Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models

ABSTRACT: genetic parameters of lactation curve in dairy cattle can be analyzed as longitudinal data using random regression models (RRM). Objective: the goal of the present study was to estimate variance components and genetic parameters for milk production in Holstein cattle located in Antioquia p...

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Autores:
Herrera Ríos, Ana Cristina
Múnera Bedoya, Oscar David
Cerón Muñoz, Mario Fernando
Tipo de recurso:
Article of investigation
Fecha de publicación:
2012
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/8071
Acceso en línea:
http://hdl.handle.net/10495/8071
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openAccess
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Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)
id UDEA2_6e515552bd3528468de2669b70746227
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/8071
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
dc.title.alternative.spa.fl_str_mv Componentes de varianza y parámetros genéticos para producción de leche en ganado Holstein de Antioquia (Colombia), utilizando modelos de regresión aleatoria
title Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
spellingShingle Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
title_short Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
title_full Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
title_fullStr Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
title_full_unstemmed Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
title_sort Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models
dc.creator.fl_str_mv Herrera Ríos, Ana Cristina
Múnera Bedoya, Oscar David
Cerón Muñoz, Mario Fernando
dc.contributor.author.none.fl_str_mv Herrera Ríos, Ana Cristina
Múnera Bedoya, Oscar David
Cerón Muñoz, Mario Fernando
description ABSTRACT: genetic parameters of lactation curve in dairy cattle can be analyzed as longitudinal data using random regression models (RRM). Objective: the goal of the present study was to estimate variance components and genetic parameters for milk production in Holstein cattle located in Antioquia province using RRM. Methods: a total of 3,158 monthly controls corresponding to 741 first lactations of Holstein cows were evaluated. The RRM included several Legendre polynomials to estimate the population fixed-curve coefficients and to predict the direct additive genetic and the permanent environment effects. Additionally, heterogeneous residual variances were considered by grouping the days in milk into 5 and 10 classes. Eleven models with first to fourth order polynomials were used to describe the direct additive genetic and the permanent environment effects. The residue was modeled by considering five variance classes. Models were compared using Schwartz Bayesian and Akaike s information criteria. Results: the best model was obtained by fourth order Legendre polynomials to estimate the fixed curve of the population, genetic and permanent environment effects. In addition, 5 kinds of days were used to model the residual variances. The variance for the animal genetic, phenotypic, permanent environment, and residual effects decreased as days increased. Milk production heritability in early lactation was 0.36, increasing until 95 days (0.41), with subsequent decrease, reaching 0.10 at 245 days. The permanent environment variance values decreased to 125 days (0.13) and then increased to 215 days (0.21), to finish at the last stage of lactation with values of 0.05. The genetic and phenotypic correlations between milk yields at different days of lactation decreased as days intervals increased. Conclusion: the findings of this study suggest that in the first 150 days of lactation animals better express their genetic potential and that after 180 days there is greater environmental effect.
publishDate 2012
dc.date.issued.none.fl_str_mv 2012
dc.date.accessioned.none.fl_str_mv 2017-08-30T19:31:12Z
dc.date.available.none.fl_str_mv 2017-08-30T19:31:12Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
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dc.type.local.spa.fl_str_mv Artículo de investigación
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dc.identifier.citation.spa.fl_str_mv Herrera Ríos AC, Múnera Bedoya OD, Cerón Muñoz MF. Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models. Rev. Colomb. Cienc. Pecu. 2012; 26(2): 90-97
dc.identifier.issn.none.fl_str_mv 0120-0690
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/8071
dc.identifier.eissn.none.fl_str_mv 2256-2958
identifier_str_mv Herrera Ríos AC, Múnera Bedoya OD, Cerón Muñoz MF. Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models. Rev. Colomb. Cienc. Pecu. 2012; 26(2): 90-97
0120-0690
2256-2958
url http://hdl.handle.net/10495/8071
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Rev. Colomb. Cienc. Pecu.
dc.rights.*.fl_str_mv Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv https://creativecommons.org/licenses/by-nc-sa/2.5/co/
dc.rights.accessrights.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0/
rights_invalid_str_mv Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)
https://creativecommons.org/licenses/by-nc-sa/2.5/co/
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eu_rights_str_mv openAccess
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad de Antioquia, Facultad de Ciencias Agrarias
dc.publisher.group.spa.fl_str_mv Grupo de Investigación en Agrociencias, Biodiversidad y Territorio GAMMA
dc.publisher.place.spa.fl_str_mv Medellín, Colombia
institution Universidad de Antioquia
bitstream.url.fl_str_mv http://bibliotecadigital.udea.edu.co/bitstream/10495/8071/1/HerreraAna-2012_VarianceGeneticHolstein.pdf
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spelling Herrera Ríos, Ana CristinaMúnera Bedoya, Oscar DavidCerón Muñoz, Mario Fernando2017-08-30T19:31:12Z2017-08-30T19:31:12Z2012Herrera Ríos AC, Múnera Bedoya OD, Cerón Muñoz MF. Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression models. Rev. Colomb. Cienc. Pecu. 2012; 26(2): 90-970120-0690http://hdl.handle.net/10495/80712256-2958ABSTRACT: genetic parameters of lactation curve in dairy cattle can be analyzed as longitudinal data using random regression models (RRM). Objective: the goal of the present study was to estimate variance components and genetic parameters for milk production in Holstein cattle located in Antioquia province using RRM. Methods: a total of 3,158 monthly controls corresponding to 741 first lactations of Holstein cows were evaluated. The RRM included several Legendre polynomials to estimate the population fixed-curve coefficients and to predict the direct additive genetic and the permanent environment effects. Additionally, heterogeneous residual variances were considered by grouping the days in milk into 5 and 10 classes. Eleven models with first to fourth order polynomials were used to describe the direct additive genetic and the permanent environment effects. The residue was modeled by considering five variance classes. Models were compared using Schwartz Bayesian and Akaike s information criteria. Results: the best model was obtained by fourth order Legendre polynomials to estimate the fixed curve of the population, genetic and permanent environment effects. In addition, 5 kinds of days were used to model the residual variances. The variance for the animal genetic, phenotypic, permanent environment, and residual effects decreased as days increased. Milk production heritability in early lactation was 0.36, increasing until 95 days (0.41), with subsequent decrease, reaching 0.10 at 245 days. The permanent environment variance values decreased to 125 days (0.13) and then increased to 215 days (0.21), to finish at the last stage of lactation with values of 0.05. The genetic and phenotypic correlations between milk yields at different days of lactation decreased as days intervals increased. Conclusion: the findings of this study suggest that in the first 150 days of lactation animals better express their genetic potential and that after 180 days there is greater environmental effect.RESUMEN: los parámetros genéticos de la curva de lactancia en ganado de leche pueden ser analizados como datos longitudinales usando modelos de regresión aleatoria (RRM). Objetivo: el objetivo de este estudio fue estimar componentes de varianza y parámetros genéticos para la producción de leche en vacas Holstein en el departamento de Antioquia, utilizando RRM. Métodos: se utilizaron 3.158 controles mensuales de 741 primeras lactancias. Se usaron RRM con diferentes grados de polinomios de Legendre para estimar los coeficientes de la curva fija de la población y la predicción de los efectos genético aditivo directo y de ambiente permanente y se consideraron 5 y 10 clases de varianzas residuales heterogéneas. Se emplearon once modelos con polinomios de primer a cuarto orden, para describir los efectos genético aditivo directo y ambiente permanente. Los modelos fueron comparados mediante los criterios de información bayesiano de Schwartz y de Akaike. Resultados: el mejor modelo presentó polinomios de cuarto orden 4, 4 y 4 de la curva fija, del efecto genético aditivo y de ambiente permanente, respectivamente, y con 5 clases de varianzas heterogéneas (444.het5). La varianzas para los efectos genético animal, fenotípico, de ambiente permanente y residual disminuyeron con el aumento de los días. La heredabilidad de la producción de leche al inicio de la lactancia fue de 0,36 y fue aumentando hasta los 95 días (0,41), con posterior disminución, llegando a 0,10 a los 245 días. Para la trayectoria de la proporción de ambiente permanente los valores descendieron hasta los 125 días (con 0,13), luego aumentaron hasta los 215 días (con 0,21), para finalizar en la última etapa de la lactancia con valores de 0,05. Las correlaciones genéticas y fenotípicas entre producciones de leche en los diferentes días de lactancia disminuyeron con el aumento del intervalo de los días. Conclusión: los resultados encontrados en este estudio sugieren que en los primeros 150 días de lactancia los animales expresan mejor su potencial, y que después de 180 días hay mayor impacto ambiental.COL0006779application/pdfengUniversidad de Antioquia, Facultad de Ciencias AgrariasGrupo de Investigación en Agrociencias, Biodiversidad y Territorio GAMMAMedellín, Colombiainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)info:eu-repo/semantics/openAccesshttps://creativecommons.org/licenses/by-nc-sa/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-sa/4.0/Variance components and genetic parameters for milk production of Holstein cattle in Antioquia (Colombia) using random regression modelsComponentes de varianza y parámetros genéticos para producción de leche en ganado Holstein de Antioquia (Colombia), utilizando modelos de regresión aleatoriaRev. Colomb. Cienc. Pecu.Revista Colombiana de Ciencias Pecuarias9097262ORIGINALHerreraAna-2012_VarianceGeneticHolstein.pdfHerreraAna-2012_VarianceGeneticHolstein.pdfArtículo de investigaciónapplication/pdf360967http://bibliotecadigital.udea.edu.co/bitstream/10495/8071/1/HerreraAna-2012_VarianceGeneticHolstein.pdf22b961550ed677968b13cfeb3f4d9d67MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/8071/5/license.txt8a4605be74aa9ea9d79846c1fba20a33MD55CC-LICENSElicense_urllicense_urltext/plain; charset=utf-849http://bibliotecadigital.udea.edu.co/bitstream/10495/8071/2/license_url4afdbb8c545fd630ea7db775da747b2fMD52license_textlicense_texttext/html; charset=utf-80http://bibliotecadigital.udea.edu.co/bitstream/10495/8071/3/license_textd41d8cd98f00b204e9800998ecf8427eMD53license_rdflicense_rdfapplication/rdf+xml; charset=utf-80http://bibliotecadigital.udea.edu.co/bitstream/10495/8071/4/license_rdfd41d8cd98f00b204e9800998ecf8427eMD5410495/8071oai:bibliotecadigital.udea.edu.co:10495/80712021-05-21 20:28:40.892Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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