Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country

ABSTRACT : The S5-methylation test, an alternative to cytology and HPV16/18 genotyping to triage high-risk HPV-positive (hrHPV+) women, has not been widely validated in lowmiddle-income countries (LMICs). We compared S5 to HPV16/18 and cytology to detect cervical intraepithelial neoplasia Grade 2 or...

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Autores:
Ramírez Pineda, Arianis Tatiana
Sánchez Vásquez, Gloria Inés
Nedjai, Belinda
Agudelo Fernández, María Cecilia
Brentnall, Adam
Cuschieri, Kate
Castañeda Vanegas, Kelly Melisa
Cuzick, Jack
Lorincz, Attila
Tipo de recurso:
Article of investigation
Fecha de publicación:
2020
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/31136
Acceso en línea:
https://hdl.handle.net/10495/31136
Palabra clave:
Biomarcadores
Biomarkers
Neoplasias del Cuello Uterino
Uterine Cervical Neoplasms
Metilación de ADN
DNA Methylation
Pruebas de ADN del Papillomavirus Humano
Human Papillomavirus DNA Tests
Triaje
Triage
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_2a499590ec179965ffff6d86e303d29d
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/31136
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
title Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
spellingShingle Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
Biomarcadores
Biomarkers
Neoplasias del Cuello Uterino
Uterine Cervical Neoplasms
Metilación de ADN
DNA Methylation
Pruebas de ADN del Papillomavirus Humano
Human Papillomavirus DNA Tests
Triaje
Triage
title_short Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
title_full Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
title_fullStr Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
title_full_unstemmed Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
title_sort Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country
dc.creator.fl_str_mv Ramírez Pineda, Arianis Tatiana
Sánchez Vásquez, Gloria Inés
Nedjai, Belinda
Agudelo Fernández, María Cecilia
Brentnall, Adam
Cuschieri, Kate
Castañeda Vanegas, Kelly Melisa
Cuzick, Jack
Lorincz, Attila
dc.contributor.author.none.fl_str_mv Ramírez Pineda, Arianis Tatiana
Sánchez Vásquez, Gloria Inés
Nedjai, Belinda
Agudelo Fernández, María Cecilia
Brentnall, Adam
Cuschieri, Kate
Castañeda Vanegas, Kelly Melisa
Cuzick, Jack
Lorincz, Attila
dc.subject.decs.none.fl_str_mv Biomarcadores
Biomarkers
Neoplasias del Cuello Uterino
Uterine Cervical Neoplasms
Metilación de ADN
DNA Methylation
Pruebas de ADN del Papillomavirus Humano
Human Papillomavirus DNA Tests
Triaje
Triage
topic Biomarcadores
Biomarkers
Neoplasias del Cuello Uterino
Uterine Cervical Neoplasms
Metilación de ADN
DNA Methylation
Pruebas de ADN del Papillomavirus Humano
Human Papillomavirus DNA Tests
Triaje
Triage
description ABSTRACT : The S5-methylation test, an alternative to cytology and HPV16/18 genotyping to triage high-risk HPV-positive (hrHPV+) women, has not been widely validated in lowmiddle-income countries (LMICs). We compared S5 to HPV16/18 and cytology to detect cervical intraepithelial neoplasia Grade 2 or worse (CIN2+) and CIN3+ in hrHPV + women selected from a randomized pragmatic trial of 2661 Colombian women with an earlier-borderline abnormal cytology. We included all hrHPV+ CIN2 and CIN3+ cases (n = 183) age matched to 183 <CIN2 hrHPV+. Baseline specimens were HPVgenotyped and tested by S5-methylation, blinded to cytology, histology and initial HPV results. We evaluated the test performance of predefined S5-classifier (cut-point 0.8) and a post hoc classifier at a different cut-point (3.1). S5 sensitivity for CIN2+ was 82% (95% confidence interval [CI] 76.4-87.5) and for CIN3+ 77.08% (95% CI 65.19-88.97). S5 sensitivity was higher than HPV16/18 sensitivity (48.1%, 95% CI 40.85-55.33) or cytology (31.21%, 95% CI 24.50-37.93) but with lower specificity (35%, 95% CI 28.1-42). At cut-point 3.1, S5 sensitivity for CIN2+ (55.2%, 95% CI 48-62.4) or CIN3+ (64.6%, 95% CI 51.0-78.1) was also superior to HPV16/18 (P < .05) or cytology (P < .0001). At this cut-point S5 specificity (76%, 95% CI 69.8-82.1 for <CIN2) was higher than HPV16/18 (67.21%, 95% CI 60.41-74.01, P = .0062) and similar to cytology (75.57%, 95% CI 69.34-81.79, P = 1). HPV16/18 plus cytology sensitivity was similar to S5 for CIN3+, however, false-positive rate was higher (50.27% vs.24.04%). High sensitivity is crucial in LMICs, S5-methylation exceeded HPV16/18 or cytology sensitivity with comparable specificity for CIN2+ and CIN3+ in hrHPV positive Colombian women. Furthermore, S5 triage had comparable sensitivity and significantly fewer false positives than cytology and HPV16/18 combination.
publishDate 2020
dc.date.issued.none.fl_str_mv 2020
dc.date.accessioned.none.fl_str_mv 2022-10-07T17:49:48Z
dc.date.available.none.fl_str_mv 2022-10-07T17:49:48Z
dc.type.spa.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.citation.spa.fl_str_mv Ramírez AT, Sánchez GI, Nedjai B, Agudelo MC, Brentnall AR, Cuschieri K, Castañeda KM, Cuzick J, Lorincz AT; ASC-US-COL Trial Group. Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country. Int J Cancer. 2021 Mar 15;148(6):1383-1393. doi: 10.1002/ijc.33314. Epub 2020 Oct 24.
dc.identifier.issn.none.fl_str_mv 0020-7136
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/31136
dc.identifier.doi.none.fl_str_mv 10.1002/ijc.33314
dc.identifier.eissn.none.fl_str_mv 1097-0215
identifier_str_mv Ramírez AT, Sánchez GI, Nedjai B, Agudelo MC, Brentnall AR, Cuschieri K, Castañeda KM, Cuzick J, Lorincz AT; ASC-US-COL Trial Group. Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country. Int J Cancer. 2021 Mar 15;148(6):1383-1393. doi: 10.1002/ijc.33314. Epub 2020 Oct 24.
0020-7136
10.1002/ijc.33314
1097-0215
url https://hdl.handle.net/10495/31136
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Int. J. Cancer
dc.rights.spa.fl_str_mv info:eu-repo/semantics/openAccess
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eu_rights_str_mv openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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dc.publisher.spa.fl_str_mv Wiley
dc.publisher.group.spa.fl_str_mv Infección y Cáncer
Microbiología Ambiental
dc.publisher.place.spa.fl_str_mv Nueva York, Estados Unidos
institution Universidad de Antioquia
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spelling Ramírez Pineda, Arianis TatianaSánchez Vásquez, Gloria InésNedjai, BelindaAgudelo Fernández, María CeciliaBrentnall, AdamCuschieri, KateCastañeda Vanegas, Kelly MelisaCuzick, JackLorincz, Attila2022-10-07T17:49:48Z2022-10-07T17:49:48Z2020Ramírez AT, Sánchez GI, Nedjai B, Agudelo MC, Brentnall AR, Cuschieri K, Castañeda KM, Cuzick J, Lorincz AT; ASC-US-COL Trial Group. Effective methylation triage of HPV positive women with abnormal cytology in a middle-income country. Int J Cancer. 2021 Mar 15;148(6):1383-1393. doi: 10.1002/ijc.33314. Epub 2020 Oct 24.0020-7136https://hdl.handle.net/10495/3113610.1002/ijc.333141097-0215ABSTRACT : The S5-methylation test, an alternative to cytology and HPV16/18 genotyping to triage high-risk HPV-positive (hrHPV+) women, has not been widely validated in lowmiddle-income countries (LMICs). We compared S5 to HPV16/18 and cytology to detect cervical intraepithelial neoplasia Grade 2 or worse (CIN2+) and CIN3+ in hrHPV + women selected from a randomized pragmatic trial of 2661 Colombian women with an earlier-borderline abnormal cytology. We included all hrHPV+ CIN2 and CIN3+ cases (n = 183) age matched to 183 <CIN2 hrHPV+. Baseline specimens were HPVgenotyped and tested by S5-methylation, blinded to cytology, histology and initial HPV results. We evaluated the test performance of predefined S5-classifier (cut-point 0.8) and a post hoc classifier at a different cut-point (3.1). S5 sensitivity for CIN2+ was 82% (95% confidence interval [CI] 76.4-87.5) and for CIN3+ 77.08% (95% CI 65.19-88.97). S5 sensitivity was higher than HPV16/18 sensitivity (48.1%, 95% CI 40.85-55.33) or cytology (31.21%, 95% CI 24.50-37.93) but with lower specificity (35%, 95% CI 28.1-42). At cut-point 3.1, S5 sensitivity for CIN2+ (55.2%, 95% CI 48-62.4) or CIN3+ (64.6%, 95% CI 51.0-78.1) was also superior to HPV16/18 (P < .05) or cytology (P < .0001). At this cut-point S5 specificity (76%, 95% CI 69.8-82.1 for <CIN2) was higher than HPV16/18 (67.21%, 95% CI 60.41-74.01, P = .0062) and similar to cytology (75.57%, 95% CI 69.34-81.79, P = 1). HPV16/18 plus cytology sensitivity was similar to S5 for CIN3+, however, false-positive rate was higher (50.27% vs.24.04%). High sensitivity is crucial in LMICs, S5-methylation exceeded HPV16/18 or cytology sensitivity with comparable specificity for CIN2+ and CIN3+ in hrHPV positive Colombian women. Furthermore, S5 triage had comparable sensitivity and significantly fewer false positives than cytology and HPV16/18 combination.COL0012328COL004018911application/pdfengWileyInfección y CáncerMicrobiología AmbientalNueva York, Estados Unidosinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTArtículo de investigaciónhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/http://purl.org/coar/access_right/c_abf2https://creativecommons.org/licenses/by-nc-nd/4.0/Effective methylation triage of HPV positive women with abnormal cytology in a middle-income countryBiomarcadoresBiomarkersNeoplasias del Cuello UterinoUterine Cervical NeoplasmsMetilación de ADNDNA MethylationPruebas de ADN del Papillomavirus HumanoHuman Papillomavirus DNA TestsTriajeTriageInt. J. CancerInternational Journal of Cancer138313931486ORIGINALRamirezArianis_2021_Effective_Methylation_Triage.pdfRamirezArianis_2021_Effective_Methylation_Triage.pdfArtículo de investigaciónapplication/pdf709876https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/1/RamirezArianis_2021_Effective_Methylation_Triage.pdf2e11e392e12374e7f42fc5c41af52fa9MD51CC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/2/license_rdfb88b088d9957e670ce3b3fbe2eedbc13MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstream/10495/31136/3/license.txt8a4605be74aa9ea9d79846c1fba20a33MD5310495/31136oai:bibliotecadigital.udea.edu.co:10495/311362022-10-07 12:49:48.808Repositorio Institucional Universidad de Antioquiaandres.perez@udea.edu.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