Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile

ABSTRACT: Latin Americans are highly heterogeneous regarding the type of Native American ancestry. Consideration of specific associations with common diseases may lead to substantial advances in unraveling of disease etiology and disease prevention. Here we investigate possible associations between...

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Autores:
Bermejo, Justo Lorenzo
Boekstegers, Felix
González Silos, Rosa
Marcelain, Katherine
Baez Benavides, Pablo
Barahona Ponce, Carol
Müller, Bettina
Ferreccio, Catterina
Koshiol, Jill
Fischer, Christine
Peil, Barbara
Sinsheimer, Janet
Fuentes Guajardo, Macarena
Barajas, Olga
González José, Rolando
Bedoya Berrío, Gabriel de Jesús
Bortolini, Maria Cátira
Canizales Quinteros, Samuel
Gallo, Carla
Ruíz Linares, Andres
Rothhammer, Francisco
Tipo de recurso:
Article of investigation
Fecha de publicación:
2017
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/23698
Acceso en línea:
http://hdl.handle.net/10495/23698
Palabra clave:
Neoplasias de la Vesícula Biliar
Gallbladder Neoplasms
Genética de Población
Genetics, Population
Mapuches
Mapuche Indians
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
id UDEA2_83cca7e11e25f82bcf311465cff4eba9
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/23698
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
title Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
spellingShingle Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
Neoplasias de la Vesícula Biliar
Gallbladder Neoplasms
Genética de Población
Genetics, Population
Mapuches
Mapuche Indians
title_short Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
title_full Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
title_fullStr Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
title_full_unstemmed Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
title_sort Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in Chile
dc.creator.fl_str_mv Bermejo, Justo Lorenzo
Boekstegers, Felix
González Silos, Rosa
Marcelain, Katherine
Baez Benavides, Pablo
Barahona Ponce, Carol
Müller, Bettina
Ferreccio, Catterina
Koshiol, Jill
Fischer, Christine
Peil, Barbara
Sinsheimer, Janet
Fuentes Guajardo, Macarena
Barajas, Olga
González José, Rolando
Bedoya Berrío, Gabriel de Jesús
Bortolini, Maria Cátira
Canizales Quinteros, Samuel
Gallo, Carla
Ruíz Linares, Andres
Rothhammer, Francisco
dc.contributor.author.none.fl_str_mv Bermejo, Justo Lorenzo
Boekstegers, Felix
González Silos, Rosa
Marcelain, Katherine
Baez Benavides, Pablo
Barahona Ponce, Carol
Müller, Bettina
Ferreccio, Catterina
Koshiol, Jill
Fischer, Christine
Peil, Barbara
Sinsheimer, Janet
Fuentes Guajardo, Macarena
Barajas, Olga
González José, Rolando
Bedoya Berrío, Gabriel de Jesús
Bortolini, Maria Cátira
Canizales Quinteros, Samuel
Gallo, Carla
Ruíz Linares, Andres
Rothhammer, Francisco
dc.subject.decs.none.fl_str_mv Neoplasias de la Vesícula Biliar
Gallbladder Neoplasms
Genética de Población
Genetics, Population
topic Neoplasias de la Vesícula Biliar
Gallbladder Neoplasms
Genética de Población
Genetics, Population
Mapuches
Mapuche Indians
dc.subject.lemb.none.fl_str_mv Mapuches
Mapuche Indians
description ABSTRACT: Latin Americans are highly heterogeneous regarding the type of Native American ancestry. Consideration of specific associations with common diseases may lead to substantial advances in unraveling of disease etiology and disease prevention. Here we investigate possible associations between the type of Native American ancestry and leading causes of death. After an aggregate-data study based on genome-wide genotype data from 1805 admixed Chileans and 639,789 deaths, we validate an identified association with gallbladder cancer relying on individual data from 64 gallbladder cancer patients, with and without a family history, and 170 healthy controls. Native American proportions were markedly underestimated when the two main types of Native American ancestry in Chile, originated from the Mapuche and Aymara indigenous peoples, were combined together. Consideration of the type of Native American ancestry was crucial to identify disease associations. Native American ancestry showed no association with gallbladder cancer mortality (P = 0.26). By contrast, each 1% increase in the Mapuche proportion represented a 3.7% increased mortality risk by gallbladder cancer (95%CI 3.1–4.3%, P = 6×10−27). Individual-data results and extensive sensitivity analyses confirmed the association between Mapuche ancestry and gallbladder cancer. Increasing Mapuche proportions were also associated with an increased mortality due to asthma and, interestingly, with a decreased mortality by diabetes. The mortality due to skin, bladder, larynx, bronchus and lung cancers increased with increasing Aymara proportions. Described methods should be considered in future studies on human population genetics and human health. Complementary individual-based studies are needed to apportion the g.
publishDate 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2021-11-02T17:52:18Z
dc.date.available.none.fl_str_mv 2021-11-02T17:52:18Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.hasversion.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.type.local.spa.fl_str_mv Artículo de investigación
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status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv Lorenzo Bermejo J, Boekstegers F, Gonza´lez Silos R, Marcelain K, Baez Benavides P, Barahona Ponce C, et al. (2017) Subtypes of Native American ancestry and leading causes of death: Mapuche ancestry-specific associations with gallbladder cancer risk in Chile. PLoS Genet 13(5): e1006756. https://doi.org/10.1371/journal. pgen.1006756
dc.identifier.issn.none.fl_str_mv 1553-7390
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/23698
dc.identifier.doi.none.fl_str_mv 10.1371/journal.pgen.1006756
dc.identifier.eissn.none.fl_str_mv 1553-7404
identifier_str_mv Lorenzo Bermejo J, Boekstegers F, Gonza´lez Silos R, Marcelain K, Baez Benavides P, Barahona Ponce C, et al. (2017) Subtypes of Native American ancestry and leading causes of death: Mapuche ancestry-specific associations with gallbladder cancer risk in Chile. PLoS Genet 13(5): e1006756. https://doi.org/10.1371/journal. pgen.1006756
1553-7390
10.1371/journal.pgen.1006756
1553-7404
url http://hdl.handle.net/10495/23698
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv PLoS Genet.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/2.5/co/
dc.rights.accessrights.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/2.5/co/
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dc.format.extent.spa.fl_str_mv 23
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Public Library of Science
dc.publisher.group.spa.fl_str_mv Genética Molecular (GENMOL)
dc.publisher.place.spa.fl_str_mv San Francisco, Estados Unidos
institution Universidad de Antioquia
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spelling Bermejo, Justo LorenzoBoekstegers, FelixGonzález Silos, RosaMarcelain, KatherineBaez Benavides, PabloBarahona Ponce, CarolMüller, BettinaFerreccio, CatterinaKoshiol, JillFischer, ChristinePeil, BarbaraSinsheimer, JanetFuentes Guajardo, MacarenaBarajas, OlgaGonzález José, RolandoBedoya Berrío, Gabriel de JesúsBortolini, Maria CátiraCanizales Quinteros, SamuelGallo, CarlaRuíz Linares, AndresRothhammer, Francisco2021-11-02T17:52:18Z2021-11-02T17:52:18Z2017Lorenzo Bermejo J, Boekstegers F, Gonza´lez Silos R, Marcelain K, Baez Benavides P, Barahona Ponce C, et al. (2017) Subtypes of Native American ancestry and leading causes of death: Mapuche ancestry-specific associations with gallbladder cancer risk in Chile. PLoS Genet 13(5): e1006756. https://doi.org/10.1371/journal. pgen.10067561553-7390http://hdl.handle.net/10495/2369810.1371/journal.pgen.10067561553-7404ABSTRACT: Latin Americans are highly heterogeneous regarding the type of Native American ancestry. Consideration of specific associations with common diseases may lead to substantial advances in unraveling of disease etiology and disease prevention. Here we investigate possible associations between the type of Native American ancestry and leading causes of death. After an aggregate-data study based on genome-wide genotype data from 1805 admixed Chileans and 639,789 deaths, we validate an identified association with gallbladder cancer relying on individual data from 64 gallbladder cancer patients, with and without a family history, and 170 healthy controls. Native American proportions were markedly underestimated when the two main types of Native American ancestry in Chile, originated from the Mapuche and Aymara indigenous peoples, were combined together. Consideration of the type of Native American ancestry was crucial to identify disease associations. Native American ancestry showed no association with gallbladder cancer mortality (P = 0.26). By contrast, each 1% increase in the Mapuche proportion represented a 3.7% increased mortality risk by gallbladder cancer (95%CI 3.1–4.3%, P = 6×10−27). Individual-data results and extensive sensitivity analyses confirmed the association between Mapuche ancestry and gallbladder cancer. Increasing Mapuche proportions were also associated with an increased mortality due to asthma and, interestingly, with a decreased mortality by diabetes. The mortality due to skin, bladder, larynx, bronchus and lung cancers increased with increasing Aymara proportions. Described methods should be considered in future studies on human population genetics and human health. Complementary individual-based studies are needed to apportion the g.COL000672323application/pdfengPublic Library of ScienceGenética Molecular (GENMOL)San Francisco, Estados Unidosinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by/4.0/Subtypes of Native American ancestry and leading causes of death: Mapuche ancestryspecific associations with gallbladder cancer risk in ChileNeoplasias de la Vesícula BiliarGallbladder NeoplasmsGenética de PoblaciónGenetics, PopulationMapuchesMapuche IndiansPLoS Genet.PLoS Genetics123135LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/23698/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD53CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927http://bibliotecadigital.udea.edu.co/bitstream/10495/23698/2/license_rdf1646d1f6b96dbbbc38035efc9239ac9cMD52ORIGINALBedoyaGabriel_2017_MapucheAncestryspecificCancer.pdfBedoyaGabriel_2017_MapucheAncestryspecificCancer.pdfArtículo de investigaciónapplication/pdf3567060http://bibliotecadigital.udea.edu.co/bitstream/10495/23698/1/BedoyaGabriel_2017_MapucheAncestryspecificCancer.pdfceb4c847214aa896e3e00b03509c222bMD5110495/23698oai:bibliotecadigital.udea.edu.co:10495/236982021-11-02 12:52:19.073Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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