Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia

ABSTRACT: Objectives: The aim of this study was to describe the genotypes and the main characteristics of community-acquired pneumonia (CAP) caused by Mycoplasma pneumoniae in hospitalized children in Medellín and neighboring municipalities during the period 2011–2012. Methods: The M. pneumoniae gen...

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Autores:
Copete Rengifo, Angela Rocio Yiseth
Aguilar Perez, Yudy Alexandra
Rueda Vallejo, Zulma Vanessa
Vélez Giraldo, Lázaro Agustín
Tipo de recurso:
Article of investigation
Fecha de publicación:
2018
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/28325
Acceso en línea:
http://hdl.handle.net/10495/28325
Palabra clave:
Mycoplasma pneumoniae
Macrolides
Macrólidos
Child
Niño
Pneumonia
Neumonía
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_44a9ba8c9873097df7707650f3a2fe8b
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/28325
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
title Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
spellingShingle Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
Mycoplasma pneumoniae
Macrolides
Macrólidos
Child
Niño
Pneumonia
Neumonía
title_short Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
title_full Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
title_fullStr Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
title_full_unstemmed Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
title_sort Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-Colombia
dc.creator.fl_str_mv Copete Rengifo, Angela Rocio Yiseth
Aguilar Perez, Yudy Alexandra
Rueda Vallejo, Zulma Vanessa
Vélez Giraldo, Lázaro Agustín
dc.contributor.author.none.fl_str_mv Copete Rengifo, Angela Rocio Yiseth
Aguilar Perez, Yudy Alexandra
Rueda Vallejo, Zulma Vanessa
Vélez Giraldo, Lázaro Agustín
dc.subject.decs.none.fl_str_mv Mycoplasma pneumoniae
Macrolides
Macrólidos
Child
Niño
Pneumonia
Neumonía
topic Mycoplasma pneumoniae
Macrolides
Macrólidos
Child
Niño
Pneumonia
Neumonía
description ABSTRACT: Objectives: The aim of this study was to describe the genotypes and the main characteristics of community-acquired pneumonia (CAP) caused by Mycoplasma pneumoniae in hospitalized children in Medellín and neighboring municipalities during the period 2011–2012. Methods: The M. pneumoniae genotype was determined by PCR and sequencing of the p1 and 23S Rrna genes from induced sputum samples and nasopharyngeal swabs (NPS). Samples were obtained from children with CAP who were hospitalized in 13 healthcare centers. In addition, a spatio-temporal analysis was performed to identify the potential risk areas and clustering of the cases over time. Results: A variant of type 2 was the dominant genotype in the induced sputum (96.1%) and NPS (89.3%) samples; the type 1 variant was identified in 3.9% and 10.7% of these samples, respectively. No strains with mutations in the 23S rRNA gene associated with macrolide resistance were found. The cases in Medellín were mainly concentrated in the northeastern areas and western districts. However, no temporal relationship was found among these cases. Conclusions: A variant of type 2 of M. pneumoniae prevailed among children with CAP during the study period. No strains with mutations associated with macrolide resistance were found.
publishDate 2018
dc.date.issued.none.fl_str_mv 2018
dc.date.accessioned.none.fl_str_mv 2022-05-10T20:50:47Z
dc.date.available.none.fl_str_mv 2022-05-10T20:50:47Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.hasversion.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.local.spa.fl_str_mv Artículo de investigación
format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.issn.none.fl_str_mv 1201-9712
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/28325
dc.identifier.doi.none.fl_str_mv 10.1016/j.ijid.2017.11.019
identifier_str_mv 1201-9712
10.1016/j.ijid.2017.11.019
url http://hdl.handle.net/10495/28325
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Int. J. Infect. Dis.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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dc.format.extent.spa.fl_str_mv 8
dc.format.mimetype.spa.fl_str_mv aplication/pdf
dc.publisher.spa.fl_str_mv Elsevier; International Society for Infectious Diseases
dc.publisher.group.spa.fl_str_mv GRIPE: Grupo Investigador de Problemas en Enfermedades Infecciosas
dc.publisher.place.spa.fl_str_mv Hamilton, Canadá
institution Universidad de Antioquia
bitstream.url.fl_str_mv http://bibliotecadigital.udea.edu.co/bitstream/10495/28325/2/license_rdf
http://bibliotecadigital.udea.edu.co/bitstream/10495/28325/3/license.txt
http://bibliotecadigital.udea.edu.co/bitstream/10495/28325/1/CopeteAngela_2018_MacrolideResistantMycoplasma.pdf
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spelling Copete Rengifo, Angela Rocio YisethAguilar Perez, Yudy AlexandraRueda Vallejo, Zulma VanessaVélez Giraldo, Lázaro Agustín2022-05-10T20:50:47Z2022-05-10T20:50:47Z20181201-9712http://hdl.handle.net/10495/2832510.1016/j.ijid.2017.11.019ABSTRACT: Objectives: The aim of this study was to describe the genotypes and the main characteristics of community-acquired pneumonia (CAP) caused by Mycoplasma pneumoniae in hospitalized children in Medellín and neighboring municipalities during the period 2011–2012. Methods: The M. pneumoniae genotype was determined by PCR and sequencing of the p1 and 23S Rrna genes from induced sputum samples and nasopharyngeal swabs (NPS). Samples were obtained from children with CAP who were hospitalized in 13 healthcare centers. In addition, a spatio-temporal analysis was performed to identify the potential risk areas and clustering of the cases over time. Results: A variant of type 2 was the dominant genotype in the induced sputum (96.1%) and NPS (89.3%) samples; the type 1 variant was identified in 3.9% and 10.7% of these samples, respectively. No strains with mutations in the 23S rRNA gene associated with macrolide resistance were found. The cases in Medellín were mainly concentrated in the northeastern areas and western districts. However, no temporal relationship was found among these cases. Conclusions: A variant of type 2 of M. pneumoniae prevailed among children with CAP during the study period. No strains with mutations associated with macrolide resistance were found.00057448aplication/pdfengElsevier; International Society for Infectious DiseasesGRIPE: Grupo Investigador de Problemas en Enfermedades InfecciosasHamilton, Canadáinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-nd/4.0/Genotyping and Macrolide Resistance of Mycoplasma Pneumoniae Identified in Children with Community-Acquired Pneumonia (CAP) in Medellín-ColombiaMycoplasma pneumoniaeMacrolidesMacrólidosChildNiñoPneumoniaNeumoníaInt. J. Infect. Dis.International Journal of Infectious Diseases11312066CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823http://bibliotecadigital.udea.edu.co/bitstream/10495/28325/2/license_rdfb88b088d9957e670ce3b3fbe2eedbc13MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748http://bibliotecadigital.udea.edu.co/bitstream/10495/28325/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD53ORIGINALCopeteAngela_2018_MacrolideResistantMycoplasma.pdfCopeteAngela_2018_MacrolideResistantMycoplasma.pdfArtículo de investigaciónapplication/pdf1297957http://bibliotecadigital.udea.edu.co/bitstream/10495/28325/1/CopeteAngela_2018_MacrolideResistantMycoplasma.pdfdfbf2016cf6865e190d033fe46dd4f4bMD5110495/28325oai:bibliotecadigital.udea.edu.co:10495/283252022-05-10 15:50:47.488Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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