Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia
ABSTRACT : Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molec...
- Autores:
-
Vanegas Múnera, Johanna Marcela
Cienfuegos Gallet, Astrid Vanessa
Ocampo Ríos, Ana María
López López, Lucelly
Corral Londoño, Helena Del
Roncancio Villamil, Gustavo Eduardo
Sierra Viana, Patricia María
Echeverri Toro, Lina María
Ospina Ospina, Sigifredo
Maldonado Lizarazo, Natalia Andrea
Robledo Restrepo, Carlos Gonzalo
Restrepo Gouzy, Andrea Victoria
Jiménez Quiceno, Judy Natalia
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2014
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/26456
- Acceso en línea:
- http://hdl.handle.net/10495/26456
- Palabra clave:
- Infecciones por Pseudomonas
Pseudomonas Infections
Pseudomonas aeruginosa
Centros de Atención Terciaria
Tertiary Care Centers
beta-Lactamasas
beta-Lactamases
Estudios Transversales
Cross-Sectional Studies
Infección Hospitalaria
Cross Infection
Proteínas Bacterianas
Bacterial Proteins
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by/2.5/co/
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|
dc.title.spa.fl_str_mv |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
title |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
spellingShingle |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia Infecciones por Pseudomonas Pseudomonas Infections Pseudomonas aeruginosa Centros de Atención Terciaria Tertiary Care Centers beta-Lactamasas beta-Lactamases Estudios Transversales Cross-Sectional Studies Infección Hospitalaria Cross Infection Proteínas Bacterianas Bacterial Proteins |
title_short |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
title_full |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
title_fullStr |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
title_full_unstemmed |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
title_sort |
Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, Colombia |
dc.creator.fl_str_mv |
Vanegas Múnera, Johanna Marcela Cienfuegos Gallet, Astrid Vanessa Ocampo Ríos, Ana María López López, Lucelly Corral Londoño, Helena Del Roncancio Villamil, Gustavo Eduardo Sierra Viana, Patricia María Echeverri Toro, Lina María Ospina Ospina, Sigifredo Maldonado Lizarazo, Natalia Andrea Robledo Restrepo, Carlos Gonzalo Restrepo Gouzy, Andrea Victoria Jiménez Quiceno, Judy Natalia |
dc.contributor.author.none.fl_str_mv |
Vanegas Múnera, Johanna Marcela Cienfuegos Gallet, Astrid Vanessa Ocampo Ríos, Ana María López López, Lucelly Corral Londoño, Helena Del Roncancio Villamil, Gustavo Eduardo Sierra Viana, Patricia María Echeverri Toro, Lina María Ospina Ospina, Sigifredo Maldonado Lizarazo, Natalia Andrea Robledo Restrepo, Carlos Gonzalo Restrepo Gouzy, Andrea Victoria Jiménez Quiceno, Judy Natalia |
dc.subject.decs.none.fl_str_mv |
Infecciones por Pseudomonas Pseudomonas Infections Pseudomonas aeruginosa Centros de Atención Terciaria Tertiary Care Centers beta-Lactamasas beta-Lactamases Estudios Transversales Cross-Sectional Studies Infección Hospitalaria Cross Infection Proteínas Bacterianas Bacterial Proteins |
topic |
Infecciones por Pseudomonas Pseudomonas Infections Pseudomonas aeruginosa Centros de Atención Terciaria Tertiary Care Centers beta-Lactamasas beta-Lactamases Estudios Transversales Cross-Sectional Studies Infección Hospitalaria Cross Infection Proteínas Bacterianas Bacterial Proteins |
description |
ABSTRACT : Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular characteristics of infections caused by carbapenem-resistant P. aeruginosa isolates in five tertiary-care hospitals in Medellín, Colombia. A cross-sectional study was conducted in five tertiary-care hospitals from June 2012 to March 2014. All hospitalized patients infected by carbapenem-resistant P. aeruginosa were included. Clinical information was obtained from medical records. Molecular analyses included PCR for detection of blaVIM, blaIMP, blaNDM, blaOXA-48, and blaKPC genes plus pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) for molecular typing. A total of 235 patients were enrolled: 91.1% of them were adults (n 214), 88.1% (n 207) had prior antibiotic use, and 14.9% (n 35) had urinary tract infections. The blaVIM-2 and blaKPC-2 genes were detected in 13.6% (n 32) and 11.5% (n 27), respectively, of all isolates. Two isolates harbored both genes simultaneously. For KPC-producing isolates, PFGE revealed closely related strains within each hospital, and sequence types (STs) ST362 and ST235 and two new STs were found by MLST. With PFGE, VIM-producing isolates appeared highly diverse, and MLST revealed ST111 in four hospitals and five new STs. These results show that KPC-producing P. aeruginosa is currently disseminating rapidly and occurring at a frequency similar to that of VIM-producing P. aeruginosa isolates (approximately 1:1 ratio) in Medellín, Colombia. Diverse genetic backgrounds among resistant strains suggest an excessive antibiotic pressure resulting in the selection of resistant strains. |
publishDate |
2014 |
dc.date.issued.none.fl_str_mv |
2014 |
dc.date.accessioned.none.fl_str_mv |
2022-03-08T16:50:27Z |
dc.date.available.none.fl_str_mv |
2022-03-08T16:50:27Z |
dc.type.spa.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.hasversion.spa.fl_str_mv |
info:eu-repo/semantics/acceptedVersion |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
dc.type.local.spa.fl_str_mv |
Artículo de investigación |
format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
status_str |
acceptedVersion |
dc.identifier.citation.spa.fl_str_mv |
Vanegas JM, Cienfuegos AV, Ocampo AM, López L, del Corral H, Roncancio G, Sierra P, Echeverri-Toro L, Ospina S, Maldonado N, Robledo C, Restrepo A, Jiménez JN. Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia. J Clin Microbiol. 2014 Nov;52(11):3978-86. doi: 10.1128/JCM.01879-14. |
dc.identifier.issn.none.fl_str_mv |
0095-1137 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10495/26456 |
dc.identifier.doi.none.fl_str_mv |
10.1128/JCM.01879-14 |
dc.identifier.eissn.none.fl_str_mv |
1098-660X |
identifier_str_mv |
Vanegas JM, Cienfuegos AV, Ocampo AM, López L, del Corral H, Roncancio G, Sierra P, Echeverri-Toro L, Ospina S, Maldonado N, Robledo C, Restrepo A, Jiménez JN. Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia. J Clin Microbiol. 2014 Nov;52(11):3978-86. doi: 10.1128/JCM.01879-14. 0095-1137 10.1128/JCM.01879-14 1098-660X |
url |
http://hdl.handle.net/10495/26456 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
J. Clin. Microbiol. |
dc.rights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by/2.5/co/ |
dc.rights.accessrights.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.creativecommons.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by/2.5/co/ http://purl.org/coar/access_right/c_abf2 https://creativecommons.org/licenses/by/4.0/ |
dc.format.extent.spa.fl_str_mv |
9 |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
American Society for Microbiology |
dc.publisher.group.spa.fl_str_mv |
Grupo de Investigación en Microbiología Básica y Aplicada-Microba Microbiología Molecular |
dc.publisher.place.spa.fl_str_mv |
Washington, Estados Unidos |
institution |
Universidad de Antioquia |
bitstream.url.fl_str_mv |
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spelling |
Vanegas Múnera, Johanna MarcelaCienfuegos Gallet, Astrid VanessaOcampo Ríos, Ana MaríaLópez López, LucellyCorral Londoño, Helena DelRoncancio Villamil, Gustavo EduardoSierra Viana, Patricia MaríaEcheverri Toro, Lina MaríaOspina Ospina, SigifredoMaldonado Lizarazo, Natalia AndreaRobledo Restrepo, Carlos GonzaloRestrepo Gouzy, Andrea VictoriaJiménez Quiceno, Judy Natalia2022-03-08T16:50:27Z2022-03-08T16:50:27Z2014Vanegas JM, Cienfuegos AV, Ocampo AM, López L, del Corral H, Roncancio G, Sierra P, Echeverri-Toro L, Ospina S, Maldonado N, Robledo C, Restrepo A, Jiménez JN. Similar frequencies of Pseudomonas aeruginosa isolates producing KPC and VIM carbapenemases in diverse genetic clones at tertiary-care hospitals in Medellín, Colombia. J Clin Microbiol. 2014 Nov;52(11):3978-86. doi: 10.1128/JCM.01879-14.0095-1137http://hdl.handle.net/10495/2645610.1128/JCM.01879-141098-660XABSTRACT : Carbapenem-resistant Pseudomonas aeruginosa has become a serious health threat worldwide due to the limited options available for its treatment. Understanding its epidemiology contributes to the control of antibiotic resistance. The aim of this study was to describe the clinical and molecular characteristics of infections caused by carbapenem-resistant P. aeruginosa isolates in five tertiary-care hospitals in Medellín, Colombia. A cross-sectional study was conducted in five tertiary-care hospitals from June 2012 to March 2014. All hospitalized patients infected by carbapenem-resistant P. aeruginosa were included. Clinical information was obtained from medical records. Molecular analyses included PCR for detection of blaVIM, blaIMP, blaNDM, blaOXA-48, and blaKPC genes plus pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) for molecular typing. A total of 235 patients were enrolled: 91.1% of them were adults (n 214), 88.1% (n 207) had prior antibiotic use, and 14.9% (n 35) had urinary tract infections. The blaVIM-2 and blaKPC-2 genes were detected in 13.6% (n 32) and 11.5% (n 27), respectively, of all isolates. Two isolates harbored both genes simultaneously. For KPC-producing isolates, PFGE revealed closely related strains within each hospital, and sequence types (STs) ST362 and ST235 and two new STs were found by MLST. With PFGE, VIM-producing isolates appeared highly diverse, and MLST revealed ST111 in four hospitals and five new STs. These results show that KPC-producing P. aeruginosa is currently disseminating rapidly and occurring at a frequency similar to that of VIM-producing P. aeruginosa isolates (approximately 1:1 ratio) in Medellín, Colombia. Diverse genetic backgrounds among resistant strains suggest an excessive antibiotic pressure resulting in the selection of resistant strains.COL0013746COL01261319application/pdfengAmerican Society for MicrobiologyGrupo de Investigación en Microbiología Básica y Aplicada-MicrobaMicrobiología MolecularWashington, Estados Unidosinfo:eu-repo/semantics/acceptedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigacióninfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by/4.0/Similar Frequencies of Pseudomonas aeruginosa Isolates Producing KPC and VIM Carbapenemases in Diverse Genetic Clones at Tertiary-Care Hospitals in Medellin, ColombiaInfecciones por PseudomonasPseudomonas InfectionsPseudomonas aeruginosaCentros de Atención TerciariaTertiary Care Centersbeta-Lactamasasbeta-LactamasesEstudios TransversalesCross-Sectional StudiesInfección HospitalariaCross InfectionProteínas BacterianasBacterial ProteinsJ. Clin. Microbiol.Journal of Clinical Microbiology397839865211CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927http://bibliotecadigital.udea.edu.co/bitstream/10495/26456/2/license_rdf1646d1f6b96dbbbc38035efc9239ac9cMD52ORIGINALVanegasJohanna_2014_PseudomonasHospitalsMedellín.pdfVanegasJohanna_2014_PseudomonasHospitalsMedellín.pdfArtículo de investigaciónapplication/pdf811084http://bibliotecadigital.udea.edu.co/bitstream/10495/26456/1/VanegasJohanna_2014_PseudomonasHospitalsMedell%c3%adn.pdf0d76b16e95b0bee4db685eaa99aaf2f0MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/26456/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/26456oai:bibliotecadigital.udea.edu.co:10495/264562022-04-22 10:23:18.02Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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 |