Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)

ABSTRACT: Background: The apolipoprotein E (APOE) gene plays a pivotal role in cholesterol metabolism. Since the discovery of the APOE*2 and APOE*4 as the major susceptibility alleles for several diseases including dyslipidemia, atherosclerosis, coronary heart disease, late-onset and early Alzheimer...

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Autores:
Vélez Pardo, Carlos Alberto
Jiménez del Río, Marlene
Bedoya Berrío, Gabriel de Jesús
Rojas Montoya, Winston
Tipo de recurso:
Article of investigation
Fecha de publicación:
2014
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/30936
Acceso en línea:
https://hdl.handle.net/10495/30936
Palabra clave:
Apolipoproteínas
Apolipoproteins
Polimorfismo Genético
Polymorphism, Genetic
Apolipoproteínas E
Apolipoproteins E
Frecuencia de los Genes
Gene Frequency
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_34f65860fec2be4cd0b5669f29503999
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/30936
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
title Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
spellingShingle Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
Apolipoproteínas
Apolipoproteins
Polimorfismo Genético
Polymorphism, Genetic
Apolipoproteínas E
Apolipoproteins E
Frecuencia de los Genes
Gene Frequency
title_short Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
title_full Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
title_fullStr Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
title_full_unstemmed Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
title_sort Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)
dc.creator.fl_str_mv Vélez Pardo, Carlos Alberto
Jiménez del Río, Marlene
Bedoya Berrío, Gabriel de Jesús
Rojas Montoya, Winston
dc.contributor.author.none.fl_str_mv Vélez Pardo, Carlos Alberto
Jiménez del Río, Marlene
Bedoya Berrío, Gabriel de Jesús
Rojas Montoya, Winston
dc.subject.decs.none.fl_str_mv Apolipoproteínas
Apolipoproteins
Polimorfismo Genético
Polymorphism, Genetic
Apolipoproteínas E
Apolipoproteins E
Frecuencia de los Genes
Gene Frequency
topic Apolipoproteínas
Apolipoproteins
Polimorfismo Genético
Polymorphism, Genetic
Apolipoproteínas E
Apolipoproteins E
Frecuencia de los Genes
Gene Frequency
description ABSTRACT: Background: The apolipoprotein E (APOE) gene plays a pivotal role in cholesterol metabolism. Since the discovery of the APOE*2 and APOE*4 as the major susceptibility alleles for several diseases including dyslipidemia, atherosclerosis, coronary heart disease, late-onset and early Alzheimer’s disease, the APOE genotype might be considered as a potential predictive factor for both epidemiological research and diagnosis. Aim: The aim of this study is to report on the polymorphism of the APOE gene in the ‘‘Paisa’’ population from northwest Colombia (Antioquia) to obtain a population baseline of the existing variation in this locus. Method: One thousand and one healthy voluntaries were genotyped for the APOE polymorphism using polymerase chain reaction–restriction fragment length polymorphism technique. Results: The APOE*3/*3 genotype presented the highest frequency (66.33%) and the APOE*4/*4 had the lowest frequency (1.89%). Genotype frequencies comply with Hardy–Weinberg expectations. Allele frequencies obtained for APOE*2, APOE*3 and APOE*4 were 0.075 ± 0.005 (95% CI ¼ 0.063–0.086), 0.814 ± 0.009 (0.797–0.831) and 0.111 ± 0.007 (0.098–0.125), respectively. Conclusion: Although globally the high-to-low APOE frequency follows the E*34E*44E*2 trend, the present APOE frequency data is in disagreement with some reports from SouthAmerican countries.
publishDate 2014
dc.date.issued.none.fl_str_mv 2014
dc.date.accessioned.none.fl_str_mv 2022-09-27T22:22:29Z
dc.date.available.none.fl_str_mv 2022-09-27T22:22:29Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.hasversion.spa.fl_str_mv info:eu-repo/semantics/acceptedVersion
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dc.type.local.spa.fl_str_mv Artículo de investigación
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status_str acceptedVersion
dc.identifier.citation.spa.fl_str_mv Vélez-Pardo, Carlos & Rojas, Winston & Rio, Marlene & Bedoya, Gabriel. (2014). Distribution of APOE polymorphism in the "Paisa'' population from northwest Colombia (Antioquia). Annals of human biology. 42. 1-4. 10.3109/03014460.2014.932846.
dc.identifier.issn.none.fl_str_mv 0301-4460
10.3109/03014460.2014.932846
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/30936
dc.identifier.eissn.none.fl_str_mv 1464-5033
identifier_str_mv Vélez-Pardo, Carlos & Rojas, Winston & Rio, Marlene & Bedoya, Gabriel. (2014). Distribution of APOE polymorphism in the "Paisa'' population from northwest Colombia (Antioquia). Annals of human biology. 42. 1-4. 10.3109/03014460.2014.932846.
0301-4460
10.3109/03014460.2014.932846
1464-5033
url https://hdl.handle.net/10495/30936
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Ann. Hum. Biol.
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
dc.rights.accessrights.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.creativecommons.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
http://purl.org/coar/access_right/c_abf2
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dc.format.extent.spa.fl_str_mv 4
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Society for the Study of Human Biology (SSHB)
Taylor & Francis
dc.publisher.group.spa.fl_str_mv Genética Molecular (GENMOL)
Grupo de Neurociencias de Antioquia
dc.publisher.place.spa.fl_str_mv Londres, Inglaterra
institution Universidad de Antioquia
bitstream.url.fl_str_mv https://bibliotecadigital.udea.edu.co/bitstream/10495/30936/1/VelezCarlos_2014_DistribucionPolimorfismoAPOE.pdf
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spelling Vélez Pardo, Carlos AlbertoJiménez del Río, MarleneBedoya Berrío, Gabriel de JesúsRojas Montoya, Winston2022-09-27T22:22:29Z2022-09-27T22:22:29Z2014Vélez-Pardo, Carlos & Rojas, Winston & Rio, Marlene & Bedoya, Gabriel. (2014). Distribution of APOE polymorphism in the "Paisa'' population from northwest Colombia (Antioquia). Annals of human biology. 42. 1-4. 10.3109/03014460.2014.932846.0301-446010.3109/03014460.2014.932846https://hdl.handle.net/10495/309361464-5033ABSTRACT: Background: The apolipoprotein E (APOE) gene plays a pivotal role in cholesterol metabolism. Since the discovery of the APOE*2 and APOE*4 as the major susceptibility alleles for several diseases including dyslipidemia, atherosclerosis, coronary heart disease, late-onset and early Alzheimer’s disease, the APOE genotype might be considered as a potential predictive factor for both epidemiological research and diagnosis. Aim: The aim of this study is to report on the polymorphism of the APOE gene in the ‘‘Paisa’’ population from northwest Colombia (Antioquia) to obtain a population baseline of the existing variation in this locus. Method: One thousand and one healthy voluntaries were genotyped for the APOE polymorphism using polymerase chain reaction–restriction fragment length polymorphism technique. Results: The APOE*3/*3 genotype presented the highest frequency (66.33%) and the APOE*4/*4 had the lowest frequency (1.89%). Genotype frequencies comply with Hardy–Weinberg expectations. Allele frequencies obtained for APOE*2, APOE*3 and APOE*4 were 0.075 ± 0.005 (95% CI ¼ 0.063–0.086), 0.814 ± 0.009 (0.797–0.831) and 0.111 ± 0.007 (0.098–0.125), respectively. Conclusion: Although globally the high-to-low APOE frequency follows the E*34E*44E*2 trend, the present APOE frequency data is in disagreement with some reports from SouthAmerican countries.COL0006723COL00107444application/pdfengSociety for the Study of Human Biology (SSHB)Taylor & FrancisGenética Molecular (GENMOL)Grupo de Neurociencias de AntioquiaLondres, Inglaterrainfo:eu-repo/semantics/acceptedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigacióninfo:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-nd/4.0/Distribution of APOE polymorphism in the ‘‘Paisa’’ population from northwest Colombia (Antioquia)ApolipoproteínasApolipoproteinsPolimorfismo GenéticoPolymorphism, GeneticApolipoproteínas EApolipoproteins EFrecuencia de los GenesGene FrequencyAnn. Hum. Biol.Annals of Human Biology14422Colombia. Ministerio de Ciencia, Tecnología e Innovacióngrid.433658.f1115-041-8113ORIGINALVelezCarlos_2014_DistribucionPolimorfismoAPOE.pdfVelezCarlos_2014_DistribucionPolimorfismoAPOE.pdfArtículo de investigaciónapplication/pdf196882https://bibliotecadigital.udea.edu.co/bitstream/10495/30936/1/VelezCarlos_2014_DistribucionPolimorfismoAPOE.pdf748d9cb5d57dea8be9d21de395e50fa8MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstream/10495/30936/2/license_rdfb88b088d9957e670ce3b3fbe2eedbc13MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/30936/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/30936oai:bibliotecadigital.udea.edu.co:10495/309362022-09-27 17:26:19.459Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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