Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia

ABSTRACT: To study the molecular epidemiology of human immunodeficiency virus type 1 (HIV-1) strains in Medellín, Colombia, 115 HIV-1-positive individuals who were recruited from an HIV outpatient hospital (Universitario San Vicente de Paul) during the period from July 2001 to January 2002 were geno...

Full description

Autores:
Sánchez Vásquez, Gloria Inés
Bautista, Christian T.
Eyzaguirre, Lindsay
Carrion, Gladys
Arias, Sonia
Sateren, Warren B.
Negrete, Mónica
Montano, Silvia M.
Sánchez, José L.
Carr, Jean K.
Tipo de recurso:
Article of investigation
Fecha de publicación:
2006
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/32098
Acceso en línea:
https://hdl.handle.net/10495/32098
Palabra clave:
Colombia - epidemiología
Colombia - epidemiology
Cartilla de ADN
DNA Primers
ADN Viral
DNA, Viral
Infecciones por VIH
HIV Infections
VIH-1
HIV-1
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
id UDEA2_6b76bb7135b881a283a2dc6a68afb665
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/32098
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
title Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
spellingShingle Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
Colombia - epidemiología
Colombia - epidemiology
Cartilla de ADN
DNA Primers
ADN Viral
DNA, Viral
Infecciones por VIH
HIV Infections
VIH-1
HIV-1
title_short Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
title_full Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
title_fullStr Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
title_full_unstemmed Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
title_sort Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia
dc.creator.fl_str_mv Sánchez Vásquez, Gloria Inés
Bautista, Christian T.
Eyzaguirre, Lindsay
Carrion, Gladys
Arias, Sonia
Sateren, Warren B.
Negrete, Mónica
Montano, Silvia M.
Sánchez, José L.
Carr, Jean K.
dc.contributor.author.none.fl_str_mv Sánchez Vásquez, Gloria Inés
Bautista, Christian T.
Eyzaguirre, Lindsay
Carrion, Gladys
Arias, Sonia
Sateren, Warren B.
Negrete, Mónica
Montano, Silvia M.
Sánchez, José L.
Carr, Jean K.
dc.subject.decs.none.fl_str_mv Colombia - epidemiología
Colombia - epidemiology
Cartilla de ADN
DNA Primers
ADN Viral
DNA, Viral
Infecciones por VIH
HIV Infections
VIH-1
HIV-1
topic Colombia - epidemiología
Colombia - epidemiology
Cartilla de ADN
DNA Primers
ADN Viral
DNA, Viral
Infecciones por VIH
HIV Infections
VIH-1
HIV-1
description ABSTRACT: To study the molecular epidemiology of human immunodeficiency virus type 1 (HIV-1) strains in Medellín, Colombia, 115 HIV-1-positive individuals who were recruited from an HIV outpatient hospital (Universitario San Vicente de Paul) during the period from July 2001 to January 2002 were genotyped. All samples were analyzed by envelope heteroduplex mobility assay and found to be subtype B. Twenty-four samples were randomly selected for sequencing of the protease and the reverse transcriptase regions; all isolates were found to be subtype B. Phylogenetic analysis of seven nearly full-length genomes showed that all samples were subtype B. This study shows that the HIV epidemic in Colombia continues to be dominated by the subtype B virus. The predominance of subtype B genotypes of HIV-1 strains in Medellín resembles what is seen in the nearby countries of Peru, Ecuador, and Venezuela.
publishDate 2006
dc.date.issued.none.fl_str_mv 2006
dc.date.accessioned.none.fl_str_mv 2022-11-16T20:24:06Z
dc.date.available.none.fl_str_mv 2022-11-16T20:24:06Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
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dc.type.local.spa.fl_str_mv Artículo de investigación
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status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv Sanchez GI, Bautista CT, Eyzaguirre L, Carrion G, Arias S, Sateren WB, Negrete M, Montano SM, Sanchez JL, Carr JK. Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia. Am J Trop Med Hyg. 2006 Apr;74(4):674-7.
dc.identifier.issn.none.fl_str_mv 0002-9637
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/32098
dc.identifier.doi.none.fl_str_mv 10.4269/ajtmh.2006.74.674
dc.identifier.eissn.none.fl_str_mv 1476-1645
identifier_str_mv Sanchez GI, Bautista CT, Eyzaguirre L, Carrion G, Arias S, Sateren WB, Negrete M, Montano SM, Sanchez JL, Carr JK. Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia. Am J Trop Med Hyg. 2006 Apr;74(4):674-7.
0002-9637
10.4269/ajtmh.2006.74.674
1476-1645
url https://hdl.handle.net/10495/32098
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Am. J. Trop. Med. Hyg.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/2.5/co/
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dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/2.5/co/
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dc.format.extent.spa.fl_str_mv 4
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv American Society of Tropical Medicine and Hygiene
dc.publisher.group.spa.fl_str_mv Infección y Cáncer
dc.publisher.place.spa.fl_str_mv Baltimore, Estados Unidos
institution Universidad de Antioquia
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repository.name.fl_str_mv Repositorio Institucional Universidad de Antioquia
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spelling Sánchez Vásquez, Gloria InésBautista, Christian T.Eyzaguirre, LindsayCarrion, GladysArias, SoniaSateren, Warren B.Negrete, MónicaMontano, Silvia M.Sánchez, José L.Carr, Jean K.2022-11-16T20:24:06Z2022-11-16T20:24:06Z2006Sanchez GI, Bautista CT, Eyzaguirre L, Carrion G, Arias S, Sateren WB, Negrete M, Montano SM, Sanchez JL, Carr JK. Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, Colombia. Am J Trop Med Hyg. 2006 Apr;74(4):674-7.0002-9637https://hdl.handle.net/10495/3209810.4269/ajtmh.2006.74.6741476-1645ABSTRACT: To study the molecular epidemiology of human immunodeficiency virus type 1 (HIV-1) strains in Medellín, Colombia, 115 HIV-1-positive individuals who were recruited from an HIV outpatient hospital (Universitario San Vicente de Paul) during the period from July 2001 to January 2002 were genotyped. All samples were analyzed by envelope heteroduplex mobility assay and found to be subtype B. Twenty-four samples were randomly selected for sequencing of the protease and the reverse transcriptase regions; all isolates were found to be subtype B. Phylogenetic analysis of seven nearly full-length genomes showed that all samples were subtype B. This study shows that the HIV epidemic in Colombia continues to be dominated by the subtype B virus. The predominance of subtype B genotypes of HIV-1 strains in Medellín resembles what is seen in the nearby countries of Peru, Ecuador, and Venezuela.COL00123284application/pdfengAmerican Society of Tropical Medicine and HygieneInfección y CáncerBaltimore, Estados Unidosinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by/4.0/Molecular epidemiology of human immunodeficiency virus-infected individuals in Medellin, ColombiaColombia - epidemiologíaColombia - epidemiologyCartilla de ADNDNA PrimersADN ViralDNA, ViralInfecciones por VIHHIV InfectionsVIH-1HIV-1Am. J. Trop. Med. Hyg.American Journal of Tropical Medicine and Hygiene674677744ORIGINALSanchez_Gloria_2006_EpidemiologyImmunodeficiencyVirusMedellin.pdfSanchez_Gloria_2006_EpidemiologyImmunodeficiencyVirusMedellin.pdfArtículo de investigaciónapplication/pdf87158https://bibliotecadigital.udea.edu.co/bitstream/10495/32098/1/Sanchez_Gloria_2006_EpidemiologyImmunodeficiencyVirusMedellin.pdf40b00b78b2a4bc555df1717b91902c19MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstream/10495/32098/2/license_rdf1646d1f6b96dbbbc38035efc9239ac9cMD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/32098/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/32098oai:bibliotecadigital.udea.edu.co:10495/320982022-12-28 17:57:14.64Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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