Jul 23;5(7):e02084. doi: 10.1016/j.heliyon.2019.e02084.
10.1016/j.heliyon.2019.e02084
2405-8440
url https://hdl.handle.net/10495/31126
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Heliyon.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
http://purl.org/coar/access_right/c_abf2
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dc.format.extent.spa.fl_str_mv 8
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Elsevier
dc.publisher.group.spa.fl_str_mv Biología Celular y Molecular CIB U. de A. U. del Rosario
Grupo Interdisciplinario de Estudios Moleculares
Micología Médica y Experimental
dc.publisher.place.spa.fl_str_mv Londres, Inglaterra
institution Universidad de Antioquia
bitstream.url.fl_str_mv https://bibliotecadigital.udea.edu.co/bitstream/10495/31126/1/McEwenJuan_2019_Molecular_Epidemiology.pdf
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spelling Gómez Londoño, Luisa FernandaArango Arteaga, MyrthaMcEwen Ochoa, Juan GuillermoGómez Guzmán, Oscar MauricioZuluaga Rodríguez, AlejandraPeláez Jaramillo, Carlos AlbertoAcevedo Ruiz, José MiguelTaylor, MaríaJiménez Alzate, María del Pilar2022-10-07T15:31:54Z2022-10-07T15:31:54Z2019Gómez LF, Arango M, McEwen JG, Gómez OM, Zuluaga A, Peláez CA, Acevedo JM, Taylor ML, Jiménez MDP. Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samples. Heliyon. 2019 Jul 23;5(7):e02084. doi: 10.1016/j.heliyon.2019.e02084.https://hdl.handle.net/10495/3112610.1016/j.heliyon.2019.e020842405-8440ABSTRACT : The thermally dimorphic fungus Histoplasma capsulatum is the causative agent of histoplasmosis, one of the most prevalent endemic mycosis in the Americas. In tropical regions, agro-ecosystems require organic matter replacement, therefore, the use of organic fertilizers has increased disregarding the fact that certain number of such fertilizers might be contaminated with the fungus, and with their handling resulting in human cases and even outbreaks of histoplasmosis. Additionally, in Colombia, chicken manure is the most common raw material used in the production of organic fertilizers. In this work, we reported the isolation of this fungus from chicken manure, and genetically compared with 42 clinical isolates. The genetically compared environmental isolates grouped together with the clinical ones. Our result suggests that chicken manure may be one of H. capsulatum infection sources. Also, the phylogenetic analyses done with other H. capsulatum isolates indicate that the Colombian isolates are widely distributed in the relational tree thus reveling towards the great genetic diversity among the H. capsulatum Colombian isolates.COL0000962COL0007462COL00137098application/pdfengElsevierBiología Celular y Molecular CIB U. de A. U. del RosarioGrupo Interdisciplinario de Estudios MolecularesMicología Médica y ExperimentalLondres, Inglaterrainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-nd/4.0/Molecular epidemiology of Colombian Histoplasma capsulatum isolates obtained from human and chicken manure samplesAgriculturaAgricultureCiencias de la TierraEarth SciencesHistoplasmosisCompostajeCompostingCiencias del medio ambienteEnvironmental sciencesFertilizantes orgánicosOrganic fertilizersHeliyon.Heliyon1857ORIGINALMcEwenJuan_2019_Molecular_Epidemiology.pdfMcEwenJuan_2019_Molecular_Epidemiology.pdfArtículo de investigaciónapplication/pdf1025016https://bibliotecadigital.udea.edu.co/bitstream/10495/31126/1/McEwenJuan_2019_Molecular_Epidemiology.pdf3e4031520a0177bbe96f9909c0b23816MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstream/10495/31126/2/license_rdfb88b088d9957e670ce3b3fbe2eedbc13MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/31126/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/31126oai:bibliotecadigital.udea.edu.co:10495/311262022-10-07 10:37:11.164Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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