Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
ABSTRACT : The S5-methylation test, an alternative to cytology and HPV16/18 genotyping to triage high-risk HPV-positive (hrHPV+) women, has not been widely validated in lowmiddle-income countries (LMICs). We compared S5 to HPV16/18 and cytology to detect cervical intraepithelial neoplasia Grade 2 or...
- Autores:
-
Ramírez Pineda, Arianis Tatiana
Sánchez Vásquez, Gloria Inés
Nedjai, Belinda
Agudelo Fernández, María Cecilia
Brentnall, Adam
Cuschieri, Kate
Castañeda Vanegas, Kelly Melisa
Cuzick, Jack
Lorincz, Attila
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2020
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/31136
- Acceso en línea:
- https://hdl.handle.net/10495/31136
- Palabra clave:
- Biomarcadores
Biomarkers
Neoplasias del Cuello Uterino
Uterine Cervical Neoplasms
Metilación de ADN
DNA Methylation
Pruebas de ADN del Papillomavirus Humano
Human Papillomavirus DNA Tests
Triaje
Triage
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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oai:bibliotecadigital.udea.edu.co:10495/31136 |
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UDEA2 |
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Repositorio UdeA |
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|
dc.title.spa.fl_str_mv |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
title |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
spellingShingle |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country Biomarcadores Biomarkers Neoplasias del Cuello Uterino Uterine Cervical Neoplasms Metilación de ADN DNA Methylation Pruebas de ADN del Papillomavirus Humano Human Papillomavirus DNA Tests Triaje Triage |
title_short |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
title_full |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
title_fullStr |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
title_full_unstemmed |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
title_sort |
Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country |
dc.creator.fl_str_mv |
Ramírez Pineda, Arianis Tatiana Sánchez Vásquez, Gloria Inés Nedjai, Belinda Agudelo Fernández, María Cecilia Brentnall, Adam Cuschieri, Kate Castañeda Vanegas, Kelly Melisa Cuzick, Jack Lorincz, Attila |
dc.contributor.author.none.fl_str_mv |
Ramírez Pineda, Arianis Tatiana Sánchez Vásquez, Gloria Inés Nedjai, Belinda Agudelo Fernández, María Cecilia Brentnall, Adam Cuschieri, Kate Castañeda Vanegas, Kelly Melisa Cuzick, Jack Lorincz, Attila |
dc.subject.decs.none.fl_str_mv |
Biomarcadores Biomarkers Neoplasias del Cuello Uterino Uterine Cervical Neoplasms Metilación de ADN DNA Methylation Pruebas de ADN del Papillomavirus Humano Human Papillomavirus DNA Tests Triaje Triage |
topic |
Biomarcadores Biomarkers Neoplasias del Cuello Uterino Uterine Cervical Neoplasms Metilación de ADN DNA Methylation Pruebas de ADN del Papillomavirus Humano Human Papillomavirus DNA Tests Triaje Triage |
description |
ABSTRACT : The S5-methylation test, an alternative to cytology and HPV16/18 genotyping to triage high-risk HPV-positive (hrHPV+) women, has not been widely validated in lowmiddle-income countries (LMICs). We compared S5 to HPV16/18 and cytology to detect cervical intraepithelial neoplasia Grade 2 or worse (CIN2+) and CIN3+ in hrHPV + women selected from a randomized pragmatic trial of 2661 Colombian women with an earlier-borderline abnormal cytology. We included all hrHPV+ CIN2 and CIN3+ cases (n = 183) age matched to 183 <CIN2 hrHPV+. Baseline specimens were HPVgenotyped and tested by S5-methylation, blinded to cytology, histology and initial HPV results. We evaluated the test performance of predefined S5-classifier (cut-point 0.8) and a post hoc classifier at a different cut-point (3.1). S5 sensitivity for CIN2+ was 82% (95% confidence interval [CI] 76.4-87.5) and for CIN3+ 77.08% (95% CI 65.19-88.97). S5 sensitivity was higher than HPV16/18 sensitivity (48.1%, 95% CI 40.85-55.33) or cytology (31.21%, 95% CI 24.50-37.93) but with lower specificity (35%, 95% CI 28.1-42). At cut-point 3.1, S5 sensitivity for CIN2+ (55.2%, 95% CI 48-62.4) or CIN3+ (64.6%, 95% CI 51.0-78.1) was also superior to HPV16/18 (P < .05) or cytology (P < .0001). At this cut-point S5 specificity (76%, 95% CI 69.8-82.1 for <CIN2) was higher than HPV16/18 (67.21%, 95% CI 60.41-74.01, P = .0062) and similar to cytology (75.57%, 95% CI 69.34-81.79, P = 1). HPV16/18 plus cytology sensitivity was similar to S5 for CIN3+, however, false-positive rate was higher (50.27% vs.24.04%). High sensitivity is crucial in LMICs, S5-methylation exceeded HPV16/18 or cytology sensitivity with comparable specificity for CIN2+ and CIN3+ in hrHPV positive Colombian women. Furthermore, S5 triage had comparable sensitivity and significantly fewer false positives than cytology and HPV16/18 combination. |
publishDate |
2020 |
dc.date.issued.none.fl_str_mv |
2020 |
dc.date.accessioned.none.fl_str_mv |
2022-10-07T17:49:48Z |
dc.date.available.none.fl_str_mv |
2022-10-07T17:49:48Z |
dc.type.spa.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.coarversion.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.hasversion.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
dc.type.local.spa.fl_str_mv |
Artículo de investigación |
format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
status_str |
publishedVersion |
dc.identifier.citation.spa.fl_str_mv |
Ramírez AT, Sánchez GI, Nedjai B, Agudelo MC, Brentnall AR, Cuschieri K, Castañeda KM, Cuzick J, Lorincz AT; ASC-US-COL Trial Group. Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country. Int J Cancer. 2021 Mar 15;148(6):1383-1393. doi: 10.1002/ijc.33314. Epub 2020 Oct 24. |
dc.identifier.issn.none.fl_str_mv |
0020-7136 |
dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/10495/31136 |
dc.identifier.doi.none.fl_str_mv |
10.1002/ijc.33314 |
dc.identifier.eissn.none.fl_str_mv |
1097-0215 |
identifier_str_mv |
Ramírez AT, Sánchez GI, Nedjai B, Agudelo MC, Brentnall AR, Cuschieri K, Castañeda KM, Cuzick J, Lorincz AT; ASC-US-COL Trial Group. Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country. Int J Cancer. 2021 Mar 15;148(6):1383-1393. doi: 10.1002/ijc.33314. Epub 2020 Oct 24. 0020-7136 10.1002/ijc.33314 1097-0215 |
url |
https://hdl.handle.net/10495/31136 |
dc.language.iso.spa.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Int. J. Cancer |
dc.rights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/2.5/co/ |
dc.rights.accessrights.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
dc.rights.creativecommons.spa.fl_str_mv |
https://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/2.5/co/ http://purl.org/coar/access_right/c_abf2 https://creativecommons.org/licenses/by-nc-nd/4.0/ |
dc.format.extent.spa.fl_str_mv |
11 |
dc.format.mimetype.spa.fl_str_mv |
application/pdf |
dc.publisher.spa.fl_str_mv |
Wiley |
dc.publisher.group.spa.fl_str_mv |
Infección y Cáncer Microbiología Ambiental |
dc.publisher.place.spa.fl_str_mv |
Nueva York, Estados Unidos |
institution |
Universidad de Antioquia |
bitstream.url.fl_str_mv |
https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/1/RamirezArianis_2021_Effective_Methylation_Triage.pdf https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/2/license_rdf https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/3/license.txt |
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MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositorio Institucional Universidad de Antioquia |
repository.mail.fl_str_mv |
andres.perez@udea.edu.co |
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1812173292886294528 |
spelling |
Ramírez Pineda, Arianis TatianaSánchez Vásquez, Gloria InésNedjai, BelindaAgudelo Fernández, María CeciliaBrentnall, AdamCuschieri, KateCastañeda Vanegas, Kelly MelisaCuzick, JackLorincz, Attila2022-10-07T17:49:48Z2022-10-07T17:49:48Z2020Ramírez AT, Sánchez GI, Nedjai B, Agudelo MC, Brentnall AR, Cuschieri K, Castañeda KM, Cuzick J, Lorincz AT; ASC-US-COL Trial Group. Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country. Int J Cancer. 2021 Mar 15;148(6):1383-1393. doi: 10.1002/ijc.33314. Epub 2020 Oct 24.0020-7136https://hdl.handle.net/10495/3113610.1002/ijc.333141097-0215ABSTRACT : The S5-methylation test, an alternative to cytology and HPV16/18 genotyping to triage high-risk HPV-positive (hrHPV+) women, has not been widely validated in lowmiddle-income countries (LMICs). We compared S5 to HPV16/18 and cytology to detect cervical intraepithelial neoplasia Grade 2 or worse (CIN2+) and CIN3+ in hrHPV + women selected from a randomized pragmatic trial of 2661 Colombian women with an earlier-borderline abnormal cytology. We included all hrHPV+ CIN2 and CIN3+ cases (n = 183) age matched to 183 <CIN2 hrHPV+. Baseline specimens were HPVgenotyped and tested by S5-methylation, blinded to cytology, histology and initial HPV results. We evaluated the test performance of predefined S5-classifier (cut-point 0.8) and a post hoc classifier at a different cut-point (3.1). S5 sensitivity for CIN2+ was 82% (95% confidence interval [CI] 76.4-87.5) and for CIN3+ 77.08% (95% CI 65.19-88.97). S5 sensitivity was higher than HPV16/18 sensitivity (48.1%, 95% CI 40.85-55.33) or cytology (31.21%, 95% CI 24.50-37.93) but with lower specificity (35%, 95% CI 28.1-42). At cut-point 3.1, S5 sensitivity for CIN2+ (55.2%, 95% CI 48-62.4) or CIN3+ (64.6%, 95% CI 51.0-78.1) was also superior to HPV16/18 (P < .05) or cytology (P < .0001). At this cut-point S5 specificity (76%, 95% CI 69.8-82.1 for <CIN2) was higher than HPV16/18 (67.21%, 95% CI 60.41-74.01, P = .0062) and similar to cytology (75.57%, 95% CI 69.34-81.79, P = 1). HPV16/18 plus cytology sensitivity was similar to S5 for CIN3+, however, false-positive rate was higher (50.27% vs.24.04%). High sensitivity is crucial in LMICs, S5-methylation exceeded HPV16/18 or cytology sensitivity with comparable specificity for CIN2+ and CIN3+ in hrHPV positive Colombian women. Furthermore, S5 triage had comparable sensitivity and significantly fewer false positives than cytology and HPV16/18 combination.COL0012328COL004018911application/pdfengWileyInfección y CáncerMicrobiología AmbientalNueva York, Estados Unidosinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-nd/4.0/Effective methylation triage of HPV positive women with abnormal cytology in a middle-income countryBiomarcadoresBiomarkersNeoplasias del Cuello UterinoUterine Cervical NeoplasmsMetilación de ADNDNA MethylationPruebas de ADN del Papillomavirus HumanoHuman Papillomavirus DNA TestsTriajeTriageInt. J. CancerInternational Journal of Cancer138313931486ORIGINALRamirezArianis_2021_Effective_Methylation_Triage.pdfRamirezArianis_2021_Effective_Methylation_Triage.pdfArtículo de investigaciónapplication/pdf709876https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/1/RamirezArianis_2021_Effective_Methylation_Triage.pdf2e11e392e12374e7f42fc5c41af52fa9MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/2/license_rdfb88b088d9957e670ce3b3fbe2eedbc13MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/31136oai:bibliotecadigital.udea.edu.co:10495/311362022-10-07 12:49:48.808Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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 |